FFCP PHASE1:Mm9::chr18:47271791..47271803,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:47271791..47271803,+
|short_description=p@chr18:47271791..47271803,+
|description=CAGE_peak_at_chr18:47271791..47271803,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2694 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:47271791..47271803,+ | |||
|description=CAGE_peak_at_chr18:47271791..47271803,+ | |||
|id=chr18:47271791..47271803,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.33e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.21e-12!49;UBERON:0005173!3.21e-12!49;UBERON:0002417!3.21e-12!49;UBERON:0000916!3.21e-12!49;UBERON:0000160!1.73e-10!43;UBERON:0002107!2.73e-10!22;UBERON:0007499!2.73e-10!22;UBERON:0006925!2.73e-10!22;UBERON:0009497!2.73e-10!22;UBERON:0000015!2.73e-10!22;UBERON:0002423!2.73e-10!22;UBERON:0006235!2.73e-10!22;UBERON:0008835!2.73e-10!22;UBERON:0003894!2.73e-10!22;UBERON:0004161!2.73e-10!22;UBERON:0008836!2.73e-10!22;UBERON:0005409!1.53e-09!59;UBERON:0009854!4.29e-09!23;UBERON:0009856!4.29e-09!23;UBERON:0000344!3.86e-08!15;UBERON:0002365!1.74e-07!25;UBERON:0002330!1.74e-07!25;UBERON:0001242!3.85e-07!13;UBERON:0000060!3.85e-07!13;UBERON:0001262!3.85e-07!13;UBERON:0004786!3.85e-07!13;UBERON:0005177!4.08e-07!85;UBERON:0003914!5.41e-07!47;UBERON:0009569!7.86e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.05e-13,49;UBERON:0005173,3.05e-13,49;UBERON:0002417,3.05e-13,49;UBERON:0000916,3.05e-13,49;UBERON:0002107,4.48e-11,22;UBERON:0007499,4.48e-11,22;UBERON:0006925,4.48e-11,22;UBERON:0009497,4.48e-11,22;UBERON:0000015,4.48e-11,22;UBERON:0002423,4.48e-11,22;UBERON:0006235,4.48e-11,22;UBERON:0008835,4.48e-11,22;UBERON:0003894,4.48e-11,22;UBERON:0004161,4.48e-11,22;UBERON:0008836,4.48e-11,22;UBERON:0000160,5.04e-11,31;UBERON:0009854,4.32e-10,23;UBERON:0009856,4.32e-10,23;UBERON:0000344,9.84e-09,15;UBERON:0005409,1.02e-08,47;UBERON:0002365,2.11e-08,25;UBERON:0002330,2.11e-08,25;UBERON:0005177,2.63e-08,79;UBERON:0001242,1.20e-07,13;UBERON:0001262,1.20e-07,13;UBERON:0004786,1.20e-07,13;UBERON:0003104,1.35e-07,61;UBERON:0009142,1.35e-07,61;UBERON:0009569,1.60e-07,66;UBERON:0003914,1.89e-07,47 | |||
|phase1_expression=2.08193501236232,7.67745896806594,3.63999391511629,2.72217790176147,3.00537437967808,15.4448930158939,8.41005506143892,0.387369970324729,2.67498572088167,1.63845168425395,1.54096171402954,6.30200056063158,0.171200729931206,0.0874204024189974,1.66554880907831,2.63217847606774,0,0.157731082679119,0.137114433605739,0.42438965179803,3.31668831589172,0.794327609607082,2.87319768052829,11.3594620183319,10.782236210157,19.5238867799107,12.4920978886132,16.3758136841276,6.08074942260396,14.8697776558359,9.5344119581781,0.635030673459631,0,0,28.3074587356249,49.2054550261137,34.5046212083404,0,0,0,0,0,0,1.6366586336825,1.52065396829272,1.46837401729345,0.782391344348039,0.436050312760893,0.878744730937887,0.194429899074283,0.139986421625363,0,1.34226084846189,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0.606949382578793,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,1.34796496001021,0.540023753326763,0,1.71390590642282,1.10434270475807,0.367472397644862,0.383381884072945,0,0,1.91531007127782,1.38245879930619,0.131886287730194,0.274462930807229,0,1.95428099300967,2.25105044012672,1.68078072554491,0.589257170947335,0.711858403995515,1.4911955666024,8.32988126665025,3.6274348851257,3.18850937571846,20.6501730475533,23.1190253460635,24.8263468153396,25.9910566979068,25.5375325645481,2.10666630197628,3.06774580640504,1.03914401841148,2.12003744706204,3.52108549441701,0,0,0,1.73192832808971,1.77351905832569,1.01104889002957,20.7814661088689,0,5.64080128446334,8.15381035800839,13.0920155674221,13.3756988408514,24.2663451289722,12.1116368349776,10.3046604890334,0,3.32578520915797,0.884610551949874,0.808834249737046,0.662524555381