FFCP PHASE1:Hg19::chr20:34301582..34301589,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9584 | |EntrezGene=9584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15923 | |HGNC=15923 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-245bp_to_ENST00000470563_5end | |association_with_transcript=-245bp_to_ENST00000470563_5end | ||
|cluster_id=chr20:34301582..34301589,- | |||
|description=CAGE_peak_2_at_RBM39_5end | |description=CAGE_peak_2_at_RBM39_5end | ||
|id=chr20:34301582..34301589,- | |id=chr20:34301582..34301589,- | ||
|ontology_enrichment_celltype=CL:0000738!1.37e-11!140;CL:0002087!4.62e-11!119;CL:0000037!8.12e-11!172;CL:0000566!8.12e-11!172;CL:0002031!2.50e-10!124;CL:0002032!2.81e-09!165;CL:0000837!2.81e-09!165;CL:0000988!4.68e-09!182;CL:0000542!2.18e-07!53;CL:0000051!2.18e-07!53;CL:0000838!2.30e-07!52 | |ontology_enrichment_celltype=CL:0000738!1.37e-11!140;CL:0002087!4.62e-11!119;CL:0000037!8.12e-11!172;CL:0000566!8.12e-11!172;CL:0002031!2.50e-10!124;CL:0002032!2.81e-09!165;CL:0000837!2.81e-09!165;CL:0000988!4.68e-09!182;CL:0000542!2.18e-07!53;CL:0000051!2.18e-07!53;CL:0000838!2.30e-07!52 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.20e-09,136;CL:0002087,7.48e-09,115;CL:0000037,7.83e-09,168;CL:0002031,3.54e-08,120;CL:0000988,4.09e-08,177;CL:0002032,2.37e-07,161;CL:0000837,2.37e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.39e-09!235;DOID:0050687!5.74e-09!143;DOID:14566!1.20e-08!239;DOID:305!1.55e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.96e-08,143;DOID:162,4.42e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@RBM39 | |short_description=p2@RBM39 | ||
}} | }} |
Latest revision as of 20:55, 15 September 2015
Short description: | p2@RBM39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RBM39_5end |
Coexpression cluster: | NA |
Association with transcript: | -245bp_to_ENST00000470563_5end |
EntrezGene: | RBM39 |
HGNC: | 15923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.20e-09 | 136 |
nongranular leukocyte | 7.48e-09 | 115 |
hematopoietic stem cell | 7.83e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 3.54e-08 | 120 |
hematopoietic cell | 4.09e-08 | 177 |
hematopoietic oligopotent progenitor cell | 2.37e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.96e-08 | 143 |
cancer | 4.42e-07 | 235 |