FFCP PHASE1:Hg19::chr3:149193579..149193585,+: Difference between revisions
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|id=chr3:149193579..149193585,+
|short_description=p9@TM4SF4
|description=CAGE_peak_9_at_TM4SF4_5end
|association_with_transcript=8bp_to_ENST00000463068_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7104 | |EntrezGene=7104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11856 | |HGNC=11856 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000463068_5end | |||
|cluster_id=chr3:149193579..149193585,+ | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_9_at_TM4SF4_5end | |||
|id=chr3:149193579..149193585,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.38e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;3.61e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.61e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0009497!4.89e-10!25;UBERON:0000015!4.89e-10!25;UBERON:0002423!4.89e-10!25;UBERON:0006235!4.89e-10!25;UBERON:0004161!4.89e-10!25;UBERON:0002107!9.54e-09!19;UBERON:0006925!9.54e-09!19;UBERON:0008836!9.54e-09!19;UBERON:0008835!1.42e-07!22;UBERON:0003894!1.42e-07!22;UBERON:0009854!2.99e-07!23 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p9@TM4SF4 | |||
}} | }} |
Latest revision as of 21:36, 15 September 2015
Short description: | p9@TM4SF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TM4SF4_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 8bp_to_ENST00000463068_5end |
EntrezGene: | TM4SF4 |
HGNC: | 11856 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.61e-34 | 2 |