FFCP PHASE1:Hg19::chr3:151112567..151112587,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116931 | |EntrezGene=116931 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16050 | |HGNC=16050 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=112bp_to_ENST00000488092_5end | |association_with_transcript=112bp_to_ENST00000488092_5end | ||
|cluster_id=chr3:151112567..151112587,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_9_at_MED12L_5end | |description=CAGE_peak_9_at_MED12L_5end | ||
|id=chr3:151112567..151112587,+ | |id=chr3:151112567..151112587,+ | ||
|ontology_enrichment_celltype=CL:0002322!4.87e-31!5;CL:0000039!1.35e-14!7;CL:0000586!1.35e-14!7;CL:0000540!8.72e-10!6;CL:0000031!8.72e-10!6;CL:0000404!8.72e-10!6;CL:0000047!1.89e-07!8 | |ontology_enrichment_celltype=CL:0002322!4.87e-31!5;CL:0000039!1.35e-14!7;CL:0000586!1.35e-14!7;CL:0000540!8.72e-10!6;CL:0000031!8.72e-10!6;CL:0000404!8.72e-10!6;CL:0000047!1.89e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.99e-11;7!CL:0000586;8.99e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.99e-11,7;CL:0000586,8.99e-11,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.13e-08;10!UBERON:0005564;6.13e-08;10 | |||
|ontology_enrichment_disease=DOID:1749!2.18e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.48e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.48e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0001872!1.67e-11!5;UBERON:0003135!1.88e-09!11;UBERON:0002619!6.65e-09!22;UBERON:0001896!1.18e-08!3;UBERON:0005290!1.18e-08!3;UBERON:0010096!1.18e-08!3;UBERON:0001017!5.92e-08!82;UBERON:0000956!8.19e-08!25;UBERON:0000203!8.19e-08!25;UBERON:0000989!9.71e-08!1;UBERON:0008811!9.71e-08!1;UBERON:0006258!9.71e-08!1;UBERON:0005876!9.71e-08!1;UBERON:0004874!9.71e-08!1;UBERON:0000473!1.05e-07!8;UBERON:0007029!1.10e-07!1;UBERON:0005743!1.71e-07!86;UBERON:0002022!3.20e-07!1;UBERON:0002581!4.61e-07!1;UBERON:0001950!5.30e-07!20;UBERON:0003101!6.71e-07!22;UBERON:0000079!6.71e-07!22 | |ontology_enrichment_uberon=UBERON:0001872!1.67e-11!5;UBERON:0003135!1.88e-09!11;UBERON:0002619!6.65e-09!22;UBERON:0001896!1.18e-08!3;UBERON:0005290!1.18e-08!3;UBERON:0010096!1.18e-08!3;UBERON:0001017!5.92e-08!82;UBERON:0000956!8.19e-08!25;UBERON:0000203!8.19e-08!25;UBERON:0000989!9.71e-08!1;UBERON:0008811!9.71e-08!1;UBERON:0006258!9.71e-08!1;UBERON:0005876!9.71e-08!1;UBERON:0004874!9.71e-08!1;UBERON:0000473!1.05e-07!8;UBERON:0007029!1.10e-07!1;UBERON:0005743!1.71e-07!86;UBERON:0002022!3.20e-07!1;UBERON:0002581!4.61e-07!1;UBERON:0001950!5.30e-07!20;UBERON:0003101!6.71e-07!22;UBERON:0000079!6.71e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.35e-09;8!UBERON:0003135;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.35e-09,8;UBERON:0003135,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.397589304964456,0.580969714347592,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.7497772317416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.07955318967927,0.26721740526556,0.643264296743914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.397589304964456,0.580969714347592,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.7497772317416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.07955318967927,0.26721740526556,0.643264296743914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@MED12L | |short_description=p9@MED12L | ||
}} | }} |
Latest revision as of 01:17, 16 September 2015
Short description: | p9@MED12L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MED12L_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 112bp_to_ENST00000488092_5end |
EntrezGene: | MED12L |
HGNC: | 16050 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.99e-11 | 7 |
germ cell | 8.99e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.35e-09 | 8 |
male reproductive organ | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.48e-20 | 14 |