FFCP PHASE1:Hg19::chr2:101591314..101591333,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4862 | |EntrezGene=4862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7895 | |HGNC=7895 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000450763_5end | |association_with_transcript=0bp_to_ENST00000450763_5end | ||
|cluster_id=chr2:101591314..101591333,+ | |||
|description=CAGE_peak_2_at_NPAS2_5end | |description=CAGE_peak_2_at_NPAS2_5end | ||
|id=chr2:101591314..101591333,+ | |id=chr2:101591314..101591333,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002559;7.09e-08;5 | |ontology_enrichment_celltype_v019=CL:0002559;7.09e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002559,3.30e-08,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.51e-08!14 | |ontology_enrichment_disease=DOID:2394!1.51e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.05e-13;14!DOID:120;6.01e-09;27!DOID:193;4.70e-08;29 | |ontology_enrichment_disease_v019=DOID:2394;4.05e-13;14!DOID:120;6.01e-09;27!DOID:193;4.70e-08;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.24e-12,14;DOID:120,1.03e-08,27;DOID:193,7.65e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0000481!9.33e-14!347;UBERON:0000477!2.43e-12!286;UBERON:0000119!3.04e-12!312;UBERON:0000483!5.84e-12!309;UBERON:0000475!6.32e-12!365;UBERON:0004111!2.52e-10!241;UBERON:0000468!6.28e-10!659;UBERON:0000922!1.10e-09!612;UBERON:0002050!1.16e-09!605;UBERON:0005423!1.16e-09!605;UBERON:0000923!2.32e-09!604;UBERON:0005291!2.32e-09!604;UBERON:0006598!2.32e-09!604;UBERON:0002532!2.32e-09!604;UBERON:0000467!2.79e-09!625;UBERON:0000480!4.14e-09!626;UBERON:0000025!4.98e-08!194;UBERON:0002020!2.38e-07!34;UBERON:0003528!2.38e-07!34;UBERON:0002780!4.50e-07!41;UBERON:0001890!4.50e-07!41;UBERON:0006240!4.50e-07!41;UBERON:0002619!5.58e-07!22;UBERON:0001869!5.62e-07!32;UBERON:0002791!7.03e-07!33;UBERON:0001893!9.79e-07!34 | |ontology_enrichment_uberon=UBERON:0000481!9.33e-14!347;UBERON:0000477!2.43e-12!286;UBERON:0000119!3.04e-12!312;UBERON:0000483!5.84e-12!309;UBERON:0000475!6.32e-12!365;UBERON:0004111!2.52e-10!241;UBERON:0000468!6.28e-10!659;UBERON:0000922!1.10e-09!612;UBERON:0002050!1.16e-09!605;UBERON:0005423!1.16e-09!605;UBERON:0000923!2.32e-09!604;UBERON:0005291!2.32e-09!604;UBERON:0006598!2.32e-09!604;UBERON:0002532!2.32e-09!604;UBERON:0000467!2.79e-09!625;UBERON:0000480!4.14e-09!626;UBERON:0000025!4.98e-08!194;UBERON:0002020!2.38e-07!34;UBERON:0003528!2.38e-07!34;UBERON:0002780!4.50e-07!41;UBERON:0001890!4.50e-07!41;UBERON:0006240!4.50e-07!41;UBERON:0002619!5.58e-07!22;UBERON:0001869!5.62e-07!32;UBERON:0002791!7.03e-07!33;UBERON:0001893!9.79e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;5.97e-08;15!UBERON:0007376;5.97e-08;15!UBERON:0002073;7.09e-08;5!UBERON:0002118;4.78e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001003;5.97e-08;15!UBERON:0007376;5.97e-08;15!UBERON:0002073;7.09e-08;5!UBERON:0002118;4.78e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,3.22e-08,15;UBERON:0007376,3.22e-08,15;UBERON:0007383,3.22e-08,15;UBERON:0002073,3.30e-08,5;UBERON:0005086,3.30e-08,5;UBERON:0002118,9.01e-07,5 | |||
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| ||
|short_description=p2@NPAS2 | |short_description=p2@NPAS2 | ||
}} | }} |
Latest revision as of 23:24, 15 September 2015
Short description: | p2@NPAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NPAS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000450763_5end |
EntrezGene: | NPAS2 |
HGNC: | 7895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 3.30e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 3.22e-08 | 15 |
outer epithelium | 3.22e-08 | 15 |
enveloping layer of ectoderm | 3.22e-08 | 15 |
hair follicle | 3.30e-08 | 5 |
hair follicle placode | 3.30e-08 | 5 |
right ovary | 9.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.24e-12 | 14 |
female reproductive organ cancer | 1.03e-08 | 27 |
reproductive organ cancer | 7.65e-08 | 29 |