FFCP PHASE1:Mm9::chr11:45940767..45940771,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:45940767..45940771,+
|short_description=p@chr11:45940767..45940771,+
|description=CAGE_peak_at_chr11:45940767..45940771,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=286 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:45940767..45940771,+ | |||
|description=CAGE_peak_at_chr11:45940767..45940771,+ | |||
|id=chr11:45940767..45940771,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.38e-44,6;CL:0000126,5.38e-44,6;CL:0000127,5.38e-44,6;CL:0002453,2.45e-33,8;CL:0000333,6.24e-27,10;CL:0000095,6.24e-27,10;CL:0000243,6.24e-27,10;CL:0000123,6.24e-27,10;CL:0000125,6.24e-27,10;CL:0000030,6.24e-27,10;CL:0000339,6.24e-27,10;CL:0002603,9.49e-16,2;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.05e-13!48;UBERON:0006562!7.36e-11!24;UBERON:0001557!7.36e-11!24;UBERON:0001042!7.36e-11!24;UBERON:0008814!7.36e-11!24;UBERON:0009145!7.36e-11!24;UBERON:0002390!2.46e-10!45;UBERON:0003061!2.46e-10!45;UBERON:0004177!4.15e-10!29;UBERON:0000065!8.90e-10!41;UBERON:0002370!1.27e-09!23;UBERON:0000974!1.27e-09!23;UBERON:0004807!1.27e-09!23;UBERON:0005058!1.27e-09!23;UBERON:0003351!1.27e-09!23;UBERON:0009113!1.27e-09!23;UBERON:0003295!1.27e-09!23;UBERON:0009722!1.27e-09!23;UBERON:0005562!1.27e-09!23;UBERON:0007690!1.27e-09!23;UBERON:0001004!1.88e-09!42;UBERON:0000072!2.44e-09!27;UBERON:0003408!4.07e-09!24;UBERON:0002405!9.26e-09!70;UBERON:0000063!5.87e-08!35;UBERON:0002465!6.19e-07!3;UBERON:0003081!9.94e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.46e-08,4;UBERON:0002680,1.46e-08,4;UBERON:0001895,1.46e-08,4;UBERON:0010092,1.46e-08,4;UBERON:0006215,1.46e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0,0.404950534779652,0,0.315462165358238,0.411343300817216,0.42438965179803,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,3.12956537739216,0,0,0,3.3596741190087,1.43752564364972,0.167782606057736,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358117032009409,0,0,0,0,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0,0.404950534779652,0,0.315462165358238,0.411343300817216,0.42438965179803,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,3.12956537739216,0,0,0,3.3596741190087,1.43752564364972,0.167782606057736,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358117032009409,0,0,0,0,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:45940767..45940771,+ | |||
}} | }} |
Latest revision as of 22:43, 5 August 2015
Short description: | p@chr11:45940767..45940771, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:45940767..45940771, + |
Coexpression cluster: | MCL_coexpression_mm9:286 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.38e-44 | 6 |
macroglial cell | 5.38e-44 | 6 |
astrocyte | 5.38e-44 | 6 |
oligodendrocyte precursor cell | 2.45e-33 | 8 |
migratory neural crest cell | 6.24e-27 | 10 |
neuron associated cell | 6.24e-27 | 10 |
glial cell (sensu Vertebrata) | 6.24e-27 | 10 |
neuron associated cell (sensu Vertebrata) | 6.24e-27 | 10 |
glial cell | 6.24e-27 | 10 |
glioblast | 6.24e-27 | 10 |
glioblast (sensu Vertebrata) | 6.24e-27 | 10 |
astrocyte of the cerebellum | 9.49e-16 | 2 |
neural cell | 4.30e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.46e-08 | 4 |
regional part of metencephalon | 1.46e-08 | 4 |
metencephalon | 1.46e-08 | 4 |
future metencephalon | 1.46e-08 | 4 |
rhombic lip | 1.46e-08 | 4 |