UBERON:0002680
From FANTOM5_SSTAR
Name: | regional part of metencephalon | ||
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Namespace: | FANTOM | ||
Definition: | "A regional part of brain that is part of a metencephalon [Obol]." [OBOL:automatic] | ||
Xrefs: |
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Synonyms: |
"anatomical structure of brain of epencephalon-2" EXACT [OBOL:automatic] "anatomical structure of brain of metencephalon" EXACT [OBOL:automatic] "biological structure of brain of epencephalon-2" EXACT [OBOL:automatic] "biological structure of brain of metencephalon" EXACT [OBOL:automatic] "brain anatomical structure of epencephalon-2" EXACT [OBOL:automatic] "brain anatomical structure of metencephalon" EXACT [OBOL:automatic] "brain biological structure of epencephalon-2" EXACT [OBOL:automatic] "brain biological structure of metencephalon" EXACT [OBOL:automatic] "epencephalon-2 anatomical structure of brain" EXACT [OBOL:automatic] "epencephalon-2 biological structure of brain" EXACT [OBOL:automatic] "epencephalon-2 brain anatomical structure" EXACT [OBOL:automatic] "epencephalon-2 brain biological structure" EXACT [OBOL:automatic] "epencephalon-2 neuraxis segment" EXACT [OBOL:automatic] "epencephalon-2 regional part of brain" EXACT [OBOL:automatic] "epencephalon-2 segment of brain" EXACT [OBOL:automatic] "metencephalon anatomical structure of brain" EXACT [OBOL:automatic] "metencephalon biological structure of brain" EXACT [OBOL:automatic] "metencephalon brain anatomical structure" EXACT [OBOL:automatic] "metencephalon brain biological structure" EXACT [OBOL:automatic] "metencephalon neuraxis segment" EXACT [OBOL:automatic] "metencephalon regional part of brain" EXACT [OBOL:automatic] "metencephalon segment of brain" EXACT [OBOL:automatic] "metencephalon subdivision" EXACT [FMA:67942] "neuraxis segment of epencephalon-2" EXACT [OBOL:automatic] "neuraxis segment of metencephalon" EXACT [OBOL:automatic] "regional part of brain of epencephalon-2" EXACT [OBOL:automatic] "regional part of brain of metencephalon" EXACT [OBOL:automatic] "segment of brain of epencephalon-2" EXACT [OBOL:automatic] "segment of brain of metencephalon" EXACT [OBOL:automatic] "segment of metencephalon" EXACT [NIF_GrossAnatomy:birnlex_1361] | ||
Alt_id: | UBERON:NIF_GrossAnatomy_birnlex_1361-FMA_67942 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000477(anatomical cluster),UBERON:0002616(regional part of brain),UBERON:0010314(structure with developmental contribution from neural crest) |
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part_of: | UBERON:0001895(metencephalon) |
Children
is a: | UBERON:0000988 (pons),UBERON:0002037 (cerebellum) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10033-101E6 (pons, adult, pool1)
- 10083-102B2 (cerebellum, adult, pool1)
- 10114-102E6 (cerebellum)
- 10115-102E7 (cerebellum)
- 10116-102E8 (cerebellum)
- 10117-102E9 (cerebellum)
- 10118-102F1 (cerebellum)
- 10119-102F2 (cerebellum)
- 10120-102F3 (cerebellum)
