FFCP PHASE1:Hg19::chr5:148650940..148650958,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=134265 | |EntrezGene=134265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26714 | |HGNC=26714 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TED9 | |UniProt=Q8TED9 | ||
|association_with_transcript=-442bp_to_NM_001146337,NM_152406,uc003lqg.3,uc003lqh.2,uc010jgy.2_5end | |association_with_transcript=-442bp_to_NM_001146337,NM_152406,uc003lqg.3,uc003lqh.2,uc010jgy.2_5end | ||
|cluster_id=chr5:148650940..148650958,+ | |||
|coexpression_cluster_id=C83 | |coexpression_cluster_id=C83 | ||
|description=CAGE_peak_3_at_AFAP1L1_5end | |description=CAGE_peak_3_at_AFAP1L1_5end | ||
|id=chr5:148650940..148650958,+ | |id=chr5:148650940..148650958,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.22e-12!254;CL:0000223!6.07e-11!59;CL:0002076!2.94e-09!43;CL:0002251!7.49e-09!21;CL:0002621!8.01e-08!3;CL:0002541!1.64e-07!3 | |ontology_enrichment_celltype=CL:0000066!2.22e-12!254;CL:0000223!6.07e-11!59;CL:0002076!2.94e-09!43;CL:0002251!7.49e-09!21;CL:0002621!8.01e-08!3;CL:0002541!1.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.56e-37;7!CL:0000586;5.56e-37;7!CL:0002541;9.43e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.12e-37,7;CL:0000586,7.12e-37,7;CL:0002541,1.20e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;2.44e-12;22!DOID:2994;2.44e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.64e-12,22;DOID:2994,2.64e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.22e-13!169;UBERON:0000925!2.22e-13!169;UBERON:0006595!2.22e-13!169;UBERON:0001007!3.37e-10!155;UBERON:0001555!3.37e-10!155;UBERON:0007026!3.37e-10!155;UBERON:0001949!8.01e-08!3;UBERON:0001004!1.28e-07!72;UBERON:0000476!1.64e-07!3;UBERON:0000920!1.64e-07!3 | |ontology_enrichment_uberon=UBERON:0004119!2.22e-13!169;UBERON:0000925!2.22e-13!169;UBERON:0006595!2.22e-13!169;UBERON:0001007!3.37e-10!155;UBERON:0001555!3.37e-10!155;UBERON:0007026!3.37e-10!155;UBERON:0001949!8.01e-08!3;UBERON:0001004!1.28e-07!72;UBERON:0000476!1.64e-07!3;UBERON:0000920!1.64e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.43e-11;3!UBERON:0000920;9.43e-11;3!UBERON:0002107;6.38e-07;19!UBERON:0006925;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.20e-10,3;UBERON:0002107,5.66e-07,19;UBERON:0006925,5.66e-07,19;UBERON:0008836,5.66e-07,19 | |||
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| ||
|short_description=p3@AFAP1L1 | |short_description=p3@AFAP1L1 | ||
}} | }} |
Latest revision as of 01:09, 16 September 2015
Short description: | p3@AFAP1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AFAP1L1_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | -442bp_to_NM_001146337, NM_152406, uc003lqg.3, uc003lqh.2, uc010jgy.2_5end |
EntrezGene: | AFAP1L1 |
HGNC: | 26714 |
UniProt: | Q8TED9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.12e-37 | 7 |
germ cell | 7.12e-37 | 7 |
chorionic membrane mesenchymal stem cell | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.20e-10 | 3 |
liver | 5.66e-07 | 19 |
digestive gland | 5.66e-07 | 19 |
liver bud | 5.66e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.64e-12 | 22 |
germ cell cancer | 2.64e-12 | 22 |