FFCP PHASE1:Mm9::chr3:107815477..107815490,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1192 | |MCL_coexpression_id=1192 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:107815477..107815490,- | |||
|description=CAGE_peak_at_chr3:107815477..107815490,- | |description=CAGE_peak_at_chr3:107815477..107815490,- | ||
|id=chr3:107815477..107815490,- | |id=chr3:107815477..107815490,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.26e-14,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!9.49e-12!79;UBERON:0005256!6.54e-11!47;UBERON:0005172!1.13e-10!49;UBERON:0005173!1.13e-10!49;UBERON:0002417!1.13e-10!49;UBERON:0000916!1.13e-10!49;UBERON:0009854!1.22e-09!23;UBERON:0009856!1.22e-09!23;UBERON:0003135!5.78e-09!15;UBERON:0002107!7.43e-09!22;UBERON:0007499!7.43e-09!22;UBERON:0006925!7.43e-09!22;UBERON:0009497!7.43e-09!22;UBERON:0000015!7.43e-09!22;UBERON:0002423!7.43e-09!22;UBERON:0006235!7.43e-09!22;UBERON:0008835!7.43e-09!22;UBERON:0003894!7.43e-09!22;UBERON:0004161!7.43e-09!22;UBERON:0008836!7.43e-09!22;UBERON:0009569!1.95e-08!66;UBERON:0000473!2.34e-08!14;UBERON:0003101!4.25e-08!16;UBERON:0000079!4.25e-08!16;UBERON:0005177!7.75e-08!85;UBERON:0002100!8.86e-08!98;UBERON:0000991!1.15e-07!18;UBERON:0005564!1.15e-07!18;UBERON:0003914!1.40e-07!47;UBERON:0002365!4.62e-07!25;UBERON:0002330!4.62e-07!25;UBERON:0000926!5.20e-07!193;UBERON:0004120!5.20e-07!193;UBERON:0006603!5.20e-07!193;UBERON:0004176!5.66e-07!17;UBERON:0009196!5.66e-07!17;UBERON:0009117!5.66e-07!17;UBERON:0003886!1.00e-06!38 | |ontology_enrichment_uberon=UBERON:0000466!9.49e-12!79;UBERON:0005256!6.54e-11!47;UBERON:0005172!1.13e-10!49;UBERON:0005173!1.13e-10!49;UBERON:0002417!1.13e-10!49;UBERON:0000916!1.13e-10!49;UBERON:0009854!1.22e-09!23;UBERON:0009856!1.22e-09!23;UBERON:0003135!5.78e-09!15;UBERON:0002107!7.43e-09!22;UBERON:0007499!7.43e-09!22;UBERON:0006925!7.43e-09!22;UBERON:0009497!7.43e-09!22;UBERON:0000015!7.43e-09!22;UBERON:0002423!7.43e-09!22;UBERON:0006235!7.43e-09!22;UBERON:0008835!7.43e-09!22;UBERON:0003894!7.43e-09!22;UBERON:0004161!7.43e-09!22;UBERON:0008836!7.43e-09!22;UBERON:0009569!1.95e-08!66;UBERON:0000473!2.34e-08!14;UBERON:0003101!4.25e-08!16;UBERON:0000079!4.25e-08!16;UBERON:0005177!7.75e-08!85;UBERON:0002100!8.86e-08!98;UBERON:0000991!1.15e-07!18;UBERON:0005564!1.15e-07!18;UBERON:0003914!1.40e-07!47;UBERON:0002365!4.62e-07!25;UBERON:0002330!4.62e-07!25;UBERON:0000926!5.20e-07!193;UBERON:0004120!5.20e-07!193;UBERON:0006603!5.20e-07!193;UBERON:0004176!5.66e-07!17;UBERON:0009196!5.66e-07!17;UBERON:0009117!5.66e-07!17;UBERON:0003886!1.00e-06!38 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,7.10e-16,23;UBERON:0009856,7.10e-16,23;UBERON:0002107,1.75e-13,22;UBERON:0007499,1.75e-13,22;UBERON:0006925,1.75e-13,22;UBERON:0009497,1.75e-13,22;UBERON:0000015,1.75e-13,22;UBERON:0002423,1.75e-13,22;UBERON:0006235,1.75e-13,22;UBERON:0008835,1.75e-13,22;UBERON:0003894,1.75e-13,22;UBERON:0004161,1.75e-13,22;UBERON:0008836,1.75e-13,22;UBERON:0002365,1.07e-11,25;UBERON:0002330,1.07e-11,25;UBERON:0005256,6.65e-09,45;UBERON:0001155,2.09e-08,2;UBERON:0000059,2.09e-08,2;UBERON:0003914,2.28e-08,47 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.709638518536602,0.183546752161682,0,1.52617609466313,0.439372365468944,0.972149495371417,0.419959264876088,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0.860423876981386,3.39985666853875,2.69851595818909,6.49776417447669,4.92829575807069,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0.593768556259299,0.173485326766136,0,0.230615497256059,0,0.587943535678524,0.376999773989026,0.494389935468748,1.59059292611903,0.884610551949874,0,0,0,1.86391761218122,0,1.46612694769419,1.02182822083437,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0,0.509196819251581,0.248813941220186,0.505445516867349,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0.378212160335639,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,1.32167513193519,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0,0,1.08069024937347,0