- 10121-102F4 (cerebellum)
... further results Mouse (Mus musculus)
- 10033-101E6 (pons, adult, pool1)
- 10083-102B2 (cerebellum, adult, pool1)
- 10114-102E6 (cerebellum)
- 10115-102E7 (cerebellum)
- 10116-102E8 (cerebellum)
- 10117-102E9 (cerebellum)
- 10118-102F1 (cerebellum)
- 10119-102F2 (cerebellum)
- 10120-102F3 (cerebellum)
- 10121-102F4 (cerebellum)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002680 (regional part of metencephalon), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
4.91e-91 | FFCP PHASE1:Hg19::chr11:27742115..27742119,-#_5827581d21ab4b6e291ecfac0ee2e13f | p17@BDNF |
4.91e-91 | FFCP PHASE2:Hg19::chr11:27742115..27742119,-#_5827581d21ab4b6e291ecfac0ee2e13f | p17@BDNF |
1.37e-87 | FFCP PHASE2:Hg19::chr11:123448159..123448170,+#_691075566591f542a78745d8c40bbd6a | p4@AB384137 |
1.37e-87 | FFCP PHASE1:Hg19::chr11:123448159..123448170,+#_691075566591f542a78745d8c40bbd6a | p4@AB384137 |
1.37e-87 | FFCP PHASE1:Hg19::chr15:79724672..79724683,+#_691075566591f542a78745d8c40bbd6a | p1@KIAA1024 |
1.37e-87 | FFCP PHASE1:Hg19::chr6:72922728..72922737,+#_691075566591f542a78745d8c40bbd6a | p29@RIMS1 |
1.37e-87 | FFCP PHASE1:Hg19::chr9:135538143..135538152,-#_691075566591f542a78745d8c40bbd6a | p2@CU680380 |
1.37e-87 | FFCP PHASE2:Hg19::chr6:72922728..72922737,+#_691075566591f542a78745d8c40bbd6a | p29@RIMS1 |
1.37e-87 | FFCP PHASE2:Hg19::chr9:135538143..135538152,-#_691075566591f542a78745d8c40bbd6a | p2@CU680380 |
1.37e-87 | FFCP PHASE1:Hg19::chr17:50236110..50236119,-#_691075566591f542a78745d8c40bbd6a | p22@CA10 |
1.37e-87 | FFCP PHASE1:Hg19::chr17:72667462..72667471,+#_691075566591f542a78745d8c40bbd6a | p11@RAB37 |
1.37e-87 | FFCP PHASE1:Hg19::chr17:72857611..72857619,-#_691075566591f542a78745d8c40bbd6a | p@chr17:72857611..72857619, - |
1.37e-87 | FFCP PHASE2:Hg19::chr15:79724672..79724683,+#_691075566591f542a78745d8c40bbd6a | p1@KIAA1024 |
1.37e-87 | FFCP PHASE2:Hg19::chr17:50236110..50236119,-#_691075566591f542a78745d8c40bbd6a | p22@CA10 |
1.37e-87 | FFCP PHASE2:Hg19::chr17:72667462..72667471,+#_691075566591f542a78745d8c40bbd6a | p11@RAB37 |
1.37e-87 | FFCP PHASE2:Hg19::chr17:72857611..72857619,-#_691075566591f542a78745d8c40bbd6a | p@chr17:72857611..72857619, - |
3.19e-78 | FFCP PHASE2:Hg19::chr5:20575610..20575619,-#_737b8a37cd50ac2efeee3b652fd78764 | p11@CDH18 |
3.19e-78 | FFCP PHASE1:Hg19::chr11:122733138..122733178,+#_737b8a37cd50ac2efeee3b652fd78764 | p3@CRTAM |
3.19e-78 | FFCP PHASE2:Hg19::chr11:122733138..122733178,+#_737b8a37cd50ac2efeee3b652fd78764 | p3@CRTAM |
3.19e-78 | FFCP PHASE1:Hg19::chr5:20575610..20575619,-#_737b8a37cd50ac2efeee3b652fd78764 | p11@CDH18 |
2.16e-70 | FFCP PHASE2:Hg19::chr9:135457457..135457468,+#_7e3337643e31246586c71cec46e4e062 | p4@BARHL1 |
2.16e-70 | FFCP PHASE1:Hg19::chr9:135457457..135457468,+#_7e3337643e31246586c71cec46e4e062 | p4@BARHL1 |
2.58e-70 | FFCP PHASE2:Hg19::chr17:72667518..72667529,+#_ca02317aaf8eb5cc04d7ae03993bc0f8 | p8@RAB37 |
2.58e-70 | FFCP PHASE2:Hg19::chr1:159842835..159842846,-#_ca02317aaf8eb5cc04d7ae03993bc0f8 | p1@ENST00000536764 |
