FFCP PHASE1:Mm9::chr5:115421126..115421137,-: Difference between revisions
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{{FFCP|EntrezGene=21405|HGNC=|MCL_coexpression_id=24|UniProt=P22361|association_with_transcript=-50bp_to_ENSMUST00000031535_5end|description=CAGE_peak_4_at_Hnf1a_5end|id=chr5:115421126..115421137,-|ontology_enrichment_celltype=CL:0002563!5.93e-09!9;CL:0002251!5.93e-09!9;CL:0000239!2.49e-07!6;CL:0000677!2.49e-07!6;CL:0000212!2.49e-07!6;CL:0000584!2.49e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,4.49e-13,6;CL:0000677,4.49e-13,6;CL:0000584,4.49e-13,6;CL:0000075,4.39e-11,7;CL:0002563,1.98e-08,9;CL:0002251,1.98e-08,9;CL:0000066,8.20e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.29e-23!43;UBERON:0005409!1.53e-22!59;UBERON:0004119!4.41e-16!130;UBERON:0000925!4.41e-16!130;UBERON:0006595!4.41e-16!130;UBERON:0001007!5.28e-16!128;UBERON:0001555!5.28e-16!128;UBERON:0007026!5.28e-16!128;UBERON:0004921!9.68e-15!126;UBERON:0004185!9.68e-15!126;UBERON:0000344!5.28e-14!15;UBERON:0001242!2.14e-12!13;UBERON:0000060!2.14e-12!13;UBERON:0001262!2.14e-12!13;UBERON:0004786!2.14e-12!13;UBERON:0002107!5.14e-10!22;UBERON:0007499!5.14e-10!22;UBERON:0006925!5.14e-10!22;UBERON:0009497!5.14e-10!22;UBERON:0000015!5.14e-10!22;UBERON:0002423!5.14e-10!22;UBERON:0006235!5.14e-10!22;UBERON:0008835!5.14e-10!22;UBERON:0003894!5.14e-10!22;UBERON:0004161!5.14e-10!22;UBERON:0008836!5.14e-10!22;UBERON:0005172!1.28e-09!49;UBERON:0005173!1.28e-09!49;UBERON:0002417!1.28e-09!49;UBERON:0000916!1.28e-09!49;UBERON:0009854!2.49e-09!23;UBERON:0009856!2.49e-09!23;UBERON:0003350!5.93e-09!9;UBERON:0004808!5.93e-09!9;UBERON:0001277!5.93e-09!9;UBERON:0004923!1.16e-08!24;UBERON:0002365!3.87e-08!25;UBERON:0002330!3.87e-08!25;UBERON:0000485!7.98e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.99e-36,31;UBERON:0005409,9.47e-24,47;UBERON:0000344,1.76e-15,15;UBERON:0001007,1.27e-13,116;UBERON:0001555,1.27e-13,116;UBERON:0007026,1.27e-13,116;UBERON:0004119,2.97e-13,118;UBERON:0000925,2.97e-13,118;UBERON:0006595,2.97e-13,118;UBERON:0001242,1.71e-12,13;UBERON:0001262,1.71e-12,13;UBERON:0004786,1.71e-12,13;UBERON:0004921,6.34e-12,114;UBERON:0004923,9.81e-09,24;UBERON:0003350,1.98e-08,9;UBERON:0004808,1.98e-08,9;UBERON:0001277,1.98e-08,9;UBERON:0000485,9.63e-07,11|phase1_expression=0,4.53668029931169,2.27499619694768,10.5862473957391,12.0214975187123,1.34303417529512,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,1.43993180514066,1.37645568640302,2.29692785646008,2.15380998079537,1.07735616342945,4.75058548640935,1.51218077855958,0.665191531965914,0,0,0,0.866554859253824,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,1.07940638327563,1.29955283489534,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,5.02456076660734,0,0,2.19074684247559,2.01683524623343,3.55804870151792,3.61428689613862,3.32170343081158,1.64698954724011,2.26201687920243,3.18330355265841,3.31438948102504,3.59527763461689,5.18731319699266,2.78797782556114,0.379335801906163,0.571242563048644,1.1270773567308,0.407302655690628,1.35766741017338,0.49095073923223,0.885311519739602,1.91893192373483,