.796565093017469,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0.31399745568275,0.987177311374404,1.1858105083486,0,0,0.224862112384854,0.405720242777006,0,0,0.287696137450811,1.13494658742525,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,1.61457672169721,5.78932225636041,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0,0,0.162886959353576,0.824850614862677,0,0.485561272309963,0.302323556964751,0.943025398779491,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0.291480836629851,0,0,0.412773735926445,0,0.376736914009382,0,0,0,0.139951452323658,0,1.90934123603023,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0,0,0,2.24274819065968,0.496375471371293,0.388902376688095,0.258319646955462,0.675824501963113,0.938857909166032,1.0416350787516,2.51662426621706,0.241584120826006,0.576060012515731,0,0.202725215290164,0,0,0,0,0,0,0,0.228620419965,0.100826185136841,0,0,0,0,0,0,0,4.44336066274038,0,0.36630324853453,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.382576664137687,0,0 | |phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.709638518536602,0.183546752161682,0,1.52617609466313,0.439372365468944,0.972149495371417,0.419959264876088,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0.860423876981386,3.39985666853875,2.69851595818909,6.49776417447669,4.92829575807069,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0.593768556259299,0.173485326766136,0,0.230615497256059,0,0.587943535678524,0.376999773989026,0.494389935468748,1.59059292611903,0.884610551949874,0,0,0,1.86391761218122,0,1.46612694769419,1.02182822083437,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0,0.509196819251581,0.248813941220186,0.505445516867349,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0.378212160335639,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,1.32167513193519,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0,0,1.08069024937347,0.796565093017469,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0.31399745568275,0.987177311374404,1.1858105083486,0,0,0.224862112384854,0.405720242777006,0,0,0.287696137450811,1.13494658742525,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,1.61457672169721,5.78932225636041,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0,0,0.162886959353576,0.824850614862677,0,0.485561272309963,0.302323556964751,0.943025398779491,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0.291480836629851,0,0,0.412773735926445,0,0.376736914009382,0,0,0,0.139951452323658,0,1.90934123603023,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0,0,0,2.24274819065968,0.496375471371293,0.388902376688095,0.258319646955462,0.675824501963113,0.938857909166032,1.0416350787516,2.51662426621706,0.241584120826006,0.576060012515731,0,0.202725215290164,0,0,0,0,0,0,0,0.228620419965,0.100826185136841,0,0,0,0,0,0,0,4.44336066274038,0,0.36630324853453,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.382576664137687,0,0 | ||
|short_description=p@chr3:107815477..107815490,- | |short_description=p@chr3:107815477..107815490,- | ||
}} | }} |
Latest revision as of 20:43, 5 August 2015
Short description: | p@chr3:107815477..107815490, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:107815477..107815490, - |
Coexpression cluster: | MCL_coexpression_mm9:1192 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.26e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 7.10e-16 | 23 |
sac | 7.10e-16 | 23 |
liver | 1.75e-13 | 22 |
epithelial sac | 1.75e-13 | 22 |
digestive gland | 1.75e-13 | 22 |
epithelium of foregut-midgut junction | 1.75e-13 | 22 |
anatomical boundary | 1.75e-13 | 22 |
hepatobiliary system | 1.75e-13 | 22 |
foregut-midgut junction | 1.75e-13 | 22 |
hepatic diverticulum | 1.75e-13 | 22 |
liver primordium | 1.75e-13 | 22 |
septum transversum | 1.75e-13 | 22 |
liver bud | 1.75e-13 | 22 |
exocrine gland | 1.07e-11 | 25 |
exocrine system | 1.07e-11 | 25 |
trunk mesenchyme | 6.65e-09 | 45 |
colon | 2.09e-08 | 2 |
large intestine | 2.09e-08 | 2 |
epithelial tube | 2.28e-08 | 47 |