FFCP PHASE1:Hg19::chr9:131674986..131674995,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56262 | |EntrezGene=56262 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19027 | |HGNC=19027 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000492784_5end | |association_with_transcript=-27bp_to_ENST00000492784_5end | ||
|cluster_id=chr9:131674986..131674995,+ | |||
|description=CAGE_peak_33_at_LRRC8A_5end | |description=CAGE_peak_33_at_LRRC8A_5end | ||
|id=chr9:131674986..131674995,+ | |id=chr9:131674986..131674995,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.29e-12!254;CL:0002139!7.72e-12!24;CL:0000071!1.88e-11!18;CL:0002546!1.88e-11!18;CL:0002368!1.92e-11!13;CL:0000076!1.44e-09!62;CL:0002321!2.72e-09!248;CL:0002076!7.13e-09!43;CL:0000220!7.14e-09!246;CL:0000115!3.22e-07!35;CL:0002618!3.74e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.29e-12!254;CL:0002139!7.72e-12!24;CL:0000071!1.88e-11!18;CL:0002546!1.88e-11!18;CL:0002368!1.92e-11!13;CL:0000076!1.44e-09!62;CL:0002321!2.72e-09!248;CL:0002076!7.13e-09!43;CL:0000220!7.14e-09!246;CL:0000115!3.22e-07!35;CL:0002618!3.74e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.48e-35;13!CL:0000197;8.62e-20;6!CL:0000098;8.62e-20;6!CL:0002167;8.62e-20;6!CL:0002202;1.49e-13;9!CL:0002632;1.49e-13;9!CL:0002328;9.43e-11;3!CL:0000307;9.43e-11;3!CL:0002076;3.68e-10;42!CL:0002537;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.98e-35,13;CL:0000197,7.13e-20,6;CL:0000098,7.13e-20,6;CL:0002167,7.13e-20,6;CL:0002202,1.49e-13,9;CL:0002632,1.49e-13,9;CL:0002076,2.75e-11,42;CL:0002328,7.42e-11,3;CL:0000068,1.20e-10,3;CL:0000069,1.20e-10,3;CL:0000307,1.20e-10,3;CL:0000377,1.20e-10,3;CL:0000223,2.67e-08,58;CL:0002537,6.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;9.43e-11;3!CL:0000223;4.05e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.88e-11!18;UBERON:0004638!1.88e-11!18;UBERON:0004852!1.88e-11!18;UBERON:0000487!5.90e-09!22;UBERON:0006914!1.28e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;9.43e-11;3!UBERON:0002031;9.43e-11;3!UBERON:0000065;1.63e-09;44!UBERON:0007196;1.59e-08;15!UBERON:0001558;1.59e-08;15!UBERON:0002185;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,7.42e-11,3;UBERON:0002031,7.42e-11,3;UBERON:0000065,6.97e-09,54;UBERON:0007196,1.59e-08,15;UBERON:0001558,1.59e-08,15;UBERON:0002185,5.08e-07,5 | |||
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| ||
|short_description=p33@LRRC8A | |short_description=p33@LRRC8A | ||
}} | }} |
Latest revision as of 21:12, 15 September 2015
Short description: | p33@LRRC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_LRRC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000492784_5end |
EntrezGene: | LRRC8A |
HGNC: | 19027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.98e-35 | 13 |
receptor cell | 7.13e-20 | 6 |
sensory epithelial cell | 7.13e-20 | 6 |
olfactory epithelial cell | 7.13e-20 | 6 |
epithelial cell of tracheobronchial tree | 1.49e-13 | 9 |
epithelial cell of lower respiratory tract | 1.49e-13 | 9 |
endo-epithelial cell | 2.75e-11 | 42 |
bronchial epithelial cell | 7.42e-11 | 3 |
duct epithelial cell | 1.20e-10 | 3 |
branched duct epithelial cell | 1.20e-10 | 3 |
tracheal epithelial cell | 1.20e-10 | 3 |
tracheoblast | 1.20e-10 | 3 |
endodermal cell | 2.67e-08 | 58 |
amnion mesenchymal stem cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 7.42e-11 | 3 |
epithelium of bronchus | 7.42e-11 | 3 |
respiratory tract | 6.97e-09 | 54 |
tracheobronchial tree | 1.59e-08 | 15 |
lower respiratory tract | 1.59e-08 | 15 |
bronchus | 5.08e-07 | 5 |