FFCP PHASE1:Mm9::chr5:113567134..113567171,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |MCL_coexpression_id=8 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:113567134..113567171,- | |||
|description=CAGE_peak_at_chr5:113567134..113567171,- | |description=CAGE_peak_at_chr5:113567134..113567171,- | ||
|id=chr5:113567134..113567171,- | |id=chr5:113567134..113567171,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.94e-10,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.08e-11!22;UBERON:0007499!5.08e-11!22;UBERON:0006925!5.08e-11!22;UBERON:0009497!5.08e-11!22;UBERON:0000015!5.08e-11!22;UBERON:0002423!5.08e-11!22;UBERON:0006235!5.08e-11!22;UBERON:0008835!5.08e-11!22;UBERON:0003894!5.08e-11!22;UBERON:0004161!5.08e-11!22;UBERON:0008836!5.08e-11!22;UBERON:0009854!5.19e-10!23;UBERON:0009856!5.19e-10!23;UBERON:0002365!6.45e-09!25;UBERON:0002330!6.45e-09!25;UBERON:0005177!8.21e-08!85;UBERON:0003914!1.97e-07!47 | |ontology_enrichment_uberon=UBERON:0002107!5.08e-11!22;UBERON:0007499!5.08e-11!22;UBERON:0006925!5.08e-11!22;UBERON:0009497!5.08e-11!22;UBERON:0000015!5.08e-11!22;UBERON:0002423!5.08e-11!22;UBERON:0006235!5.08e-11!22;UBERON:0008835!5.08e-11!22;UBERON:0003894!5.08e-11!22;UBERON:0004161!5.08e-11!22;UBERON:0008836!5.08e-11!22;UBERON:0009854!5.19e-10!23;UBERON:0009856!5.19e-10!23;UBERON:0002365!6.45e-09!25;UBERON:0002330!6.45e-09!25;UBERON:0005177!8.21e-08!85;UBERON:0003914!1.97e-07!47 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.60e-24,22;UBERON:0007499,4.60e-24,22;UBERON:0006925,4.60e-24,22;UBERON:0009497,4.60e-24,22;UBERON:0000015,4.60e-24,22;UBERON:0002423,4.60e-24,22;UBERON:0006235,4.60e-24,22;UBERON:0008835,4.60e-24,22;UBERON:0003894,4.60e-24,22;UBERON:0004161,4.60e-24,22;UBERON:0008836,4.60e-24,22;UBERON:0009854,8.88e-23,23;UBERON:0009856,8.88e-23,23;UBERON:0002365,1.62e-20,25;UBERON:0002330,1.62e-20,25;UBERON:0005256,1.20e-11,45;UBERON:0005172,4.52e-09,49;UBERON:0005173,4.52e-09,49;UBERON:0002417,4.52e-09,49;UBERON:0000916,4.52e-09,49;UBERON:0005177,1.29e-08,79;UBERON:0003914,1.69e-08,47;UBERON:0000949,3.67e-08,72;UBERON:0003104,5.32e-08,61;UBERON:0009142,5.32e-08,61;UBERON:0002100,9.39e-07,90 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.496454756004426,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.420649922702764,0.285650984403804,0.662605622854841,0.244981598429908,0,0,1.10115880999389,1.40456071893706,0.921639199537461,0.131886287730194,0.548925861614458,0.52091337055676,0.558365998002762,0.56276261003168,0.15279824777681,0,0.427115042397309,0.186399445825301,0,0.0755715601067855,3.47837386442013,8.60423876981386,17.6792546764015,24.8263468153396,25.3412802804591,15.2329141613094,5.05599912474307,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,7.87868770061514,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,1.97755974187499,0,0,1.13236794963186,0,0,0,0,0.83778682725382,0,0,0.599902730993408,0,0.299581278809645,0.915001205637253,0.251308704225729,0.173824320192276,0.255715457330331,0.62336413367868,0.811206315338788,0.611036183101898,0.870848794270651,0,13.4682787767343,0,0,0,0.60281927134286,0.272145996605311,1.0249097622788,0.655912071918102,1.55222022443409,0,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,0,0.61734640922383,0,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.710234206755631,0.787056926989615,0.462801338662135,0.697601834251224,0.268273401399619,0.700592054203017,0.329119699826961,0.164167464079095,0.405344047729279,0.438599962275997,0.219550115291051,0.268412837520744,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0.38660238396628,0.403367049246685,0.22237804384487,0.760902504450237,0,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,12.1545577