FFCP PHASE1:Mm9::chr13:55528159..55528172,-: Difference between revisions
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{{FFCP|EntrezGene=58992|HGNC=|MCL_coexpression_id=8|UniProt=Q80YC5|association_with_transcript=0bp_to_NM_021489,uc007qqv.2_5end|description=CAGE_peak_1_at_F12_5end|id=chr13:55528159..55528172,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!6.33e-21!22;UBERON:0007499!6.33e-21!22;UBERON:0006925!6.33e-21!22;UBERON:0009497!6.33e-21!22;UBERON:0000015!6.33e-21!22;UBERON:0002423!6.33e-21!22;UBERON:0006235!6.33e-21!22;UBERON:0008835!6.33e-21!22;UBERON:0003894!6.33e-21!22;UBERON:0004161!6.33e-21!22;UBERON:0008836!6.33e-21!22;UBERON:0009854!1.42e-19!23;UBERON:0009856!1.42e-19!23;UBERON:0002365!3.28e-17!25;UBERON:0002330!3.28e-17!25;UBERON:0005172!3.69e-17!49;UBERON:0005173!3.69e-17!49;UBERON:0002417!3.69e-17!49;UBERON:0000916!3.69e-17!49;UBERON:0009569!3.23e-11!66;UBERON:0005256!5.25e-11!47;UBERON:0005177!1.26e-09!85;UBERON:0003914!9.08e-08!47;UBERON:0000949!1.60e-07!72;UBERON:0005057!6.68e-07!51;UBERON:0002368!7.68e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.36e-27,22;UBERON:0007499,6.36e-27,22;UBERON:0006925,6.36e-27,22;UBERON:0009497,6.36e-27,22;UBERON:0000015,6.36e-27,22;UBERON:0002423,6.36e-27,22;UBERON:0006235,6.36e-27,22;UBERON:0008835,6.36e-27,22;UBERON:0003894,6.36e-27,22;UBERON:0004161,6.36e-27,22;UBERON:0008836,6.36e-27,22;UBERON:0009854,2.03e-25,23;UBERON:0009856,2.03e-25,23;UBERON:0002365,8.87e-23,25;UBERON:0002330,8.87e-23,25;UBERON:0005256,6.59e-17,45;UBERON:0005172,8.42e-15,49;UBERON:0005173,8.42e-15,49;UBERON:0002417,8.42e-15,49;UBERON:0000916,8.42e-15,49;UBERON:0002368,1.60e-10,60;UBERON:0003104,3.25e-10,61;UBERON:0009142,3.25e-10,61;UBERON:0002530,4.36e-09,65;UBERON:0003914,7.81e-09,47;UBERON:0009569,7.90e-09,66;UBERON:0000949,4.55e-08,72|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,124.761462162301,376.024147540386,331.917462857258,487.9820895032,385.751149790806,36.6559936543872,0,0,0,0,0,0,0,0,0,0,58.2337786567206,0,1.1875371125186,2.08182392119363,1.52232739156071,3.68984795609694,2.56228488939458,5.05631440683531,1.75933227861546,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,2.71268672104287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0.426576501070468,0.928946687441754,0.128867461322093,0,0,0.760902504450237,0,0.329397909448022,1.75934646160189,1.59165177632921,0.19496408711912,0,0,0,0,0.913988100877831,0,0,0,0.140271639780637,0.0632365371242573,0.295220295959204,0,0.246794327843601,330.544679202171,9.17648081438517,11.4004217165658,19.7878658898671,28.6032771157789,54.2648609442938,91.1560549377483,136.655665289135,144.786757510107,204.822814238309,81.9478777205921,224.400991444108,327.327519097174,287.182184225866,220.47942121843,322.272272270729,0,0.189491411770485,0.325929952884052,0,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,1.41538265394416,0.404810701674894,0,0,0,0,3.73937767701236,0,0,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0.922305443831782,0.516856586336442,0.727067458955011,1.42598951353889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.203319467126849,0.648032044930808,0.209088296014469,3.05707589244649,5.93403124093211,22.647046868742,0.26175594198403,0,0,0,0,0,0,0,0,0,5.59878854828985,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,2.56100408631201,3.16038732188782,2.93458427679175,2.94149613520023,8.44537565646138,6.79915688888351,5.13470735346904,9.6024940470243,7.60437899670719,6.41329560712659,7.67860361253036,7.81106859339405,7.52404643318534,8.57328644309533,7.88013416425017,11.767462448286,8.65380391686944,4.56316652416632,7.88599280486455,6.92155644021416,6.43777712857767,9.44751708110135,6.49354724865781,8.12300235760094,7.68297486065645,8.41823076601097,8.55565917228929,6.17256498823512,7.3553711236988,7.38783617816726,6.13846564754534,9.14127362997199,9.45242393807593,0,9.12333272937093,11.8179079726564,0.191288332068843,2.42650561031467,0.463735671240843|short_description=p1@F12}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:58992 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80YC5 | |||
|association_with_transcript=0bp_to_NM_021489,uc007qqv.2_5end | |||
|cluster_id=chr13:55528159..55528172,- | |||
|description=CAGE_peak_1_at_F12_5end | |||
