FFCP PHASE1:Mm9::chr3:151828843..151828930,-: Difference between revisions
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{{FFCP|EntrezGene=54120|HGNC=|MCL_coexpression_id=12|UniProt=Q9Z2H7|association_with_transcript=0bp_to_NM_016867,uc008rsp.1_5end|description=CAGE_peak_1_at_Gipc2_5end|id=chr3:151828843..151828930,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,3.12e-07,9;CL:0002251,3.12e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.13e-13!43;UBERON:0005409!3.11e-13!59;UBERON:0004119!5.28e-12!130;UBERON:0000925!5.28e-12!130;UBERON:0006595!5.28e-12!130;UBERON:0001007!2.34e-11!128;UBERON:0001555!2.34e-11!128;UBERON:0007026!2.34e-11!128;UBERON:0000344!1.25e-10!15;UBERON:0004921!2.04e-10!126;UBERON:0004185!2.04e-10!126;UBERON:0001242!2.47e-09!13;UBERON:0000060!2.47e-09!13;UBERON:0001262!2.47e-09!13;UBERON:0004786!2.47e-09!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.77e-21,31;UBERON:0005409,1.73e-19,47;UBERON:0004119,4.47e-15,118;UBERON:0000925,4.47e-15,118;UBERON:0006595,4.47e-15,118;UBERON:0001007,2.60e-14,116;UBERON:0001555,2.60e-14,116;UBERON:0007026,2.60e-14,116;UBERON:0004921,3.56e-13,114;UBERON:0000344,1.17e-11,15;UBERON:0001242,3.25e-10,13;UBERON:0001262,3.25e-10,13;UBERON:0004786,3.25e-10,13;UBERON:0004923,2.47e-07,24;UBERON:0003350,3.12e-07,9;UBERON:0004808,3.12e-07,9;UBERON:0001277,3.12e-07,9|phase1_expression=0.960893082628764,339.902047040738,405.859321535466,378.080264133538,413.739872935683,108.953647470816,115.171031813594,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,27.2988961384934,0,0,270.06720967527,283.091052836888,349.707266146047,288.179775430421,233.139873766132,380.046838912748,317.557963497513,225.27819882579,0,0,0,86.0777826858798,91.5952895925293,73.7051376107152,0,0,0,0,0,0,0,0,0,0,0.65407546914134,2.63623419281366,0.777719596297134,0.699932108126813,2.87505128729943,0,0,0,0,0.85960031981627,0.515672092277442,1.61853168687678,1.5869729378161,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0,0,0,0.856952953211411,0.883474163806454,0.244981598429908,0.191690942036473,0,0,0.127687338085188,0.768032666281217,1.45074916503213,2.01272815925301,1.56274011167028,1.3959149950069,0,0.61119299110724,0.883885756421003,1.28134512719193,1.4911955666024,0.37863096666592,1.66257432234928,8.11620568364698,0.860423876981386,0,0,0,0,25.4204400438471,0,0,0,3.23939865486365,0,0,0,49.7929394325792,39.0174192831652,31.3425155909166,55.8359171826203,0,0.593768556259299,1.04091196059682,0.913396434936424,2.53677046981664,0.753613202763113,0.23517741427141,0.628332956648377,206.902187993671,0.289198713839823,0,0,0,0,206.894854952116,1.46390398505774,2.72280718857492,204.365644166873,0,0,0,0.898743836428936,0.915001205637253,0.125654352112864,0.347648640384553,0.511430914660661,0,0.162241263067758,4.17541391786297,2.61254638281195,4.54900965180614,1.68353484709179,0.390361328888111,0.459804208866946,0.180062129805349,1.05493372485001,0.884474488967262,0.512454881139399,0.374806898238915,0.258703370739016,1.72454394346274,2.08016688184601,0.879755620819744,0.219195732427575,1.66828349535359,0,0,1.59227413454795,0,0,0,0.621377317606506,0.703578179943289,0.720248245844059,0.710234206755631,1.57411385397923,1.54267112887378,0.697601834251224,0.536546802799238,1.63471479314037,1.81015834904829,1.97000956894914,1.62137619091711,2.63159977365598,2.63460138349261,1.47627060636409,0.210289948564127,0,399.806727410396,172.157318897967,10.024547775156,19.7401171081373,53.2222615260245,99.4299776393079,126.088350860041,141.718