1.72698600625512,1.35736880313981,0.592905254174298,0.166845105716094,0,0.224862112384854,0.202860121388503,0.964708639009667,0.25462585178142,1.43848068725405,1.45921704097532,0.549122826376163,2.87536413054709,0.744281895337007,2.18426371180192,1.01031551178845,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906970670894253,0.188605079755898,0.295301892880773,0.922305443831782,0.775284879504663,0.727067458955011,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.269728692769641,0.41326727862668,0.785267825952089,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.448176066834085,0.402048282689293,0,0.347652977834566,0.38581844092741,0,0.441596760403192,0.342869252385415,0.70990322463735,0.476872379894642,0,0.282328141245992,0.25384382367503,0,0.263069711437843,0,1.12228454331548,0.237270036248348,0.0985044823755635,0.818462086339379,0,0,0,0,0.214871054048298,0,0,0|short_description=p4@Hnf1a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21405 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P22361 | |||
|association_with_transcript=-50bp_to_ENSMUST00000031535_5end | |||
|cluster_id=chr5:115421126..115421137,- | |||
|description=CAGE_peak_4_at_Hnf1a_5end | |||
|id=chr5:115421126..115421137,- | |||
|ontology_enrichment_celltype=CL:0002563!5.93e-09!9;CL:0002251!5.93e-09!9;CL:0000239!2.49e-07!6;CL:0000677!2.49e-07!6;CL:0000212!2.49e-07!6;CL:0000584!2.49e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.49e-13,6;CL:0000677,4.49e-13,6;CL:0000584,4.49e-13,6;CL:0000075,4.39e-11,7;CL:0002563,1.98e-08,9;CL:0002251,1.98e-08,9;CL:0000066,8.20e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.29e-23!43;UBERON:0005409!1.53e-22!59;UBERON:0004119!4.41e-16!130;UBERON:0000925!4.41e-16!130;UBERON:0006595!4.41e-16!130;UBERON:0001007!5.28e-16!128;UBERON:0001555!5.28e-16!128;UBERON:0007026!5.28e-16!128;UBERON:0004921!9.68e-15!126;UBERON:0004185!9.68e-15!126;UBERON:0000344!5.28e-14!15;UBERON:0001242!2.14e-12!13;UBERON:0000060!2.14e-12!13;UBERON:0001262!2.14e-12!13;UBERON:0004786!2.14e-12!13;UBERON:0002107!5.14e-10!22;UBERON:0007499!5.14e-10!22;UBERON:0006925!5.14e-10!22;UBERON:0009497!5.14e-10!22;UBERON:0000015!5.14e-10!22;UBERON:0002423!5.14e-10!22;UBERON:0006235!5.14e-10!22;UBERON:0008835!5.14e-10!22;UBERON:0003894!5.14e-10!22;UBERON:0004161!5.14e-10!22;UBERON:0008836!5.14e-10!22;UBERON:0005172!1.28e-09!49;UBERON:0005173!1.28e-09!49;UBERON:0002417!1.28e-09!49;UBERON:0000916!1.28e-09!49;UBERON:0009854!2.49e-09!23;UBERON:0009856!2.49e-09!23;UBERON:0003350!5.93e-09!9;UBERON:0004808!5.93e-09!9;UBERON:0001277!5.93e-09!9;UBERON:0004923!1.16e-08!24;UBERON:0002365!3.87e-08!25;UBERON:0002330!3.87e-08!25;UBERON:0000485!7.98e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.99e-36,31;UBERON:0005409,9.47e-24,47;UBERON:0000344,1.76e-15,15;UBERON:0001007,1.27e-13,116;UBERON:0001555,1.27e-13,116;UBERON:0007026,1.27e-13,116;UBERON:0004119,2.97e-13,118;UBERON:0000925,2.97e-13,118;UBERON:0006595,2.97e-13,118;UBERON:0001242,1.71e-12,13;UBERON:0001262,1.71e-12,13;UBERON:0004786,1.71e-12,13;UBERON:0004921,6.34e-12,114;UBERON:0004923,9.81e-09,24;UBERON:0003350,1.98e-08,9;UBERON:0004808,1.98e-08,9;UBERON:0001277,1.98e-08,9;UBERON:0000485,9.63e-07,11 | |||
