FFCP PHASE1:Hg19::chr7:128001737..128001749,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401399 | |EntrezGene=401399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37280 | |HGNC=37280 | ||
|TSSclassifier=strong | |||
|UniProt=C9JH25,C9JWH6 | |UniProt=C9JH25,C9JWH6 | ||
|association_with_transcript=0bp_to_ENST00000435512,ENST00000446477,ENST00000495931,ENST00000535159,NM_001114726,NM_001174164,uc010llh.2_5end | |association_with_transcript=0bp_to_ENST00000435512,ENST00000446477,ENST00000495931,ENST00000535159,NM_001114726,NM_001174164,uc010llh.2_5end | ||
|cluster_id=chr7:128001737..128001749,- | |||
|coexpression_cluster_id=C4650 | |||
|description=CAGE_peak_2_at_PRRT4_5end | |description=CAGE_peak_2_at_PRRT4_5end | ||
|id=chr7:128001737..128001749,- | |id=chr7:128001737..128001749,- | ||
|ontology_enrichment_celltype=CL:0000136!5.28e-10!15 | |ontology_enrichment_celltype=CL:0000136!5.28e-10!15 | ||
|ontology_enrichment_celltype_v019=CL:0000333;8.41e-20;5!CL:0000136;8.59e-08;13!CL:0002321;5.87e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.29e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.29e-11!10 | |ontology_enrichment_disease=DOID:171!2.29e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:171;8.46e-38;10!DOID:3095;4.99e-17;22!DOID:2994;4.99e-17;22!DOID:169;1.31e-16;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.78e-38,10;DOID:3095,3.87e-17,22;DOID:2994,3.87e-17,22;DOID:169,1.06e-16,6 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.12e-17!90;UBERON:0001049!3.21e-17!57;UBERON:0005068!3.21e-17!57;UBERON:0006241!3.21e-17!57;UBERON:0007135!3.21e-17!57;UBERON:0007023!2.14e-15!115;UBERON:0002020!2.97e-14!34;UBERON:0003528!2.97e-14!34;UBERON:0001893!3.94e-14!34;UBERON:0003075!4.18e-14!86;UBERON:0007284!4.18e-14!86;UBERON:0001869!6.57e-14!32;UBERON:0002616!1.09e-13!59;UBERON:0000073!4.16e-13!94;UBERON:0001016!4.16e-13!94;UBERON:0002791!4.57e-13!33;UBERON:0002780!5.94e-12!41;UBERON:0001890!5.94e-12!41;UBERON:0006240!5.94e-12!41;UBERON:0002619!7.79e-12!22;UBERON:0001950!1.27e-11!20;UBERON:0003080!1.55e-11!42;UBERON:0000955!2.49e-11!69;UBERON:0006238!2.49e-11!69;UBERON:0005743!5.05e-11!86;UBERON:0001017!5.48e-11!82;UBERON:0000924!1.66e-10!173;UBERON:0006601!1.66e-10!173;UBERON:0000956!5.13e-10!25;UBERON:0000203!5.13e-10!25;UBERON:0003056!7.61e-09!61;UBERON:0004121!2.59e-08!169;UBERON:0003076!3.52e-07!15;UBERON:0003057!3.52e-07!15;UBERON:0000013!1.00e-06!5;UBERON:0002410!1.00e-06!5 | |ontology_enrichment_uberon=UBERON:0002346!1.12e-17!90;UBERON:0001049!3.21e-17!57;UBERON:0005068!3.21e-17!57;UBERON:0006241!3.21e-17!57;UBERON:0007135!3.21e-17!57;UBERON:0007023!2.14e-15!115;UBERON:0002020!2.97e-14!34;UBERON:0003528!2.97e-14!34;UBERON:0001893!3.94e-14!34;UBERON:0003075!4.18e-14!86;UBERON:0007284!4.18e-14!86;UBERON:0001869!6.57e-14!32;UBERON:0002616!1.09e-13!59;UBERON:0000073!4.16e-13!94;UBERON:0001016!4.16e-13!94;UBERON:0002791!4.57e-13!33;UBERON:0002780!5.94e-12!41;UBERON:0001890!5.94e-12!41;UBERON:0006240!5.94e-12!41;UBERON:0002619!7.79e-12!22;UBERON:0001950!1.27e-11!20;UBERON:0003080!1.55e-11!42;UBERON:0000955!2.49e-11!69;UBERON:0006238!2.49e-11!69;UBERON:0005743!5.05e-11!86;UBERON:0001017!5.48e-11!82;UBERON:0000924!1.66e-10!173;UBERON:0006601!1.66e-10!173;UBERON:0000956!5.13e-10!25;UBERON:0000203!5.13e-10!25;UBERON:0003056!7.61e-09!61;UBERON:0004121!2.59e-08!169;UBERON:0003076!3.52e-07!15;UBERON:0003057!3.52e-07!15;UBERON:0000013!1.00e-06!5;UBERON:0002410!1.00e-06!