091453857,185.06633400236,184.627528245616,150.801125280162,126.13840327409,144.07846038103,160.888674149106,204.466595181461,220.648530765839,4.55202962287396,9.59687505921722,16.9061603509621,21.9943434072939,30.062635510982,41.9412202944105,63.9321390326241,100.22729047815,118.063043336714,134.749703002606,1.1858105083486,6.50695912292767,9.63139076054695,9.89393294493356,15.8230894683032,12.7823894668781,14.0044218479781,18.9879450717535,2.10775794807546,3.29473695825698,4.31304619582064,8.93138274404408,2.49630138491648,1.01031551178845,1.07638448113147,0.482443521363367,40.2761954563198,1.13694847062291,2.11854469374634,4.2436271443797,2.34690248288502,10.887906733718,20.9478403979692,31.2213836572478,31.9999342535568,22.1464689648775,23.5993057613081,30.1508499076958,30.3925568083976,35.8729665282149,0,0,0,0.551873492609465,0.160550589987792,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,1.42452482933804,0.651547837414304,2.3095817216155,0,4.61283208694465,5.13950046840077,2.45186603682668,1.18120757152309,0.922305443831782,39.5395288547378,0,1.78248689192361,0.316036757935816,0,0,3.06395645178409,2.88097750450096,2.71653235943784,1.50035924522115,1.24138163549592,0.891844088010353,0.822745103010605,0.304464949114599,19.0084083531605,18.0057260234247,1.7642271844397,1.48397627647332,0.161464426695906,0.120625849856312,0.716234064018819,2.1338316966858,141.951167438737,0.927126510052548,0.170870880797853,0,0.185194527369712,0,0,0,0,0.139951452323658,0,121.243168487919,8.06656783631895,15.0456405673868,34.9937304262636,28.0178316659388,51.5335650440979,30.8839353221239,28.6807491366916,62.5596701341831,315.22361504564,2.4853572523477,0,0.299033092087958,0,0,0.258319646955462,0,0.469428954583016,0.651021924219751,0.314578033277133,0,0.864090018773596,3.16011120628178,0.202725215290164,0.205421914329655,0,0.179026695667481,0.596044064343795,0.721172697119813,0.590758108698309,0.302899349844443,0.533447646584999,0.504130925684203,1.75424185331554,0.577271049841977,1.40252282617883,0.680191150845634,4.21773311410723,0.0897138566094757,5.87596157274275,4.44336066274038,10.1348536743638,3.11357761254351,6.00231461421384,0.501572104035363,1.12950368523413,0,0,0.171853182343688,0,0,0,2.70192721934532,0.453142408984205,0.51776031175182,0.830298780673413,3.59122386060928,3.07320490357441,2.43106717068294,9.4325923182592,12.1336715577009,13.5570503958985,11.743998262617,15.0832028508153,10.8659801058433,10.3926512954998,12.0720858487089,9.27050923951836,11.4605022804716,10.9127391015665,11.9073422820768,12.1678542242098,11.3816440073586,14.835092428919,14.5726930933053,11.3146853287187,11.1809757880383,10.9680647375768,13.6625631634389,11.104906889009,11.9306597127264,10.9756783723664,13.1534855718921,12.3581743599734,7.2948495315506,10.3212465768031,11.7220334026921,10.2307760792422,12.0850736125053,8.10207766120794,1.74867404556562,13.3341016813883,10.9584237564632,1.14772999241306,0.220591419119515,0.463735671240843|short_description=p1@Gipc2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54120 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z2H7 | |||
|association_with_transcript=0bp_to_NM_016867,uc008rsp.1_5end | |||
|cluster_id=chr3:151828843..151828930,- | |||
|description=CAGE_peak_1_at_Gipc2_5end | |||