2.58e-70 | FFCP PHASE1:Hg19::chr4:117873850..117873861,-#_ca02317aaf8eb5cc04d7ae03993bc0f8 | p@chr4:117873850..117873861, - |
2.58e-70 | FFCP PHASE1:Hg19::chr17:72667518..72667529,+#_ca02317aaf8eb5cc04d7ae03993bc0f8 | p8@RAB37 |
2.58e-70 | FFCP PHASE1:Hg19::chr1:159842835..159842846,-#_ca02317aaf8eb5cc04d7ae03993bc0f8 | p1@ENST00000536764 |
2.58e-70 | FFCP PHASE1:Hg19::chr20:30616906..30616921,-#_ca02317aaf8eb5cc04d7ae03993bc0f8 | p@chr20:30616906..30616921, - |
2.58e-70 | FFCP PHASE2:Hg19::chr20:30616906..30616921,-#_ca02317aaf8eb5cc04d7ae03993bc0f8 | p@chr20:30616906..30616921, - |
2.58e-70 | FFCP PHASE2:Hg19::chr4:117873850..117873861,-#_ca02317aaf8eb5cc04d7ae03993bc0f8 | p@chr4:117873850..117873861, - |
3.09e-70 | FFCP PHASE2:Hg19::chr20:62795787..62795793,+#_29c1661b54557a10961c301ad5d38e28 | p8@MYT1 |
3.09e-70 | FFCP PHASE2:Hg19::chr17:50235999..50236008,-#_29c1661b54557a10961c301ad5d38e28 | p21@CA10 |
3.09e-70 | FFCP PHASE1:Hg19::chr17:50235999..50236008,-#_29c1661b54557a10961c301ad5d38e28 | p21@CA10 |
3.09e-70 | FFCP PHASE1:Hg19::chr20:62795787..62795793,+#_29c1661b54557a10961c301ad5d38e28 | p8@MYT1 |
9.93e-69 | FFCP PHASE2:Hg19::chr22:26565113..26565124,+#_9e2fad1a678a3bdbb1116c4bb4aee528 | p7@SEZ6L |
9.93e-69 | FFCP PHASE1:Hg19::chr22:26565113..26565124,+#_9e2fad1a678a3bdbb1116c4bb4aee528 | p7@SEZ6L |
3.04e-66 | FFCP PHASE1:Hg19::chr2:72381655..72381673,-#_691e356e515347d87d1e0230c44a6615 | p@chr2:72381655..72381673, - |
3.04e-66 | FFCP PHASE2:Hg19::chr2:72381655..72381673,-#_691e356e515347d87d1e0230c44a6615 | p@chr2:72381655..72381673, - |
3.75e-66 | FFCP PHASE2:Hg19::chr1:2241890..2241895,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr1:2241890..2241895, - |
3.75e-66 | FFCP PHASE2:Hg19::chr1:228602576..228602587,-#_25bcc9108f32d57c85d5dd566f02fe40 | p1@CU689740 |
3.75e-66 | FFCP PHASE2:Hg19::chr1:242613002..242613023,-#_25bcc9108f32d57c85d5dd566f02fe40 | p11@PLD5 |
3.75e-66 | FFCP PHASE2:Hg19::chr1:244355163..244355179,+#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr1:244355163..244355179, + |
3.75e-66 | FFCP PHASE2:Hg19::chr1:244355180..244355201,+#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr1:244355180..244355201, + |
3.75e-66 | FFCP PHASE2:Hg19::chr1:24526024..24526028,+#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr1:24526024..24526028, + |
3.75e-66 | FFCP PHASE2:Hg19::chr1:46639505..46639517,+#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr1:46639505..46639517, + |
3.75e-66 | FFCP PHASE2:Hg19::chr1:59775744..59775751,+#_25bcc9108f32d57c85d5dd566f02fe40 | p24@FGGY |
3.75e-66 | FFCP PHASE2:Hg19::chr1:59775752..59775763,+#_25bcc9108f32d57c85d5dd566f02fe40 | p19@FGGY |
3.75e-66 | FFCP PHASE2:Hg19::chr20:30616884..30616898,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr20:30616884..30616898, - |
3.75e-66 | FFCP PHASE2:Hg19::chr20:44935658..44935665,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr20:44935658..44935665, - |