105731,0.333690211432188,0,0.224862112384854,0.202860121388503,2.17059443777175,2.5462585178142,3.74004978686054,2.91843408195064,3.0201755450689,4.31304619582064,10.4199465347181,5.92871578917665,9.34541848404313,10.5844473977928,14.9557491622644,0.554259570499814,0,0.162964976442026,0.678980343100753,0,0.670025029767263,0.714130922658041,0.975668239288994,0.630540576424764,0.44292937929755,0.637819074629948,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,0,0.468846746368813,0,2.7771801992481,0,0,0,0.477937595905104,0,0.566153061577665,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0.162886959353576,0.659880491890142,0,0.971122544619926,1.209294227859,2.26326095707078,1.18120757152309,1.22974059177571,0.775284879504663,1.09060118843252,0.712994756769443,0.632073515871632,2.10837217149998,0,0,0,0.388076051348264,0,0.177340233642274,0.713475270408282,0.493647061806363,0.608929898229199,5.16277757740163,14.8282449604674,0.220528398054962,1.31909002353184,1.13025098687134,0.241251699712623,0.477489376012546,0.328281799490123,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0.419854356970974,0.552799895217695,0,0,0.813277868507395,0.86404272657441,0.418176592028937,1.31017538247707,0.539457385539283,1.73572257023205,0.523511883968059,0.388844919875379,0,0,0.149516546043979,0,0,0.258319646955462,0,0,0,0,0,0.576060012515731,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.680191150845634,0.221985953374065,0,0,2.31827512838629,0.93841237725591,0.73260649706906,0.643105137237198,3.51100472824754,0,0.920650473014354,0,0.68741272937475,0,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0.486213434136588,0.628839487883947,0.735374033800057,0.222246727801615,1.03017528619447,0.64183841918363,1.01078884705519,0.50695859978048,1.88626341386076,1.03005658216871,1.08842759088278,1.09127391015665,0.476293691283074,0.811190281613988,0.964546102318525,0.824171801606613,0.883193520806384,0,0.70990322463735,0.715308569841963,1.45346416632329,0.846984423737976,1.01537529470012,0.182927972872773,1.31534855718921,0.679020569229309,0.561142271657738,1.06771516311757,0.985044823755635,0.818462086339379,1.08455788830176,1.15743966588685,1.49886346762768,0.467863216890817,1.71896843238639,2.29545998482612,0.882365676478062,0.463735671240843 | |phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.496454756004426,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.420649922702764,0.285650984403804,0.662605622854841,0.244981598429908,0,0,1.10115880999389,1.40456071893706,0.921639199537461,0.131886287730194,0.548925861614458,0.52091337055676,0.558365998002762,0.56276261003168,0.15279824777681,0,0.427115042397309,0.186399445825301,0,0.0755715601067855,3.47837386442013,8.60423876981386,17.6792546764015,24.8263468153396,25.3412802804591,15.2329141613094,5.05599912474307,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,7.87868770061514,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,1.97755974187499,0,0,1.13236794963186,0,0,0,0,0.83778682725382,0,0,0.599902730993408,0,0.299581278809645,0.915001205637253,0.251308704225729,0.173824320192276,0.255715457330331,0.62336413367868,0.811206315338788,0.611036183101898,0.870848794270651,0,13.4682787767343,0,0,0,0.60281927134286,0.272145996605311,1.0249097622788,0.655912071918102,1.55222022443409,0,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,0,0.61734640922383,0,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.710234206755631,0.787056926989615,0.462801338662135,0.697601834251224,0.268273401399619,0.700592054203017,0.329119699826961,0.164167464079095,0.405344047729279,0.438599962275997,0.219550115291051,0.268412837520744,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0.38660238396628,0