|id=chr3:151828843..151828930,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.12e-07,9;CL:0002251,3.12e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.13e-13!43;UBERON:0005409!3.11e-13!59;UBERON:0004119!5.28e-12!130;UBERON:0000925!5.28e-12!130;UBERON:0006595!5.28e-12!130;UBERON:0001007!2.34e-11!128;UBERON:0001555!2.34e-11!128;UBERON:0007026!2.34e-11!128;UBERON:0000344!1.25e-10!15;UBERON:0004921!2.04e-10!126;UBERON:0004185!2.04e-10!126;UBERON:0001242!2.47e-09!13;UBERON:0000060!2.47e-09!13;UBERON:0001262!2.47e-09!13;UBERON:0004786!2.47e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.77e-21,31;UBERON:0005409,1.73e-19,47;UBERON:0004119,4.47e-15,118;UBERON:0000925,4.47e-15,118;UBERON:0006595,4.47e-15,118;UBERON:0001007,2.60e-14,116;UBERON:0001555,2.60e-14,116;UBERON:0007026,2.60e-14,116;UBERON:0004921,3.56e-13,114;UBERON:0000344,1.17e-11,15;UBERON:0001242,3.25e-10,13;UBERON:0001262,3.25e-10,13;UBERON:0004786,3.25e-10,13;UBERON:0004923,2.47e-07,24;UBERON:0003350,3.12e-07,9;UBERON:0004808,3.12e-07,9;UBERON:0001277,3.12e-07,9 | |||
|phase1_expression=0.960893082628764,339.902047040738,405.859321535466,378.080264133538,413.739872935683,108.953647470816,115.171031813594,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,27.2988961384934,0,0,270.06720967527,283.091052836888,349.707266146047,288.179775430421,233.139873766132,380.046838912748,317.557963497513,225.27819882579,0,0,0,86.0777826858798,91.5952895925293,73.7051376107152,0,0,0,0,0,0,0,0,0,0,0.65407546914134,2.63623419281366,0.777719596297134,0.699932108126813,2.87505128729943,0,0,0,0,0.85960031981627,0.515672092277442,1.61853168687678,1.5869729378161,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0,0,0,0.856952953211411,0.883474163806454,0.244981598429908,0.191690942036473,0,0,0.127687338085188,0.768032666281217,1.45074916503213,2.01272815925301,1.56274011167028,1.3959149950069,0,0.61119299110724,0.883885756421003,1.28134512719193,1.4911955666024,0.37863096666592,1.66257432234928,8.11620568364698,0.860423876981386,0,0,0,0,25.4204400438471,0,0,0,3.23939865486365,0,0,0,49.7929394325792,39.0174192831652,31.3425155909166,55.8359171826203,0,0.593768556259299,1.04091196059682,0.913396434936424,2.53677046981664,0.753613202763113,0.23517741427141,0.628332956648377,206.902187993671,0.289198713839823,0,0,0,0,206.894854952116,1.46390398505774,2.72280718857492,204.365644166873,0,0,0,0.898743836428936,0.915001205637253,0.125654352112864,0.347648640384553,0.511430914660661,0,0.162241263067758,4.17541391786297,2.61254638281195,4.54900965180614,1.68353484709179,0.390361328888111,0.459804208866946,0.180062129805349,1.05493372485001,0.884474488967262,0.512454881139399,0.374806898238915,0.258703370739016,1.72454394346274,2.08016688184601,0.879755620819744,0.219195732427575,1.66828349535359,0,0,1.59227413454795,0,0,0,0.621377317606506,0.703578179943289,0.720248245844059,0.710234206755631,1.57411385397923,1.54267112887378,0.697601834251224,0.536546802799238,1.63471479314037,1.81015834904829,1.97000956894914,1.62137619091711,2.63159977365598,2.63460138349261,1.47627060636409,0.210289948564127,0,399.806727410396,172.157318897967,10.024547775156,19.7401171081373,53.2222615260245,99.4299776393079,126.088350860041,141.718091453857,185.06633400236,184.627528245616,150.801125280162,126.13840327409,144.07846038103,160.888674149106,204.466595181461,220.648530765839,4.55202962287396,9.59687505921722,16.9061603509621,21.9943434072939,30.062635510982,41.9412202944105,63.9321390326241,100.22729047815,118.063043336714,134.749703002606,1.1858105083486,6.50695912292767,9.63139076054695,9.89393294493356,15.8230894683032,12.7823894668781,14.0044218479781,18.9879450717535,2.10775794807546,3.29473695825698,4.31304619582064,8.93138274404408,2.49630138491