FFCP PHASE1:Mm9::chr15:89204365..89204392,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:89204365..89204392,+ | |||
|description=CAGE_peak_at_chr15:89204365..89204392,+ | |description=CAGE_peak_at_chr15:89204365..89204392,+ | ||
|id=chr15:89204365..89204392,+ | |id=chr15:89204365..89204392,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.75e-07!25 | |ontology_enrichment_celltype=CL:0000066!3.75e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.57e-12,25;CL:0000223,7.19e-11,20;CL:0002563,4.47e-10,9;CL:0002251,4.47e-10,9;CL:0000239,2.64e-07,6;CL:0000677,2.64e-07,6;CL:0000584,2.64e-07,6;CL:0000182,6.23e-07,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.16e-09!15;UBERON:0000160!3.73e-09!43;UBERON:0001242!2.73e-08!13;UBERON:0000060!2.73e-08!13;UBERON:0001262!2.73e-08!13;UBERON:0004786!2.73e-08!13 | |ontology_enrichment_uberon=UBERON:0000344!2.16e-09!15;UBERON:0000160!3.73e-09!43;UBERON:0001242!2.73e-08!13;UBERON:0000060!2.73e-08!13;UBERON:0001262!2.73e-08!13;UBERON:0004786!2.73e-08!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.97e-20,31;UBERON:0000344,4.12e-16,15;UBERON:0001242,4.54e-14,13;UBERON:0001262,4.54e-14,13;UBERON:0004786,4.54e-14,13;UBERON:0005409,2.00e-11,47;UBERON:0004923,1.21e-10,24;UBERON:0003350,4.47e-10,9;UBERON:0004808,4.47e-10,9;UBERON:0001277,4.47e-10,9;UBERON:0000485,8.26e-08,11;UBERON:0004119,9.29e-08,118;UBERON:0000925,9.29e-08,118;UBERON:0006595,9.29e-08,118;UBERON:0001007,1.38e-07,116;UBERON:0001555,1.38e-07,116;UBERON:0007026,1.38e-07,116 | |||
|phase1_expression=0.640595388419176,2.44282785347553,1.81999695755814,2.72217790176147,2.50447864973174,2.01455126294268,2.33612640595526,1.03298658753261,0.563154888606667,0.468129052643987,0.513653904676515,0.558405112967355,0.513602189793617,0.262261207256992,0.333109761815663,0,0,0,0.137114433605739,0,11.4808441703944,0.0992909512008853,0.261199789138935,1.91990907352088,2.75291137280604,1.72269589234506,3.87685796543167,1.29282739611533,3.80046838912748,3.2763916868791,1.10865255327652,1.27006134691926,1.23012957516914,0,2.3108129580102,1.82858109894342,2.45003227514843,0,0,0,0,0,0,1.1330713617802,1.11514624341466,2.56965453026354,3.12956537739216,0.436050312760893,0.659058548203415,0,0.839918529752175,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,1.5869729378161,0,1.0165335962074,2.66788438833342,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.135005938331691,0.630974884054146,0.571301968807607,0.662605622854841,0.244981598429908,0.287536413054709,0,1.10115880999389,0.766124028511126,0.307213066512487,0.527545150920775,0.823388792421687,0,0,0.56276261003168,0.45839474333043,0.883885756421003,0.996601765593721,0.559198337475902,0.227178579999552,0,2.6087803983151,0.860423876981386,2.719885334831,4.85732872474035,3.89865850468601,1.79210754838934,1.54488862144927,0.340860645156116,0.259786004602869,0,0.281686839553361,1.28326477414318,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.68510327831436,0.258937883647172,0.29688427812965,0.346970653532272,0.913396434936424,0.230615497256059,0.60289056221049,0.23517741427141,0.376999773989026,1.48316980640624,0.722996784599558,0,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,1.46390398505774,0.41889341362691,2.55457055208591,0.359445373517761,0.599902730993408,0.127070227073065,0.748953197024114,0.457500602818626,0.628271760564322,0,1.02286182932132,0.41557608911912,0,0.101839363850316,0.373220911830279,1.0108910337347,0.210441855886474,0.650602214813519,0.229902104433473,0,0.30140963567143,0.272145996605311,0.384341160854549,0.562210347358373,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0.205782136407943,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.234526059981096,1.2604344302271,0.710234206755631,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.493679549740441,0.164167464079095,0.648550476366846,0.292399974850665,0.658650345873152,0,1.47202963994889,0.514523061896422,2.97376904685418,2.90895623329899,0.426576501070468,0.464473343720877,0.515469845288373,0.403367049246685,1.33426826306922,1.71203063501303,3.32170343081158,1.64698954724011,1.00534083520108,1.39269530428806,0.779856348476481,2.69645822596266,2.37751854862