FFCP PHASE1:Hg19::chr12:91502618..91502636,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4060 | |EntrezGene=4060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6724 | |HGNC=6724 | ||
|TSSclassifier=strong | |||
|UniProt=P51884 | |UniProt=P51884 | ||
|association_with_transcript=119bp_to_AB590375,BT006707,CU675507,CU690252,DQ892554,DQ895765_5end | |association_with_transcript=119bp_to_AB590375,BT006707,CU675507,CU690252,DQ892554,DQ895765_5end | ||
|cluster_id=chr12:91502618..91502636,- | |||
|coexpression_cluster_id=C1371 | |||
|description=CAGE_peak_7_at_LUM_5end | |description=CAGE_peak_7_at_LUM_5end | ||
|id=chr12:91502618..91502636,- | |id=chr12:91502618..91502636,- | ||
|ontology_enrichment_celltype=CL:0000057!4.19e-10!75;CL:0002620!5.12e-10!23;CL:0000055!1.71e-07!180;CL:0000499!8.33e-07!27 | |ontology_enrichment_celltype=CL:0000057!4.19e-10!75;CL:0002620!5.12e-10!23;CL:0000055!1.71e-07!180;CL:0000499!8.33e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.72e-13;3!CL:0000388;1.72e-13;3!CL:0002504;4.54e-12;3!CL:1000279;4.54e-12;3!CL:1000280;4.54e-12;3!CL:0000153;1.22e-10;9!CL:0000447;1.22e-10;9!CL:0002617;2.22e-08;2!CL:0000499;6.71e-08;28!CL:0000136;2.33e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.73e-13,3;CL:0000388,1.73e-13,3;CL:0002504,6.20e-12,3;CL:1000279,6.20e-12,3;CL:1000280,6.20e-12,3;CL:0000153,1.68e-10,9;CL:0000447,1.68e-10,9;CL:0000136,7.60e-09,15;CL:0002617,3.37e-08,2;CL:0000499,7.86e-08,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!5.12e-09!9;UBERON:0003688!1.56e-07!6;UBERON:0002358!1.56e-07!6;UBERON:0003684!1.56e-07!6;UBERON:0001178!1.56e-07!6;UBERON:0004457!2.59e-07!12;UBERON:0000042!2.59e-07!12;UBERON:0002199!2.99e-07!45;UBERON:0002416!2.99e-07!45;UBERON:0002097!3.01e-07!40 | |ontology_enrichment_uberon=UBERON:0001737!5.12e-09!9;UBERON:0003688!1.56e-07!6;UBERON:0002358!1.56e-07!6;UBERON:0003684!1.56e-07!6;UBERON:0001178!1.56e-07!6;UBERON:0004457!2.59e-07!12;UBERON:0000042!2.59e-07!12;UBERON:0002199!2.99e-07!45;UBERON:0002416!2.99e-07!45;UBERON:0002097!3.01e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.22e-15;9!UBERON:0000042;4.22e-15;9!UBERON:0007846;1.72e-13;3!UBERON:0000043;1.72e-13;3!UBERON:0007845;1.72e-13;3!UBERON:0003688;6.68e-11;6!UBERON:0002358;6.68e-11;6!UBERON:0003684;6.68e-11;6!UBERON:0001178;6.68e-11;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.73e-13,3;UBERON:0000043,1.73e-13,3;UBERON:0007845,1.73e-13,3;UBERON:0004457,5.10e-11,12;UBERON:0000042,5.10e-11,12;UBERON:0003688,9.48e-11,6;UBERON:0002358,9.48e-11,6;UBERON:0003684,9.48e-11,6;UBERON:0001178,9.48e-11,6;UBERON:0004923,7.09e-07,66 | |||
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| ||
|short_description=p7@LUM | |short_description=p7@LUM | ||
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Latest revision as of 21:03, 15 September 2015
Short description: | p7@LUM |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LUM_5end |
Coexpression cluster: | C1371_tenocyte_Chondrocyte_placenta_Fibroblast_skin_mesenchymal_chorionic |
Association with transcript: | 119bp_to_AB590375, BT006707, CU675507, CU690252, DQ892554, DQ895765_5end |
EntrezGene: | LUM |
HGNC: | 6724 |
UniProt: | P51884 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.73e-13 | 3 |
tendon cell | 1.73e-13 | 3 |
enteric smooth muscle cell | 6.20e-12 | 3 |
smooth muscle cell of large intestine | 6.20e-12 | 3 |
smooth muscle cell of colon | 6.20e-12 | 3 |
GAG secreting cell | 1.68e-10 | 9 |
carbohydrate secreting cell | 1.68e-10 | 9 |
fat cell | 7.60e-09 | 15 |
adipocyte of breast | 3.37e-08 | 2 |
stromal cell | 7.86e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.73e-13 | 3 |
tendon | 1.73e-13 | 3 |
regular connective tissue | 1.73e-13 | 3 |
cavity lining | 5.10e-11 | 12 |
serous membrane | 5.10e-11 | 12 |
omentum | 9.48e-11 | 6 |
peritoneum | 9.48e-11 | 6 |
abdominal cavity | 9.48e-11 | 6 |
visceral peritoneum | 9.48e-11 | 6 |
organ component layer | 7.09e-07 | 66 |