|phase1_expression=0,4.53668029931169,2.27499619694768,10.5862473957391,12.0214975187123,1.34303417529512,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,1.43993180514066,1.37645568640302,2.29692785646008,2.15380998079537,1.07735616342945,4.75058548640935,1.51218077855958,0.665191531965914,0,0,0,0.866554859253824,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,1.07940638327563,1.29955283489534,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,5.02456076660734,0,0,2.19074684247559,2.01683524623343,3.55804870151792,3.61428689613862,3.32170343081158,1.64698954724011,2.26201687920243,3.18330355265841,3.31438948102504,3.59527763461689,5.18731319699266,2.78797782556114,0.379335801906163,0.571242563048644,1.1270773567308,0.407302655690628,1.35766741017338,0.49095073923223,0.885311519739602,1.91893192373483,1.72698600625512,1.35736880313981,0.592905254174298,0.166845105716094,0,0.224862112384854,0.202860121388503,0.964708639009667,0.25462585178142,1.43848068725405,1.45921704097532,0.549122826376163,2.87536413054709,0.744281895337007,2.18426371180192,1.01031551178845,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906970670894253,0.188605079755898,0.295301892880773,0.922305443831782,0.775284879504663,0.727067458955011,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.269728692769641,0.41326727862668,0.785267825952089,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.448176066834085,0.402048282689293,0,0.347652977834566,0.38581844092741,0,0.441596760403192,0.342869252385415,0.70990322463735,0.476872379894642,0,0.282328141245992,0.25384382367503,0,0.263069711437843,0,1.12228454331548,0.237270036248348,0.0985044823755635,0.818462086339379,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Hnf1a | |||
}} |
Revision as of 02:31, 6 August 2015
Short description: | p4@Hnf1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Hnf1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -50bp_to_ENSMUST00000031535_5end |
EntrezGene: | 21405 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.49e-13 | 6 |
gut absorptive cell | 4.49e-13 | 6 |
enterocyte | 4.49e-13 | 6 |
columnar/cuboidal epithelial cell | 4.39e-11 | 7 |
intestinal epithelial cell | 1.98e-08 | 9 |
epithelial cell of alimentary canal | 1.98e-08 | 9 |
epithelial cell | 8.20e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.99e-36 | 31 |
gastrointestinal system | 9.47e-24 | 47 |
mucosa | 1.76e-15 | 15 |
digestive system | 1.27e-13 | 116 |
digestive tract | 1.27e-13 | 116 |
primitive gut | 1.27e-13 | 116 |
endoderm-derived structure | 2.97e-13 | 118 |
endoderm | 2.97e-13 | 118 |
presumptive endoderm | 2.97e-13 | 118 |
intestinal mucosa | 1.71e-12 | 13 |
wall of intestine | 1.71e-12 | 13 |
gastrointestinal system mucosa | 1.71e-12 | 13 |
subdivision of digestive tract | 6.34e-12 | 114 |
organ component layer | 9.81e-09 | 24 |
epithelium of mucosa | 1.98e-08 | 9 |
gastrointestinal system epithelium | 1.98e-08 | 9 |
intestinal epithelium | 1.98e-08 | 9 |
simple columnar epithelium | 9.63e-07 | 11 |