164,2.98711909881551,0.758671603812327,0.342745537829186,0,0.407302655690628,0.193952487167626,0.701358198903186,1.07502113111237,1.32849133181642,0.627994911365499,0.987177311374404,0.592905254174298,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.863088412352432,2.7562988551756,2.47105271869273,0,1.86070473834252,1.87222603868736,2.52578877947112,1.79397413521912,1.4473305640901,0,0.568474235311454,0,0,0.469380496577004,0.670025029767263,0.238043640886014,0.780534591431195,0.157635144106191,0.221464689648775,1.11618338060241,0.327726629431476,0.345369963731791,0,1.50791283939272,0,0.983528546038072,0.551873492609465,0,0.820481806145422,0.983609672260053,0.252470927204373,0.631016438832513,0,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,1.16902343164525,1.18586333383957,0.321321316421807,0.709700426041343,1.06839362200353,0.651547837414304,0.329940245945071,0,0.485561272309963,0.604647113929502,0.565815239267694,0.885905678642318,0.307435147943927,1.80899805217755,0.363533729477506,0,0.632073515871632,0,0,1.02131881726136,0.18006109403131,0.776152102696527,1.92903331528433,0.886701168211368,0.713475270408282,1.81003922662333,1.8267896946876,0,1.0591603543191,0,0,0,0.241251699712623,0.238744688006273,0.492422699235184,1.1659233465194,0.741701208042039,0.341741761595705,0.82554747185289,0,0.188368457004691,0,0.228778173206523,1.01987057996313,1.39951452323658,0.829199842826543,0,0.316335993581135,0.203319467126849,0.432021363287205,0,0.655087691238533,0.404593039154462,0.826534557253359,0.785267825952089,1.68499465279331,0.621339313086926,95.2641066376282,0.149516546043979,0.165458490457098,1.16670713006429,0.516639293910924,0.506868376472335,0.352071715937262,0.39061315453185,0.524296722128554,14.0118790079084,42.916470932422,0.632022241256357,0.810900861160657,0.821687657318618,0.25984164595559,0,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0.302478555410522,0.194915761479505,0.962118416403295,0.701261413089414,0,0,0.179427713218951,0,0.579568782096571,1.31377732815827,0.183151624267265,0.214368379079066,0,2.25900737046827,0.460325236507177,0,0.515559547031063,0,0,0,0.45032120322422,0,0,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| |phase1_expression=0.640595388419176,2.44282785347553,1.81999695755814,2.72217790176147,2.50447864973174,2.01455126294268,2.33612640595526,1.03298658753261,0.563154888606667,0.468129052643987,0.513653904676515,0.558405112967355,0.513602189793617,0.262261207256992,0.333109761815663,0,0,0,0.137114433605739,0,11.4808441703944,0.0992909512008853,0.261199789138935,1.91990907352088,2.75291137280604,1.72269589234506,3.87685796543167,1.29282739611533,3.80046838912748,3.2763916868791,1.10865255327652,1.27006134691926,1.23012957516914,0,2.3108129580102,1.82858109894342,2.45003227514843,0,0,0,0,0,0,1.1330713617802,1.11514624341466,2.56965453026354,3.12956537739216,0.436050312760893,0.659058548203415,0,0.839918529752175,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,1.5869729378161,0,1.0165335962074,2.66788438833342,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.135005938331691,0.630974884054146,0.571301968807607,0.662605622854841,0.244981598429908,0.287536413054709,0,1.10115880999389,0.766124028511126,0.307213066512487,0.527545150920775,0.823388792421687,0,0,0.56276261003168,0.45839474333043,0.883885756421003,0.996601765593721,0.559198337475902,0.227178579999552,0,2.6087803983151,0.860423876981386,2.719885334831,4.85732872474035,3.89865850468601,1.79210754838934,1.54488862144927,0.340860645156116,0.259786004602869,0,0.281686839553361,1.28326477414318,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.68510327831436,0.258937883647172,0.29688427812965,0.346970653532272,0.913396434936424,0.230615497256059,0.60289056221049,0.23517741427141,0.376999773989026,1.48316980640624,0.722996784599558,0,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,1.46390398505774,0.41889341362691,2.55457055208591,0.359445373517761,0.599902730993408,0.127070227073065,0.748953197024114,0.457500602818626,0.628271760564322,0,1.02286182932132,0.41557608911912,0,0.101839363850316,0.373220911830279,1.0108910337347,0.210441855886474,0.650602214813519,0.229902104433473