648,1.01031551178845,1.07638448113147,0.482443521363367,40.2761954563198,1.13694847062291,2.11854469374634,4.2436271443797,2.34690248288502,10.887906733718,20.9478403979692,31.2213836572478,31.9999342535568,22.1464689648775,23.5993057613081,30.1508499076958,30.3925568083976,35.8729665282149,0,0,0,0.551873492609465,0.160550589987792,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,1.42452482933804,0.651547837414304,2.3095817216155,0,4.61283208694465,5.13950046840077,2.45186603682668,1.18120757152309,0.922305443831782,39.5395288547378,0,1.78248689192361,0.316036757935816,0,0,3.06395645178409,2.88097750450096,2.71653235943784,1.50035924522115,1.24138163549592,0.891844088010353,0.822745103010605,0.304464949114599,19.0084083531605,18.0057260234247,1.7642271844397,1.48397627647332,0.161464426695906,0.120625849856312,0.716234064018819,2.1338316966858,141.951167438737,0.927126510052548,0.170870880797853,0,0.185194527369712,0,0,0,0,0.139951452323658,0,121.243168487919,8.06656783631895,15.0456405673868,34.9937304262636,28.0178316659388,51.5335650440979,30.8839353221239,28.6807491366916,62.5596701341831,315.22361504564,2.4853572523477,0,0.299033092087958,0,0,0.258319646955462,0,0.469428954583016,0.651021924219751,0.314578033277133,0,0.864090018773596,3.16011120628178,0.202725215290164,0.205421914329655,0,0.179026695667481,0.596044064343795,0.721172697119813,0.590758108698309,0.302899349844443,0.533447646584999,0.504130925684203,1.75424185331554,0.577271049841977,1.40252282617883,0.680191150845634,4.21773311410723,0.0897138566094757,5.87596157274275,4.44336066274038,10.1348536743638,3.11357761254351,6.00231461421384,0.501572104035363,1.12950368523413,0,0,0.171853182343688,0,0,0,2.70192721934532,0.453142408984205,0.51776031175182,0.830298780673413,3.59122386060928,3.07320490357441,2.43106717068294,9.4325923182592,12.1336715577009,13.5570503958985,11.743998262617,15.0832028508153,10.8659801058433,10.3926512954998,12.0720858487089,9.27050923951836,11.4605022804716,10.9127391015665,11.9073422820768,12.1678542242098,11.3816440073586,14.835092428919,14.5726930933053,11.3146853287187,11.1809757880383,10.9680647375768,13.6625631634389,11.104906889009,11.9306597127264,10.9756783723664,13.1534855718921,12.3581743599734,7.2948495315506,10.3212465768031,11.7220334026921,10.2307760792422,12.0850736125053,8.10207766120794,1.74867404556562,13.3341016813883,10.9584237564632,1.14772999241306,0.220591419119515,0.463735671240843 | |||
|short_description=p1@Gipc2 | |||
}} |
Revision as of 05:52, 6 August 2015
Short description: | p1@Gipc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gipc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_NM_016867, uc008rsp.1_5end |
EntrezGene: | 54120 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.12e-07 | 9 |
epithelial cell of alimentary canal | 3.12e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.77e-21 | 31 |
gastrointestinal system | 1.73e-19 | 47 |
endoderm-derived structure | 4.47e-15 | 118 |
endoderm | 4.47e-15 | 118 |
presumptive endoderm | 4.47e-15 | 118 |
digestive system | 2.60e-14 | 116 |
digestive tract | 2.60e-14 | 116 |
primitive gut | 2.60e-14 | 116 |
subdivision of digestive tract | 3.56e-13 | 114 |
mucosa | 1.17e-11 | 15 |
intestinal mucosa | 3.25e-10 | 13 |
wall of intestine | 3.25e-10 | 13 |
gastrointestinal system mucosa | 3.25e-10 | 13 |
organ component layer | 2.47e-07 | 24 |
epithelium of mucosa | 3.12e-07 | 9 |
gastrointestinal system epithelium | 3.12e-07 | 9 |
intestinal epithelium | 3.12e-07 | 9 |