FFCP PHASE1:Mm9::chr18:57254736..57254740,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=131 | |MCL_coexpression_id=131 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:57254736..57254740,+ | |||
|description=CAGE_peak_at_chr18:57254736..57254740,+ | |description=CAGE_peak_at_chr18:57254736..57254740,+ | ||
|id=chr18:57254736..57254740,+ | |id=chr18:57254736..57254740,+ | ||
|ontology_enrichment_celltype=CL:0000239!7.62e-13!6;CL:0000677!7.62e-13!6;CL:0000212!7.62e-13!6;CL:0000584!7.62e-13!6;CL:0000473!1.97e-11!3;CL:0000627!1.97e-11!3;CL:0000682!1.97e-11!3;CL:0000075!4.25e-11!7;CL:0002563!9.28e-09!9;CL:0002251!9.28e-09!9;CL:0000066!4.39e-08!25 | |ontology_enrichment_celltype=CL:0000239!7.62e-13!6;CL:0000677!7.62e-13!6;CL:0000212!7.62e-13!6;CL:0000584!7.62e-13!6;CL:0000473!1.97e-11!3;CL:0000627!1.97e-11!3;CL:0000682!1.97e-11!3;CL:0000075!4.25e-11!7;CL:0002563!9.28e-09!9;CL:0002251!9.28e-09!9;CL:0000066!4.39e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.10e-20,6;CL:0000677,3.10e-20,6;CL:0000584,3.10e-20,6;CL:0000075,1.59e-17,7;CL:0002563,6.62e-14,9;CL:0002251,6.62e-14,9;CL:0002076,8.43e-09,15;CL:0000223,7.26e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.83e-19!15;UBERON:0001962!3.28e-17!2;UBERON:0001961!3.28e-17!2;UBERON:0001744!3.28e-17!2;UBERON:0004923!4.05e-12!24;UBERON:0002465!8.39e-12!3;UBERON:0001242!1.98e-10!13;UBERON:0000060!1.98e-10!13;UBERON:0001262!1.98e-10!13;UBERON:0004786!1.98e-10!13;UBERON:0003199!1.73e-09!1;UBERON:0000160!8.67e-09!43;UBERON:0003350!9.28e-09!9;UBERON:0004808!9.28e-09!9;UBERON:0001277!9.28e-09!9;UBERON:0000485!2.91e-07!11 | |ontology_enrichment_uberon=UBERON:0000344!1.83e-19!15;UBERON:0001962!3.28e-17!2;UBERON:0001961!3.28e-17!2;UBERON:0001744!3.28e-17!2;UBERON:0004923!4.05e-12!24;UBERON:0002465!8.39e-12!3;UBERON:0001242!1.98e-10!13;UBERON:0000060!1.98e-10!13;UBERON:0001262!1.98e-10!13;UBERON:0004786!1.98e-10!13;UBERON:0003199!1.73e-09!1;UBERON:0000160!8.67e-09!43;UBERON:0003350!9.28e-09!9;UBERON:0004808!9.28e-09!9;UBERON:0001277!9.28e-09!9;UBERON:0000485!2.91e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.26e-21,13;UBERON:0001262,5.26e-21,13;UBERON:0004786,5.26e-21,13;UBERON:0000344,2.29e-18,15;UBERON:0003350,6.62e-14,9;UBERON:0004808,6.62e-14,9;UBERON:0001277,6.62e-14,9;UBERON:0004923,6.63e-12,24;UBERON:0000485,1.36e-11,11;UBERON:0000331,4.56e-11,3;UBERON:0002116,4.56e-11,3;UBERON:0001204,4.56e-11,3;UBERON:0001168,4.56e-11,3;UBERON:0000160,1.87e-09,31;UBERON:0002108,1.23e-08,4 | |||
|phase1_expression=0,0.348975407639361,0,1.51232105653415,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.68822784320151,0.57423196411502,0,0.215471232685889,7.60093677825496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,1.51232105653415,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.68822784320151,0.57423196411502,0,0.215471232685889,7.60093677825496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:57254736..57254740,+ | |short_description=p@chr18:57254736..57254740,+ | ||
}} | }} |
Latest revision as of 21:57, 5 August 2015
Short description: | p@chr18:57254736..57254740, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:57254736..57254740, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.10e-20 | 6 |
gut absorptive cell | 3.10e-20 | 6 |
enterocyte | 3.10e-20 | 6 |
columnar/cuboidal epithelial cell | 1.59e-17 | 7 |
intestinal epithelial cell | 6.62e-14 | 9 |
epithelial cell of alimentary canal | 6.62e-14 | 9 |
endo-epithelial cell | 8.43e-09 | 15 |
endodermal cell | 7.26e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.26e-21 | 13 |
wall of intestine | 5.26e-21 | 13 |
gastrointestinal system mucosa | 5.26e-21 | 13 |
mucosa | 2.29e-18 | 15 |
epithelium of mucosa | 6.62e-14 | 9 |
gastrointestinal system epithelium | 6.62e-14 | 9 |
intestinal epithelium | 6.62e-14 | 9 |
organ component layer | 6.63e-12 | 24 |
simple columnar epithelium | 1.36e-11 | 11 |
ileal mucosa | 4.56e-11 | 3 |
ileum | 4.56e-11 | 3 |
mucosa of small intestine | 4.56e-11 | 3 |
wall of small intestine | 4.56e-11 | 3 |
intestine | 1.87e-09 | 31 |
small intestine | 1.23e-08 | 4 |