3.75e-66 | FFCP PHASE2:Hg19::chr20:45061641..45061646,-#_25bcc9108f32d57c85d5dd566f02fe40 | p13@ELMO2 |
3.75e-66 | FFCP PHASE2:Hg19::chr20:45061929..45061936,+#_25bcc9108f32d57c85d5dd566f02fe40 | p8@AK054905 |
3.75e-66 | FFCP PHASE2:Hg19::chr20:45062007..45062020,+#_25bcc9108f32d57c85d5dd566f02fe40 | p7@AK054905 |
3.75e-66 | FFCP PHASE2:Hg19::chr20:45062029..45062044,+#_25bcc9108f32d57c85d5dd566f02fe40 | p6@AK054905 |
3.75e-66 | FFCP PHASE2:Hg19::chr20:45062215..45062225,+#_25bcc9108f32d57c85d5dd566f02fe40 | p4@AK054905 |
3.75e-66 | FFCP PHASE2:Hg19::chr20:45062290..45062300,+#_25bcc9108f32d57c85d5dd566f02fe40 | p3@AK054905 |
3.75e-66 | FFCP PHASE2:Hg19::chr21:32624498..32624505,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr21:32624498..32624505, - |
3.75e-66 | FFCP PHASE2:Hg19::chr21:32624517..32624531,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr21:32624517..32624531, - |
3.75e-66 | FFCP PHASE2:Hg19::chr21:47268058..47268079,+#_25bcc9108f32d57c85d5dd566f02fe40 | p5@PCBP3 |
3.75e-66 | FFCP PHASE2:Hg19::chr21:47314143..47314154,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr21:47314143..47314154, - |
3.75e-66 | FFCP PHASE2:Hg19::chr22:17891551..17891560,+#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr22:17891551..17891560, + |
3.75e-66 | FFCP PHASE2:Hg19::chr22:31968960..31968972,+#_25bcc9108f32d57c85d5dd566f02fe40 | p13@SFI1 |
3.75e-66 | FFCP PHASE2:Hg19::chr22:32022290..32022297,-#_25bcc9108f32d57c85d5dd566f02fe40 | p30@PISD |
3.75e-66 | FFCP PHASE2:Hg19::chr22:51137783..51137794,+#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr22:51137783..51137794, + |
3.75e-66 | FFCP PHASE2:Hg19::chr2:149835072..149835078,+#_25bcc9108f32d57c85d5dd566f02fe40 | p39@KIF5C |
3.75e-66 | FFCP PHASE2:Hg19::chr2:155565839..155565848,+#_25bcc9108f32d57c85d5dd566f02fe40 | p12@KCNJ3 |
3.75e-66 | FFCP PHASE2:Hg19::chr2:202634440..202634472,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr2:202634440..202634472, - |
3.75e-66 | FFCP PHASE2:Hg19::chr2:39116996..39117003,+#_25bcc9108f32d57c85d5dd566f02fe40 | p7@ARHGEF33 |
3.75e-66 | FFCP PHASE2:Hg19::chr2:39892073..39892078,+#_25bcc9108f32d57c85d5dd566f02fe40 | p25@TMEM178 |
3.75e-66 | FFCP PHASE2:Hg19::chr2:39894333..39894353,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr2:39894333..39894353, - |
3.75e-66 | FFCP PHASE2:Hg19::chr3:147114396..147114403,-#_25bcc9108f32d57c85d5dd566f02fe40 | p23@ZIC4 |
3.75e-66 | FFCP PHASE2:Hg19::chr3:147139238..147139247,+#_25bcc9108f32d57c85d5dd566f02fe40 | p26@ZIC1 |
3.75e-66 | FFCP PHASE2:Hg19::chr3:147141170..147141181,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr3:147141170..147141181, - |
3.75e-66 | FFCP PHASE2:Hg19::chr3:22062741..22062742,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr3:22062741..22062742, - |
3.75e-66 | FFCP PHASE2:Hg19::chr3:22108225..22108233,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr3:22108225..22108233, - |
3.75e-66 | FFCP PHASE2:Hg19::chr3:22108366..22108373,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr3:22108366..22108373, - |
