FFCP PHASE1:Mm9::chr1:89984446..89984456,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=28|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:89984446..89984456,+|id=chr1:89984446..89984456,+|ontology_enrichment_celltype=CL:0002092!4.61e-11!3;CL:0002540!4.61e-11!3;CL:0002494!1.14e-10!3;CL:0000737!1.14e-10!3;CL:0000746!1.14e-10!3;CL:0000513!1.14e-10!3;CL:0002194!2.46e-08!4;CL:0000766!2.46e-08!4;CL:0000576!2.46e-08!4;CL:0000235!2.46e-08!4;CL:0002009!2.46e-08!4;CL:0000040!2.46e-08!4;CL:0000559!2.46e-08!4|ontology_enrichment_celltype_v019_2=CL:0002476,5.17e-12,2;CL:0002092,1.34e-08,3;CL:0002540,1.34e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!4.01e-08!32;UBERON:0002371!8.99e-08!16|ontology_enrichment_uberon_v019_2=UBERON:0000970,9.02e-11,9;UBERON:0000019,9.02e-11,9;UBERON:0000047,9.02e-11,9;UBERON:0010312,9.02e-11,9;UBERON:0004088,9.02e-11,9;UBERON:0002104,9.02e-11,9;UBERON:0001456,9.02e-11,9;UBERON:0003072,9.02e-11,9;UBERON:0004128,9.02e-11,9;UBERON:0003071,9.02e-11,9;UBERON:0001444,5.29e-09,11;UBERON:0000020,2.45e-08,12;UBERON:0001032,2.45e-08,12;UBERON:0004456,2.45e-08,12;UBERON:0000033,8.98e-08,13;UBERON:0005085,8.98e-08,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,2.96659908770092,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.993581047372,0,0,0,0,0,0,0,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:89984446..89984456,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:89984446..89984456,+ | |||
|description=CAGE_peak_at_chr1:89984446..89984456,+ | |||
|id=chr1:89984446..89984456,+ | |||
|ontology_enrichment_celltype=CL:0002092!4.61e-11!3;CL:0002540!4.61e-11!3;CL:0002494!1.14e-10!3;CL:0000737!1.14e-10!3;CL:0000746!1.14e-10!3;CL:0000513!1.14e-10!3;CL:0002194!2.46e-08!4;CL:0000766!2.46e-08!4;CL:0000576!2.46e-08!4;CL:0000235!2.46e-08!4;CL:0002009!2.46e-08!4;CL:0000040!2.46e-08!4;CL:0000559!2.46e-08!4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,5.17e-12,2;CL:0002092,1.34e-08,3;CL:0002540,1.34e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.01e-08!32;UBERON:0002371!8.99e-08!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,9.02e-11,9;UBERON:0000019,9.02e-11,9;UBERON:0000047,9.02e-11,9;UBERON:0010312,9.02e-11,9;UBERON:0004088,9.02e-11,9;UBERON:0002104,9.02e-11,9;UBERON:0001456,9.02e-11,9;UBERON:0003072,9.02e-11,9;UBERON:0004128,9.02e-11,9;UBERON:0003071,9.02e-11,9;UBERON:0001444,5.29e-09,11;UBERON:0000020,2.45e-08,12;UBERON:0001032,2.45e-08,12;UBERON:0004456,2.45e-08,12;UBERON:0000033,8.98e-08,13;UBERON:0005085,8.98e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,2.96659908770092,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.993581047372,0,0,0,0,0,0,0,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:89984446..89984456,+ | |||
}} |
Latest revision as of 04:15, 6 August 2015
Short description: | p@chr1:89984446..89984456, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:89984446..89984456, + |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 5.17e-12 | 2 |
bone marrow cell | 1.34e-08 | 3 |
mesenchymal stem cell of the bone marrow | 1.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 9.02e-11 | 9 |
camera-type eye | 9.02e-11 | 9 |
simple eye | 9.02e-11 | 9 |
immature eye | 9.02e-11 | 9 |
ocular region | 9.02e-11 | 9 |
visual system | 9.02e-11 | 9 |
face | 9.02e-11 | 9 |
optic cup | 9.02e-11 | 9 |
optic vesicle | 9.02e-11 | 9 |
eye primordium | 9.02e-11 | 9 |
subdivision of head | 5.29e-09 | 11 |
sense organ | 2.45e-08 | 12 |
sensory system | 2.45e-08 | 12 |
entire sense organ system | 2.45e-08 | 12 |
head | 8.98e-08 | 13 |
ectodermal placode | 8.98e-08 | 13 |