Personal tools

FFCP PHASE1:Mm9::chr16:22894900..22894910,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=5
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr16:22894900..22894910,+
|description=CAGE_peak_at_chr16:22894900..22894910,+
|description=CAGE_peak_at_chr16:22894900..22894910,+
|id=chr16:22894900..22894910,+
|id=chr16:22894900..22894910,+
|ontology_enrichment_celltype=CL:0000181!7.48e-07!5;CL:0000417!7.48e-07!5;CL:0000668!7.48e-07!5;CL:0000412!7.48e-07!5;CL:0000182!7.48e-07!5
|ontology_enrichment_celltype=CL:0000181!7.48e-07!5;CL:0000417!7.48e-07!5;CL:0000668!7.48e-07!5;CL:0000412!7.48e-07!5;CL:0000182!7.48e-07!5
|ontology_enrichment_celltype_v019_2=CL:0000182,2.77e-17,5
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!2.79e-28!22;UBERON:0007499!2.79e-28!22;UBERON:0006925!2.79e-28!22;UBERON:0009497!2.79e-28!22;UBERON:0000015!2.79e-28!22;UBERON:0002423!2.79e-28!22;UBERON:0006235!2.79e-28!22;UBERON:0008835!2.79e-28!22;UBERON:0003894!2.79e-28!22;UBERON:0004161!2.79e-28!22;UBERON:0008836!2.79e-28!22;UBERON:0009854!8.40e-27!23;UBERON:0009856!8.40e-27!23;UBERON:0002365!3.34e-24!25;UBERON:0002330!3.34e-24!25;UBERON:0005256!1.48e-11!47;UBERON:0005172!7.35e-11!49;UBERON:0005173!7.35e-11!49;UBERON:0002417!7.35e-11!49;UBERON:0000916!7.35e-11!49;UBERON:0003914!2.52e-10!47;UBERON:0005057!4.10e-09!51;UBERON:0003929!4.36e-08!55;UBERON:0002368!6.81e-08!60;UBERON:0002530!6.79e-07!65
|ontology_enrichment_uberon=UBERON:0002107!2.79e-28!22;UBERON:0007499!2.79e-28!22;UBERON:0006925!2.79e-28!22;UBERON:0009497!2.79e-28!22;UBERON:0000015!2.79e-28!22;UBERON:0002423!2.79e-28!22;UBERON:0006235!2.79e-28!22;UBERON:0008835!2.79e-28!22;UBERON:0003894!2.79e-28!22;UBERON:0004161!2.79e-28!22;UBERON:0008836!2.79e-28!22;UBERON:0009854!8.40e-27!23;UBERON:0009856!8.40e-27!23;UBERON:0002365!3.34e-24!25;UBERON:0002330!3.34e-24!25;UBERON:0005256!1.48e-11!47;UBERON:0005172!7.35e-11!49;UBERON:0005173!7.35e-11!49;UBERON:0002417!7.35e-11!49;UBERON:0000916!7.35e-11!49;UBERON:0003914!2.52e-10!47;UBERON:0005057!4.10e-09!51;UBERON:0003929!4.36e-08!55;UBERON:0002368!6.81e-08!60;UBERON:0002530!6.79e-07!65
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.58e-66,22;UBERON:0007499,1.58e-66,22;UBERON:0006925,1.58e-66,22;UBERON:0009497,1.58e-66,22;UBERON:0000015,1.58e-66,22;UBERON:0002423,1.58e-66,22;UBERON:0006235,1.58e-66,22;UBERON:0008835,1.58e-66,22;UBERON:0003894,1.58e-66,22;UBERON:0004161,1.58e-66,22;UBERON:0008836,1.58e-66,22;UBERON:0009854,1.46e-63,23;UBERON:0009856,1.46e-63,23;UBERON:0002365,2.45e-58,25;UBERON:0002330,2.45e-58,25;UBERON:0005256,1.34e-31,45;UBERON:0003914,3.58e-30,47;UBERON:0005172,7.30e-29,49;UBERON:0005173,7.30e-29,49;UBERON:0002417,7.30e-29,49;UBERON:0000916,7.30e-29,49;UBERON:0003929,1.67e-25,55;UBERON:0002368,3.25e-23,60;UBERON:0003104,8.42e-23,61;UBERON:0009142,8.42e-23,61;UBERON:0002530,2.82e-21,65;UBERON:0000490,6.36e-21,66;UBERON:0009569,6.36e-21,66;UBERON:0005911,6.32e-20,69;UBERON:0000949,5.19e-19,72;UBERON:0005177,3.81e-17,79;UBERON:0001041,6.62e-17,80;UBERON:0002100,8.53e-15,90;UBERON:0000025,3.15e-11,114;UBERON:0004921,3.15e-11,114;UBERON:0001007,5.36e-11,116;UBERON:0001555,5.36e-11,116;UBERON:0007026,5.36e-11,116;UBERON:0004119,8.98e-11,118;UBERON:0000925,8.98e-11,118;UBERON:0006595,8.98e-11,118;UBERON:0004111,2.39e-10,122;UBERON:0001048,3.21e-09,134
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,8.15965600449301,3.2382191498269,15.5946340187441,10.7526452903361,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0.166845105716094,0,0,0.202860121388503,1.20588579876208,3.56476192493988,2.87696137450811,24.6445544698054,9.88421087477093,58.9449646762154,14.1413560114031,12.793544597697,4.54641980304801,3.22915344339442,7.23665282045051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.495920734352016,0,0,0,0,0.149516546043979,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.505394423527595,0,0.188626341386076,0.37456602987953,0.128050304809739,0.516919220600519,0.952587382566147,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0.548783918618318,0,0.543216455383447,0,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0,0,0.233931608445408,0.644613162144895,0,0.220591419119515,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,8.15965600449301,3.2382191498269,15.5946340187441,10.7526452903361,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0.166845105716094,0,0,0.202860121388503,1.20588579876208,3.56476192493988,2.87696137450811,24.6445544698054,9.88421087477093,58.9449646762154,14.1413560114031,12.793544597697,4.54641980304801,3.22915344339442,7.23665282045051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.495920734352016,0,0,0,0,0.149516546043979,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.505394423527595,0,0.188626341386076,0.37456602987953,0.128050304809739,0.516919220600519,0.952587382566147,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0.548783918618318,0,0.543216455383447,0,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0,0,0.233931608445408,0.644613162144895,0,0.220591419119515,0
|short_description=p@chr16:22894900..22894910,+
|short_description=p@chr16:22894900..22894910,+
}}
}}

Latest revision as of 04:56, 6 August 2015

Short description:p@chr16:22894900..22894910, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr16:22894900..22894910, +
Coexpression cluster:MCL_coexpression_mm9:5
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
10
20
30
40
50
60
70




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data