181,0.969750506270444,0,0.585561594023094,0.41889341362691,2.04365644166873,5.27186547826049,1.19980546198682,11.817531117795,0.599162557619291,0.457500602818626,0.251308704225729,0.521472960576829,0.511430914660661,0.83115217823824,0.973447578406546,1.01839363850316,0.622034853050465,0,0.420883711772948,1.69156575851515,0.919608417733892,0.180062129805349,0.753524089178575,0.748401490664606,1.40925092313335,0.749613796477831,0.517406741478031,1.07783996466421,0.189106080167819,1.05570674498369,0.43839146485515,0.834141747676794,0.348252166522167,0,2.58744546864041,0,0.51469581422943,2.84163499395593,1.44988040774851,2.57978665979206,1.08037236876609,0.710234206755631,1.18058539048442,2.77680803197281,3.25547522650571,2.95100741539581,1.63471479314037,3.12663714835613,4.92502392237286,1.94565142910054,3.07019973593198,1.09775057645525,2.01309628140558,0.630869845692382,0.617427674275707,3.96502539580558,4.49565963328025,2.34617075588757,2.32236671860439,2.31961430379768,3.42861991859682,3.33567065767305,5.70676878337677,6.16887780007865,3.29397909448022,7.28872105520782,6.16765063327568,6.23885078781184,0,9.72621224436124,6.96994456390285,1.32767530667157,4.11294645395024,1.1270773567308,2.44381593414377,5.04276466635827,5.40045813155453,7.20896523216533,13.4325234661438,18.9968460688064,11.105744752962,12.4510103376603,1.50160595144485,2.55526693647164,1.79889689907883,1.82574109249653,3.37648023653384,4.58326533206556,3.16465751195892,19.9426328933294,23.612281534175,18.6898668485561,12.6527922207291,14.6657706363843,17.9331003342449,16.6839594575378,14.9557491622644,0.184753190166605,2.27389694124582,0.651859905768103,1.86719594352707,0.704070744865506,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,1.38147985492716,0.144649058581512,0,1.63171705145613,0,0.551873492609465,0.321101179975584,0.820481806145422,5.08198330667694,2.27223834483936,3.15508219416257,2.34263246577983,2.15423397732799,1.19484398976276,0.222798674082394,1.69845918473299,1.21443210502468,1.75353514746787,0.790575555893047,0,0.425820255624806,1.06839362200353,0.488660878060728,0.329940245945071,1.32745138339963,2.91336763385978,1.51161778482376,3.20628635585027,1.18120757152309,0.922305443831782,3.35956781118687,1.81766864738753,3.20847640546249,3.47640433729398,4.21674434299995,2.06271086496374,0,2.34079422240703,0.646793418913773,1.07168517515796,0.354680467284547,0,0.987294123612726,0.304464949114599,0.704015124191131,0.42366414172764,0,0.32977250588296,0,0.482503399425247,0.477489376012546,0.492422699235184,7.86998258900597,1.11255181206306,1.36696704638282,1.23832120777933,1.11116716421827,1.88368457004691,1.0935538217682,0.686334519619568,2.03974115992626,2.09927178485487,2.9021994498929,0.954670618015114,0.632671987162271,1.21991680276109,3.24016022465404,1.67270636811575,1.9652630737156,2.02296519577231,1.73572257023205,1.57053565190418,4.01806417204558,0,0,1.34564891439581,3.47462829959905,4.083474955225,5.42471258606471,4.05494701177868,0.821500670520278,2.8644964665669,1.8874681996628,1.69108884578204,0.576060012515731,0,2.02725215290164,1.43795340030758,1.55904987573354,0,0,0.360586348559907,0.147689527174577,0.302899349844443,0.304827226619999,0.100826185136841,0.0974578807397524,0.481059208201647,0.584384510907845,0,1.55390167361845,11.8422290724508,2.68615386182526,0,0.187682475451182,0.549454872801795,0.857473516316263,0,0.564751842617067,0,0.572895513439397,0.859265911718438,0,0.755393897389701,0,0,0.906284817968409,0,4.4628559461196,0.798049746802062,1.02440163452481,0.486213434136588,1.67690530102386,2.75765262675021,1.77797382241292,0.412070114477788,1.60459604795908,2.02157769411038,1.77435509923168,1.13175804831646,4.02658482120494,3.90553429669703,5.22662767496081,1.90517476513229,1.50649623728312,2.12200142510076,0.824171801606613,0.294397840268795,0.342869252385415,1.95223386775271,4.76872379894642,1.59881058295561,0.564656282491984,3.9768865709088,1.64635175585495,1.05227884575137,4.6173398707593,0.561142271657738,0.237270036248348,3.94017929502254,0.409231043169689,4.95797891795091,2.12197272079256,0.499621155875892,1.63752125911786,1.71896843238639,1.14772999241306,0.441182838239031,0.695603506861264 | |phase1_expression=2.08193501236232,7.67745896806594,3.63999391511629,2.72217790176147,3.00537437967808,15.4448930158939,8.41005506143892,0.387369970324729,2.67498572088167,1.63845168425395,1.54096171402954,6.30200056063158,0.171200729931206,0.0874204024189974,1.66554880907831,2.63217847606774,0,0.157731082679119,0.137114433605739,0.42438965179803,3.31668831589172,0.794327609607082,2.87319768052829,11.3594620183319,10.782236210157,19.5238867799107,12.4920978886132,16.3758136841276,6.08074942260396,14.8697776558359,9.5344119581781,0.635030673459631,0,0,28.3074587356249,49.2054550261137,34.5046212083404,0,0,0,0,0,0,1.6366586336825,1.52065396829272,1.46837401729345,0.782391344348039,0.436050312760893,0.878744730937887,0.194429899074283,0.139986421625363,0,1.34226084846189,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0.606949382578793,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,1.34796496001021,0.540023753326763,0,1.71390590642282,1.10434270475807,0.367472397644862,0.383381884072945,0,0,1.91531007127782,1.38245879930619,0.131886287730194,0.274462930807229,0,1.95428099300967,2.25105044012672,1.68078072554491,0.589257170947335,0.711858403995515,1.4911955666024,8.32988126665025,3.6274348851257,3.18850937571846,20.6501730475533,23.1190253460635,24.8263468153396,25.9910566979068,25.5375325645481,2.10666630197628,3.06774580640504,1.03914401841148,2.12003744706204,3.52108549441701,0,0,0,1.73192832808971,1.77351905832569,1.01104889002957,20.7814661088689,0,5.64080128446334,8.15381035800839,13.0920155674221,13.3756988408514,24.2663451289722,12.1116368349776,10.3046604890334,0,3.32578520915797,0.884610551949874,0.808834249737046,0.662524555381181,0.969750506270444,0,0.585561594023094,0.41889341362691,2.04365644166873,5.27186547826049,1.19980546198682,11.817531117795,0.599162557619291,0.457500602818626,0.251308704225729,0.521472960576829,0.511430914660661,0.83115217823824,0.973447578406546,1.01839363850316,0.622034853050465,0,0.420883711772948,1.69156575851515,0.919608417733892,0.180062129805349,0.753524089178575,0.748401490664606,1.40925092313335,0.749613796477831,0.517406741478031,1.07783996466421,0.189106080167819,1.05570674498369,0.43839146485515,0.834141747676794,0.348252166522167,0,2.58744546864041,0,0.51469581422943,2.84163499395593,1.44988040774851,2.57978665979206,1.08037236876609,0.710234206755631,1.18058539048442,2.77680803197281,3.25547522650571,2.95100741539581,1.63471479314037,3.12663714835613,4.92502392237286,1.94565142910054,3.07019973593198,1.09775057645525,2.01309628140558,0.630869845692382,0.617427674275707,3.96502539580558,4.49565963328025,2.34617075588757,2.32236671860439,2.31961430379768,3.42861991859682,3.33567065767305,5.70676878337677,6.16887780007865,3.29397909448022,7.28872105520782,6.16765063327568,6.23885078781184,0,9.72621224436124,6.96994456390285,1.32767530667157,4.11294645395024,1.1270773567308,2.44381593414377,5.04276466635827,5.40045813155453,7.20896523216533,13.4325234661438,18.9968460688064,11.105744752962,12.4510103376603,1.50160595144485,2.55526693647164,1.79889689907883,1.82574109249653,3.37648023653384,4.58326533206556,3.16465751195892,19.9426328933294,23.612281534175,18.6898668485561,12.6527922207291,14.6657706363843,17.9331003342449,16.6839594575378,14.9557491622644,0.184753190166605,2.27389694124582,0.651859905768103,1.86719594352707,0.704070744865506,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,1.38147985492716,0.144649058581512,0,1.63171705145613,0,0.551873492609465,0.321