FFCP PHASE1:Mm9::chr13:6108343..6108354,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:6108343..6108354,- | |||
|description=CAGE_peak_at_chr13:6108343..6108354,- | |description=CAGE_peak_at_chr13:6108343..6108354,- | ||
|id=chr13:6108343..6108354,- | |id=chr13:6108343..6108354,- | ||
|ontology_enrichment_celltype=CL:0000239!2.00e-16!6;CL:0000677!2.00e-16!6;CL:0000212!2.00e-16!6;CL:0000584!2.00e-16!6;CL:0000075!5.56e-14!7;CL:0002563!1.02e-10!9;CL:0002251!1.02e-10!9;CL:0000473!6.44e-09!3;CL:0000627!6.44e-09!3;CL:0000682!6.44e-09!3;CL:0000066!1.70e-07!25;CL:0000325!3.27e-07!2;CL:0000217!3.27e-07!2;CL:0000328!3.27e-07!2;CL:0002573!3.27e-07!2;CL:0002376!3.27e-07!2;CL:0000218!3.27e-07!2;CL:0000692!3.27e-07!2;CL:0002377!3.27e-07!2;CL:0002375!3.27e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.47e-19,6;CL:0000677,9.47e-19,6;CL:0000584,9.47e-19,6;CL:0000075,4.67e-16,7;CL:0000682,1.66e-13,3;CL:0002563,1.85e-12,9;CL:0002251,1.85e-12,9;CL:0000217,9.58e-11,2;CL:0000328,9.58e-11,2;CL:0002573,9.58e-11,2;CL:0002376,9.58e-11,2;CL:0000218,9.58e-11,2;CL:0000692,9.58e-11,2;CL:0002377,9.58e-11,2;CL:0002375,9.58e-11,2;CL:0000066,2.27e-10,25;CL:0000215,1.97e-07,3;CL:0002076,2.12e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.49e-20!15;UBERON:0001242!2.42e-16!13;UBERON:0000060!2.42e-16!13;UBERON:0001262!2.42e-16!13;UBERON:0004786!2.42e-16!13;UBERON:0004923!5.49e-12!24;UBERON:0000160!1.81e-11!43;UBERON:0003350!1.02e-10!9;UBERON:0004808!1.02e-10!9;UBERON:0001277!1.02e-10!9;UBERON:0000331!1.62e-09!3;UBERON:0002116!1.62e-09!3;UBERON:0001204!1.62e-09!3;UBERON:0001168!1.62e-09!3;UBERON:0000010!1.14e-08!11;UBERON:0000011!1.19e-08!3;UBERON:0000485!1.21e-08!11;UBERON:0005409!1.37e-08!59;UBERON:0001155!9.27e-07!2;UBERON:0000059!9.27e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.66e-23,15;UBERON:0000160,2.20e-22,31;UBERON:0001242,1.91e-21,13;UBERON:0001262,1.91e-21,13;UBERON:0004786,1.91e-21,13;UBERON:0000331,1.77e-14,3;UBERON:0002116,1.77e-14,3;UBERON:0001204,1.77e-14,3;UBERON:0001168,1.77e-14,3;UBERON:0005409,4.68e-14,47;UBERON:0004923,5.99e-14,24;UBERON:0003350,1.85e-12,9;UBERON:0004808,1.85e-12,9;UBERON:0001277,1.85e-12,9;UBERON:0002108,5.47e-11,4;UBERON:0000485,3.65e-10,11;UBERON:0001155,5.16e-10,2;UBERON:0000059,5.16e-10,2 | |||
|phase1_expression=0,2.44282785347553,3.18499467572675,2.11724947914781,2.50447864973174,0.16787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,1.14704640533585,1.14846392823004,1.7230479846363,1.939241094173,4.56056206695297,3.02436155711917,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92220256665696,9.74873125377533,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79763881730844,1.29682829924817,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.716906393857656,2.22798674082394,0.566153061577665,0,0.876767573733936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,3.18499467572675,2.11724947914781,2.50447864973174,0.16787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,1.14704640533585,1.14846392823004,1.7230479846363,1.939241094173,4.56056206695297,3.02436155711917,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92220256665696,9.74873125377533,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79763881730844,1.29682829924817,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.716906393857656,2.22798674082394,0.566153061577665,0,0.876767573733936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:6108343..6108354,- | |short_description=p@chr13:6108343..6108354,- | ||
}} | }} |
Latest revision as of 05:51, 6 August 2015
Short description: | p@chr13:6108343..6108354, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:6108343..6108354, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.47e-19 | 6 |
gut absorptive cell | 9.47e-19 | 6 |
enterocyte | 9.47e-19 | 6 |
columnar/cuboidal epithelial cell | 4.67e-16 | 7 |
M cell of gut | 1.66e-13 | 3 |
intestinal epithelial cell | 1.85e-12 | 9 |
epithelial cell of alimentary canal | 1.85e-12 | 9 |
insulating cell | 9.58e-11 | 2 |
myelin accumulating cell | 9.58e-11 | 2 |
Schwann cell | 9.58e-11 | 2 |
non-myelinating Schwann cell | 9.58e-11 | 2 |
myelinating Schwann cell;;Schwann cell | 9.58e-11 | 2 |
terminal Schwann cell | 9.58e-11 | 2 |
immature Schwann cell | 9.58e-11 | 2 |
Schwann cell precursor | 9.58e-11 | 2 |
epithelial cell | 2.27e-10 | 25 |
barrier cell | 1.97e-07 | 3 |
endo-epithelial cell | 2.12e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.66e-23 | 15 |
intestine | 2.20e-22 | 31 |
intestinal mucosa | 1.91e-21 | 13 |
wall of intestine | 1.91e-21 | 13 |
gastrointestinal system mucosa | 1.91e-21 | 13 |
ileal mucosa | 1.77e-14 | 3 |
ileum | 1.77e-14 | 3 |
mucosa of small intestine | 1.77e-14 | 3 |
wall of small intestine | 1.77e-14 | 3 |
gastrointestinal system | 4.68e-14 | 47 |
organ component layer | 5.99e-14 | 24 |
epithelium of mucosa | 1.85e-12 | 9 |
gastrointestinal system epithelium | 1.85e-12 | 9 |
intestinal epithelium | 1.85e-12 | 9 |
small intestine | 5.47e-11 | 4 |
simple columnar epithelium | 3.65e-10 | 11 |
colon | 5.16e-10 | 2 |
large intestine | 5.16e-10 | 2 |