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.77e-24;4!UBERON:0000923;1.77e-24;4!UBERON:0010316;1.77e-24;4!UBERON:0005291;1.77e-24;4!UBERON:0000013;8.41e-20;5!UBERON:0002410;8.41e-20;5!UBERON:0002050;1.02e-19;5!UBERON:0005423;1.02e-19;5!UBERON:0007029;1.13e-11;1!UBERON:0000010;2.88e-11;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.52e-20,5;UBERON:0002410,6.52e-20,5;UBERON:0007029,1.07e-11,1;UBERON:0000010,2.51e-11,8 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.623224249527161,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0,0,1.09675927041116,0,0,0,0,0,2.06103206853459,0,0,0,1.56310476321632,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0.296964680832639,0,0,0.422008249231538,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0.260427761085233,0,0,0,0,0,0,1.16641845353302,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.443175571691151,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.26446520348538,0,2.11444506695002,0,0.157204305099666,0,0,0,0,0,1.08803560673895,0.5013797880454,0.612691153526923,2.62298104567844,0,0.886068179966986,0,0.250381861413,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0.895260599125562,0,3.61711666268562,8.84598069355313,1.69732529954025,2.55089904122019,8.42763196961215,1.67593475391973,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.317079050969534,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.428859265059938,0,0,6.60661434749802,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,1.39265542612958,0,0,0,0,0,0,0,0,0,0.196308467114945,0,2.5359343655004,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0.407948941145488,0.872701380680755,0.5290268405154,0,0,0,0,0,0.126698501011437,0.509944148709909,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.813792356631477,0,0.402547587182052,0 | |phase1_expression=0.181678379270557,1.49870366723688,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.623224249527161,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0,0,1.09675927041116,0,0,0,0,0,2.06103206853459,0,0,0,1.56310476321632,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0.296964680832639,0,0,0.422008249231538,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0.260427761085233,0,0,0,0,0,0,1.16641845353302,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.443175571691151,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.26446520348538,0,2.11444506695002,0,0.157204305099666,0,0,0,0,0,1.08803560673895,0.5013797880454,0.612691153526923,2.62298104567844,0,0.886068179966986,0,0.250381861413,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0.895260599125562,0,3.61711666268562,8.84598069355313,1.69732529954025,2.55089904122019,8.42763196961215,1.67593475391973,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.317079050969534,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.428859265059938,0,0,6.60661434749802,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,1.39265542612958,0,0,0,0,0,0,0,0,0,0.196308467114945,0,2.5359343655004,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0.407948941145488,0.872701380680755,0.5290268405154,0,0,0,0,0,0.126698501011437,0.509944148709909,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.813792356631477,0,0.402547587182052,0 | ||
|short_description=p2@PRRT4 | |short_description=p2@PRRT4 | ||
}} | }} |
Latest revision as of 03:18, 16 September 2015
Short description: | p2@PRRT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRRT4_5end |
Coexpression cluster: | C4650_neuroblastoma_neuroectodermal_mature_rhabdomyosarcoma_neuroepithelioma_small_acute |
Association with transcript: | 0bp_to_ENST00000435512, ENST00000446477, ENST00000495931, ENST00000535159, NM_001114726, NM_001174164, uc010llh.2_5end |
EntrezGene: | PRRT4 |
HGNC: | 37280 |
UniProt: | C9JH25C9JWH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.52e-20 | 5 |
autonomic nervous system | 6.52e-20 | 5 |
surface | 1.07e-11 | 1 |
peripheral nervous system | 2.51e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.78e-38 | 10 |
germ cell and embryonal cancer | 3.87e-17 | 22 |
germ cell cancer | 3.87e-17 | 22 |
neuroendocrine tumor | 1.06e-16 | 6 |