101179975584,0.820481806145422,5.08198330667694,2.27223834483936,3.15508219416257,2.34263246577983,2.15423397732799,1.19484398976276,0.222798674082394,1.69845918473299,1.21443210502468,1.75353514746787,0.790575555893047,0,0.425820255624806,1.06839362200353,0.488660878060728,0.329940245945071,1.32745138339963,2.91336763385978,1.51161778482376,3.20628635585027,1.18120757152309,0.922305443831782,3.35956781118687,1.81766864738753,3.20847640546249,3.47640433729398,4.21674434299995,2.06271086496374,0,2.34079422240703,0.646793418913773,1.07168517515796,0.354680467284547,0,0.987294123612726,0.304464949114599,0.704015124191131,0.42366414172764,0,0.32977250588296,0,0.482503399425247,0.477489376012546,0.492422699235184,7.86998258900597,1.11255181206306,1.36696704638282,1.23832120777933,1.11116716421827,1.88368457004691,1.0935538217682,0.686334519619568,2.03974115992626,2.09927178485487,2.9021994498929,0.954670618015114,0.632671987162271,1.21991680276109,3.24016022465404,1.67270636811575,1.9652630737156,2.02296519577231,1.73572257023205,1.57053565190418,4.01806417204558,0,0,1.34564891439581,3.47462829959905,4.083474955225,5.42471258606471,4.05494701177868,0.821500670520278,2.8644964665669,1.8874681996628,1.69108884578204,0.576060012515731,0,2.02725215290164,1.43795340030758,1.55904987573354,0,0,0.360586348559907,0.147689527174577,0.302899349844443,0.304827226619999,0.100826185136841,0.0974578807397524,0.481059208201647,0.584384510907845,0,1.55390167361845,11.8422290724508,2.68615386182526,0,0.187682475451182,0.549454872801795,0.857473516316263,0,0.564751842617067,0,0.572895513439397,0.859265911718438,0,0.755393897389701,0,0,0.906284817968409,0,4.4628559461196,0.798049746802062,1.02440163452481,0.486213434136588,1.67690530102386,2.75765262675021,1.77797382241292,0.412070114477788,1.60459604795908,2.02157769411038,1.77435509923168,1.13175804831646,4.02658482120494,3.90553429669703,5.22662767496081,1.90517476513229,1.50649623728312,2.12200142510076,0.824171801606613,0.294397840268795,0.342869252385415,1.95223386775271,4.76872379894642,1.59881058295561,0.564656282491984,3.9768865709088,1.64635175585495,1.05227884575137,4.6173398707593,0.561142271657738,0.237270036248348,3.94017929502254,0.409231043169689,4.95797891795091,2.12197272079256,0.499621155875892,1.63752125911786,1.71896843238639,1.14772999241306,0.441182838239031,0.695603506861264 | ||
|short_description=p@chr18:47271791..47271803,+ | |||
}} | }} |
Latest revision as of 20:24, 5 August 2015
Short description: | p@chr18:47271791..47271803, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:47271791..47271803, + |
Coexpression cluster: | MCL_coexpression_mm9:2694 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.33e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 3.05e-13 | 49 |
abdominal segment element | 3.05e-13 | 49 |
abdominal segment of trunk | 3.05e-13 | 49 |
abdomen | 3.05e-13 | 49 |
liver | 4.48e-11 | 22 |
epithelial sac | 4.48e-11 | 22 |
digestive gland | 4.48e-11 | 22 |
epithelium of foregut-midgut junction | 4.48e-11 | 22 |
anatomical boundary | 4.48e-11 | 22 |
hepatobiliary system | 4.48e-11 | 22 |
foregut-midgut junction | 4.48e-11 | 22 |
hepatic diverticulum | 4.48e-11 | 22 |
liver primordium | 4.48e-11 | 22 |
septum transversum | 4.48e-11 | 22 |
liver bud | 4.48e-11 | 22 |
intestine | 5.04e-11 | 31 |
digestive tract diverticulum | 4.32e-10 | 23 |
sac | 4.32e-10 | 23 |
mucosa | 9.84e-09 | 15 |
gastrointestinal system | 1.02e-08 | 47 |
exocrine gland | 2.11e-08 | 25 |
exocrine system | 2.11e-08 | 25 |
trunk region element | 2.63e-08 | 79 |
intestinal mucosa | 1.20e-07 | 13 |
wall of intestine | 1.20e-07 | 13 |
gastrointestinal system mucosa | 1.20e-07 | 13 |
mesenchyme | 1.35e-07 | 61 |
entire embryonic mesenchyme | 1.35e-07 | 61 |
subdivision of trunk | 1.60e-07 | 66 |
epithelial tube | 1.89e-07 | 47 |