3.75e-66 | FFCP PHASE2:Hg19::chr3:22108417..22108426,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr3:22108417..22108426, - |
3.75e-66 | FFCP PHASE2:Hg19::chr3:9165885..9165918,+#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr3:9165885..9165918, + |
3.75e-66 | FFCP PHASE2:Hg19::chr4:114254131..114254143,+#_25bcc9108f32d57c85d5dd566f02fe40 | p35@ANK2 |
3.75e-66 | FFCP PHASE2:Hg19::chr4:117873869..117873879,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr4:117873869..117873879, - |
3.75e-66 | FFCP PHASE2:Hg19::chr4:166678786..166678822,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr4:166678786..166678822, - |
3.75e-66 | FFCP PHASE2:Hg19::chr4:2257102..2257110,-#_25bcc9108f32d57c85d5dd566f02fe40 | p6@MXD4 |
3.75e-66 | FFCP PHASE2:Hg19::chr4:3287626..3287633,+#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr4:3287626..3287633, + |
3.75e-66 | FFCP PHASE2:Hg19::chr4:718943..718952,+#_25bcc9108f32d57c85d5dd566f02fe40 | p10@PCGF3 |
3.75e-66 | FFCP PHASE2:Hg19::chr4:71928371..71928382,+#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr4:71928371..71928382, + |
3.75e-66 | FFCP PHASE2:Hg19::chr4:71928391..71928403,+#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr4:71928391..71928403, + |
3.75e-66 | FFCP PHASE1:Hg19::chr16:87376991..87377002,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr16:87376991..87377002, - |
3.75e-66 | FFCP PHASE1:Hg19::chr16:87377029..87377039,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr16:87377029..87377039, - |
3.75e-66 | FFCP PHASE1:Hg19::chr17:39553443..39553452,-#_25bcc9108f32d57c85d5dd566f02fe40 | p2@KRT31 |
3.75e-66 | FFCP PHASE1:Hg19::chr17:48545700..48545707,+#_25bcc9108f32d57c85d5dd566f02fe40 | p5@ACSF2 |
3.75e-66 | FFCP PHASE1:Hg19::chr17:588406..588409,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr17:588406..588409, - |
3.75e-66 | FFCP PHASE1:Hg19::chr17:72667207..72667214,+#_25bcc9108f32d57c85d5dd566f02fe40 | p12@RAB37 |
3.75e-66 | FFCP PHASE1:Hg19::chr17:72667483..72667484,+#_25bcc9108f32d57c85d5dd566f02fe40 | p18@RAB37 |
3.75e-66 | FFCP PHASE1:Hg19::chr17:72667619..72667628,+#_25bcc9108f32d57c85d5dd566f02fe40 | p9@RAB37 |
3.75e-66 | FFCP PHASE1:Hg19::chr17:72673744..72673754,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr17:72673744..72673754, - |
3.75e-66 | FFCP PHASE1:Hg19::chr17:72673771..72673779,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr17:72673771..72673779, - |
3.75e-66 | FFCP PHASE1:Hg19::chr17:9862312..9862332,-#_25bcc9108f32d57c85d5dd566f02fe40 | p32@GAS7 |
3.75e-66 | FFCP PHASE1:Hg19::chr18:39687774..39687782,+#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr18:39687774..39687782, + |
3.75e-66 | FFCP PHASE1:Hg19::chr18:50985377..50985386,-#_25bcc9108f32d57c85d5dd566f02fe40 | p@chr18:50985377..50985386, - |
3.75e-66 | FFCP PHASE1:Hg19::chr18:5197269..5197276,-#_25bcc9108f32d57c85d5dd566f02fe40 | p7@C18orf42 |
3.75e-66 | FFCP PHASE1:Hg19::chr18:59415396..59415427,+#_25bcc9108f32d57c85d5dd566f02fe40 | p1@uc002lig.1 |