|id=chr13:55528159..55528172,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.33e-21!22;UBERON:0007499!6.33e-21!22;UBERON:0006925!6.33e-21!22;UBERON:0009497!6.33e-21!22;UBERON:0000015!6.33e-21!22;UBERON:0002423!6.33e-21!22;UBERON:0006235!6.33e-21!22;UBERON:0008835!6.33e-21!22;UBERON:0003894!6.33e-21!22;UBERON:0004161!6.33e-21!22;UBERON:0008836!6.33e-21!22;UBERON:0009854!1.42e-19!23;UBERON:0009856!1.42e-19!23;UBERON:0002365!3.28e-17!25;UBERON:0002330!3.28e-17!25;UBERON:0005172!3.69e-17!49;UBERON:0005173!3.69e-17!49;UBERON:0002417!3.69e-17!49;UBERON:0000916!3.69e-17!49;UBERON:0009569!3.23e-11!66;UBERON:0005256!5.25e-11!47;UBERON:0005177!1.26e-09!85;UBERON:0003914!9.08e-08!47;UBERON:0000949!1.60e-07!72;UBERON:0005057!6.68e-07!51;UBERON:0002368!7.68e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.36e-27,22;UBERON:0007499,6.36e-27,22;UBERON:0006925,6.36e-27,22;UBERON:0009497,6.36e-27,22;UBERON:0000015,6.36e-27,22;UBERON:0002423,6.36e-27,22;UBERON:0006235,6.36e-27,22;UBERON:0008835,6.36e-27,22;UBERON:0003894,6.36e-27,22;UBERON:0004161,6.36e-27,22;UBERON:0008836,6.36e-27,22;UBERON:0009854,2.03e-25,23;UBERON:0009856,2.03e-25,23;UBERON:0002365,8.87e-23,25;UBERON:0002330,8.87e-23,25;UBERON:0005256,6.59e-17,45;UBERON:0005172,8.42e-15,49;UBERON:0005173,8.42e-15,49;UBERON:0002417,8.42e-15,49;UBERON:0000916,8.42e-15,49;UBERON:0002368,1.60e-10,60;UBERON:0003104,3.25e-10,61;UBERON:0009142,3.25e-10,61;UBERON:0002530,4.36e-09,65;UBERON:0003914,7.81e-09,47;UBERON:0009569,7.90e-09,66;UBERON:0000949,4.55e-08,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,124.761462162301,376.024147540386,331.917462857258,487.9820895032,385.751149790806,36.6559936543872,0,0,0,0,0,0,0,0,0,0,58.2337786567206,0,1.1875371125186,2.08182392119363,1.52232739156071,3.68984795609694,2.56228488939458,5.05631440683531,1.75933227861546,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,2.71268672104287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0.426576501070468,0.928946687441754,0.128867461322093,0,0,0.760902504450237,0,0.329397909448022,1.75934646160189,1.59165177632921,0.19496408711912,0,0,0,0,0.913988100877831,0,0,0,0.140271639780637,0.0632365371242573,0.295220295959204,0,0.246794327843601,330.544679202171,9.17648081438517,11.4004217165658,19.7878658898671,28.6032771157789,54.2648609442938,91.1560549377483,136.655665289135,144.786757510107,204.822814238309,81.9478777205921,224.400991444108,327.327519097174,287.182184225866,220.47942121843,322.272272270729,0,0.189491411770485,0.325929952884052,0,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,1.41538265394416,0.404810701674894,0,0,0,0,3.73937767701236,0,0,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0.922305443831782,0.516856586336442,0.727067458955011,1.42598951353889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.203319467126849,0.648032044930808,0.209088296014469,3.05707589244649,5.93403124093211,22.647046868742,0.26175594198403,0,0,0,0,0,0,0,0,0,5.59878854828985,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,2.56100408631201,3.16038732188782,2.93458427679175,2.94149613520023,8.44537565646138,6.79915688888351,5.13470735346904,9.6024940470243,7.60437899670719,6.41329560712659,7.67860361253036,7.81106859339405,7.52404643318534,8.57328644309533,7.88013416425017,11.767462448286,8.65380391686944,4.56316652416632,7.88599280486455,6.92155644021416,6.43777712857767,9.44751708110135,6.49354724865781,8.12300235760094,7.68297486065645,8.41823076601097,8.55565917228929,6.17256498823512,7.3553711236988,7.38783617816726,6.13846564754534,9.14127362997199,9.45242393807593,0,9.12333272937093,11.8179079726564,0.191288332068843,2.42650561031467,0.463735671240843 | |||
|short_description=p1@F12 | |||
}} |
Revision as of 03:57, 6 August 2015
Short description: | p1@F12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_F12_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_NM_021489, uc007qqv.2_5end |
EntrezGene: | 58992 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 6.36e-27 | 22 |
epithelial sac | 6.36e-27 | 22 |
digestive gland | 6.36e-27 | 22 |
epithelium of foregut-midgut junction | 6.36e-27 | 22 |
anatomical boundary | 6.36e-27 | 22 |
hepatobiliary system | 6.36e-27 | 22 |
foregut-midgut junction | 6.36e-27 | 22 |
hepatic diverticulum | 6.36e-27 | 22 |
liver primordium | 6.36e-27 | 22 |
septum transversum | 6.36e-27 | 22 |
liver bud | 6.36e-27 | 22 |
digestive tract diverticulum | 2.03e-25 | 23 |
sac | 2.03e-25 | 23 |
exocrine gland | 8.87e-23 | 25 |
exocrine system | 8.87e-23 | 25 |
trunk mesenchyme | 6.59e-17 | 45 |
abdomen element | 8.42e-15 | 49 |
abdominal segment element | 8.42e-15 | 49 |
abdominal segment of trunk | 8.42e-15 | 49 |
abdomen | 8.42e-15 | 49 |
endocrine gland | 1.60e-10 | 60 |
mesenchyme | 3.25e-10 | 61 |
entire embryonic mesenchyme | 3.25e-10 | 61 |
gland | 4.36e-09 | 65 |
epithelial tube | 7.81e-09 | 47 |
subdivision of trunk | 7.90e-09 | 66 |
endocrine system | 4.55e-08 | 72 |