.403367049246685,0.22237804384487,0.760902504450237,0,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,12.1545577105731,0.333690211432188,0,0.224862112384854,0.202860121388503,2.17059443777175,2.5462585178142,3.74004978686054,2.91843408195064,3.0201755450689,4.31304619582064,10.4199465347181,5.92871578917665,9.34541848404313,10.5844473977928,14.9557491622644,0.554259570499814,0,0.162964976442026,0.678980343100753,0,0.670025029767263,0.714130922658041,0.975668239288994,0.630540576424764,0.44292937929755,0.637819074629948,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,0,0.468846746368813,0,2.7771801992481,0,0,0,0.477937595905104,0,0.566153061577665,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0.162886959353576,0.659880491890142,0,0.971122544619926,1.209294227859,2.26326095707078,1.18120757152309,1.22974059177571,0.775284879504663,1.09060118843252,0.712994756769443,0.632073515871632,2.10837217149998,0,0,0,0.388076051348264,0,0.177340233642274,0.713475270408282,0.493647061806363,0.608929898229199,5.16277757740163,14.8282449604674,0.220528398054962,1.31909002353184,1.13025098687134,0.241251699712623,0.477489376012546,0.328281799490123,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0.419854356970974,0.552799895217695,0,0,0.813277868507395,0.86404272657441,0.418176592028937,1.31017538247707,0.539457385539283,1.73572257023205,0.523511883968059,0.388844919875379,0,0,0.149516546043979,0,0,0.258319646955462,0,0,0,0,0,0.576060012515731,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.680191150845634,0.221985953374065,0,0,2.31827512838629,0.93841237725591,0.73260649706906,0.643105137237198,3.51100472824754,0,0.920650473014354,0,0.68741272937475,0,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0.486213434136588,0.628839487883947,0.735374033800057,0.222246727801615,1.03017528619447,0.64183841918363,1.01078884705519,0.50695859978048,1.88626341386076,1.03005658216871,1.08842759088278,1.09127391015665,0.476293691283074,0.811190281613988,0.964546102318525,0.824171801606613,0.883193520806384,0,0.70990322463735,0.715308569841963,1.45346416632329,0.846984423737976,1.01537529470012,0.182927972872773,1.31534855718921,0.679020569229309,0.561142271657738,1.06771516311757,0.985044823755635,0.818462086339379,1.08455788830176,1.15743966588685,1.49886346762768,0.467863216890817,1.71896843238639,2.29545998482612,0.882365676478062,0.463735671240843 | ||
|short_description=p@chr5:113567134..113567171,- | |short_description=p@chr5:113567134..113567171,- | ||
}} | }} |
Latest revision as of 01:25, 6 August 2015
Short description: | p@chr5:113567134..113567171, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:113567134..113567171, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.94e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 4.60e-24 | 22 |
epithelial sac | 4.60e-24 | 22 |
digestive gland | 4.60e-24 | 22 |
epithelium of foregut-midgut junction | 4.60e-24 | 22 |
anatomical boundary | 4.60e-24 | 22 |
hepatobiliary system | 4.60e-24 | 22 |
foregut-midgut junction | 4.60e-24 | 22 |
hepatic diverticulum | 4.60e-24 | 22 |
liver primordium | 4.60e-24 | 22 |
septum transversum | 4.60e-24 | 22 |
liver bud | 4.60e-24 | 22 |
digestive tract diverticulum | 8.88e-23 | 23 |
sac | 8.88e-23 | 23 |
exocrine gland | 1.62e-20 | 25 |
exocrine system | 1.62e-20 | 25 |
trunk mesenchyme | 1.20e-11 | 45 |
abdomen element | 4.52e-09 | 49 |
abdominal segment element | 4.52e-09 | 49 |
abdominal segment of trunk | 4.52e-09 | 49 |
abdomen | 4.52e-09 | 49 |
trunk region element | 1.29e-08 | 79 |
epithelial tube | 1.69e-08 | 47 |
endocrine system | 3.67e-08 | 72 |
mesenchyme | 5.32e-08 | 61 |
entire embryonic mesenchyme | 5.32e-08 | 61 |
trunk | 9.39e-07 | 90 |