FFCP PHASE1:Mm9::chr1:92954465..92954475,+: Difference between revisions
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|id=chr1:92954465..92954475,+
|short_description=p@chr1:92954465..92954475,+
|description=CAGE_peak_at_chr1:92954465..92954475,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=260 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:92954465..92954475,+ | |||
|description=CAGE_peak_at_chr1:92954465..92954475,+ | |||
|id=chr1:92954465..92954475,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.96e-22!12;CL:0000542!1.99e-20!13;CL:0000051!1.99e-20!13;CL:0000084!2.56e-19!11;CL:0000827!2.56e-19!11;CL:0000791!2.74e-18!9;CL:0000789!2.74e-18!9;CL:0002420!2.74e-18!9;CL:0002419!2.74e-18!9;CL:0000790!2.74e-18!9;CL:0002031!1.29e-17!25;CL:0000988!1.52e-15!32;CL:0002032!1.52e-15!32;CL:0000037!1.52e-15!32;CL:0000566!1.52e-15!32;CL:0000837!1.52e-15!32;CL:0000624!2.62e-15!8;CL:0000738!2.91e-15!17;CL:0002087!2.91e-15!17;CL:0000893!2.05e-14!6;CL:0002489!2.05e-14!6;CL:0000898!2.05e-14!6;CL:0000809!2.05e-14!6;CL:0000810!2.05e-14!6;CL:0000895!2.05e-14!6;CL:0000808!2.05e-14!6;CL:0000894!2.05e-14!6;CL:0000806!2.05e-14!6;CL:0000807!2.05e-14!6;CL:0000805!2.05e-14!6;CL:0002425!2.05e-14!6;CL:0002436!2.05e-14!6;CL:0002427!2.05e-14!6;CL:0002428!2.05e-14!6;CL:0002429!2.05e-14!6;CL:0002433!2.05e-14!6;CL:0002431!2.05e-14!6;CL:0002432!2.05e-14!6;CL:0002320!4.85e-10!46;CL:0000134!4.85e-10!46;CL:0000219!3.51e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,8.53e-11,6;CL:0002489,8.53e-11,6;CL:0000898,8.53e-11,6;CL:0000809,8.53e-11,6;CL:0000810,8.53e-11,6;CL:0000895,8.53e-11,6;CL:0000808,8.53e-11,6;CL:0000894,8.53e-11,6;CL:0000806,8.53e-11,6;CL:0000807,8.53e-11,6;CL:0000805,8.53e-11,6;CL:0002425,8.53e-11,6;CL:0002436,8.53e-11,6;CL:0002427,8.53e-11,6;CL:0002428,8.53e-11,6;CL:0002429,8.53e-11,6;CL:0002433,8.53e-11,6;CL:0002431,8.53e-11,6;CL:0002432,8.53e-11,6;CL:0000624,2.44e-08,8;CL:0000791,1.63e-07,9;CL:0000789,1.63e-07,9;CL:0002420,1.63e-07,9;CL:0002419,1.63e-07,9;CL:0000790,1.63e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.50e-12!23;UBERON:0000974!1.50e-12!23;UBERON:0004807!1.50e-12!23;UBERON:0005058!1.50e-12!23;UBERON:0003351!1.50e-12!23;UBERON:0009113!1.50e-12!23;UBERON:0003295!1.50e-12!23;UBERON:0009722!1.50e-12!23;UBERON:0005562!1.50e-12!23;UBERON:0007690!1.50e-12!23;UBERON:0006562!5.89e-12!24;UBERON:0003408!5.89e-12!24;UBERON:0001557!5.89e-12!24;UBERON:0001042!5.89e-12!24;UBERON:0008814!5.89e-12!24;UBERON:0009145!5.89e-12!24;UBERON:0000072!1.95e-10!27;UBERON:0002384!4.85e-10!46;UBERON:0002390!7.71e-10!45;UBERON:0003061!7.71e-10!45;UBERON:0004177!1.34e-09!29;UBERON:0002193!4.52e-09!48;UBERON:0000063!1.16e-07!35 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,2.67498572088167,3.7450324211519,0.171217968225505,0.159544317990673,0,0.34968160967599,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,0,1.76469446409304,4.78131839470912,2.42755176515577,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.903863264091034,2.67498572088167,3.7450324211519,0.171217968225505,0.159544317990673,0,0.34968160967599,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,0,1.76469446409304,4.78131839470912,2.42755176515577,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:92954465..92954475,+ | |||
}} | }} |
Latest revision as of 04:54, 6 August 2015
Short description: | p@chr1:92954465..92954475, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:92954465..92954475, + |
Coexpression cluster: | MCL_coexpression_mm9:260 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 8.53e-11 | 6 |
double negative thymocyte | 8.53e-11 | 6 |
naive T cell | 8.53e-11 | 6 |
double-positive, alpha-beta thymocyte | 8.53e-11 | 6 |
CD4-positive, alpha-beta thymocyte | 8.53e-11 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 8.53e-11 | 6 |
DN4 thymocyte | 8.53e-11 | 6 |
DN1 thymic pro-T cell | 8.53e-11 | 6 |
DN2 thymocyte | 8.53e-11 | 6 |
DN3 thymocyte | 8.53e-11 | 6 |
immature single positive thymocyte | 8.53e-11 | 6 |
early T lineage precursor | 8.53e-11 | 6 |
mature CD4 single-positive thymocyte | 8.53e-11 | 6 |
resting double-positive thymocyte | 8.53e-11 | 6 |
double-positive blast | 8.53e-11 | 6 |
CD69-positive double-positive thymocyte | 8.53e-11 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 8.53e-11 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 8.53e-11 | 6 |
CD24-positive, CD4 single-positive thymocyte | 8.53e-11 | 6 |
CD4-positive, alpha-beta T cell | 2.44e-08 | 8 |
mature alpha-beta T cell | 1.63e-07 | 9 |
alpha-beta T cell | 1.63e-07 | 9 |
immature T cell | 1.63e-07 | 9 |
mature T cell | 1.63e-07 | 9 |
immature alpha-beta T cell | 1.63e-07 | 9 |