,0,0.30140963567143,0.272145996605311,0.384341160854549,0.562210347358373,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0.205782136407943,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.234526059981096,1.2604344302271,0.710234206755631,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.493679549740441,0.164167464079095,0.648550476366846,0.292399974850665,0.658650345873152,0,1.47202963994889,0.514523061896422,2.97376904685418,2.90895623329899,0.426576501070468,0.464473343720877,0.515469845288373,0.403367049246685,1.33426826306922,1.71203063501303,3.32170343081158,1.64698954724011,1.00534083520108,1.39269530428806,0.779856348476481,2.69645822596266,2.37751854862164,2.98711909881551,0.758671603812327,0.342745537829186,0,0.407302655690628,0.193952487167626,0.701358198903186,1.07502113111237,1.32849133181642,0.627994911365499,0.987177311374404,0.592905254174298,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.863088412352432,2.7562988551756,2.47105271869273,0,1.86070473834252,1.87222603868736,2.52578877947112,1.79397413521912,1.4473305640901,0,0.568474235311454,0,0,0.469380496577004,0.670025029767263,0.238043640886014,0.780534591431195,0.157635144106191,0.221464689648775,1.11618338060241,0.327726629431476,0.345369963731791,0,1.50791283939272,0,0.983528546038072,0.551873492609465,0,0.820481806145422,0.983609672260053,0.252470927204373,0.631016438832513,0,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,1.16902343164525,1.18586333383957,0.321321316421807,0.709700426041343,1.06839362200353,0.651547837414304,0.329940245945071,0,0.485561272309963,0.604647113929502,0.565815239267694,0.885905678642318,0.307435147943927,1.80899805217755,0.363533729477506,0,0.632073515871632,0,0,1.02131881726136,0.18006109403131,0.776152102696527,1.92903331528433,0.886701168211368,0.713475270408282,1.81003922662333,1.8267896946876,0,1.0591603543191,0,0,0,0.241251699712623,0.238744688006273,0.492422699235184,1.1659233465194,0.741701208042039,0.341741761595705,0.82554747185289,0,0.188368457004691,0,0.228778173206523,1.01987057996313,1.39951452323658,0.829199842826543,0,0.316335993581135,0.203319467126849,0.432021363287205,0,0.655087691238533,0.404593039154462,0.826534557253359,0.785267825952089,1.68499465279331,0.621339313086926,95.2641066376282,0.149516546043979,0.165458490457098,1.16670713006429,0.516639293910924,0.506868376472335,0.352071715937262,0.39061315453185,0.524296722128554,14.0118790079084,42.916470932422,0.632022241256357,0.810900861160657,0.821687657318618,0.25984164595559,0,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0.302478555410522,0.194915761479505,0.962118416403295,0.701261413089414,0,0,0.179427713218951,0,0.579568782096571,1.31377732815827,0.183151624267265,0.214368379079066,0,2.25900737046827,0.460325236507177,0,0.515559547031063,0,0,0,0.45032120322422,0,0,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| ||
|short_description=p@chr15:89204365..89204392,+ | |short_description=p@chr15:89204365..89204392,+ | ||
}} | }} |
Latest revision as of 20:08, 5 August 2015
Short description: | p@chr15:89204365..89204392, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:89204365..89204392, + |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.57e-12 | 25 |
endodermal cell | 7.19e-11 | 20 |
intestinal epithelial cell | 4.47e-10 | 9 |
epithelial cell of alimentary canal | 4.47e-10 | 9 |
brush border epithelial cell | 2.64e-07 | 6 |
gut absorptive cell | 2.64e-07 | 6 |
enterocyte | 2.64e-07 | 6 |
hepatocyte | 6.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.97e-20 | 31 |
mucosa | 4.12e-16 | 15 |
intestinal mucosa | 4.54e-14 | 13 |
wall of intestine | 4.54e-14 | 13 |
gastrointestinal system mucosa | 4.54e-14 | 13 |
gastrointestinal system | 2.00e-11 | 47 |
organ component layer | 1.21e-10 | 24 |
epithelium of mucosa | 4.47e-10 | 9 |
gastrointestinal system epithelium | 4.47e-10 | 9 |
intestinal epithelium | 4.47e-10 | 9 |
simple columnar epithelium | 8.26e-08 | 11 |
endoderm-derived structure | 9.29e-08 | 118 |
endoderm | 9.29e-08 | 118 |
presumptive endoderm | 9.29e-08 | 118 |
digestive system | 1.38e-07 | 116 |
digestive tract | 1.38e-07 | 116 |
primitive gut | 1.38e-07 | 116 |