FFCP PHASE1:Hg19::chr12:10875658..10875708,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-148bp_to_ENST00000540447_5end | |||
|cluster_id=chr12:10875658..10875708,- | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_2_at_CSDA_5end | |||
|id=chr12:10875658..10875708,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.17e-10!448;UBERON:0004120!5.17e-10!448;UBERON:0006603!5.17e-10!448;UBERON:0000468!8.73e-08!659;UBERON:0001009!2.16e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,5.75e-09,315;UBERON:0004120,5.75e-09,315;UBERON:0006603,5.75e-09,315;UBERON:0001009,5.13e-08,112;UBERON:0003081,6.52e-08,203;UBERON:0007023,5.53e-07,114;UBERON:0004535,6.08e-07,109 | |||
|phase1_expression=3.27021082687002,4.49611100171065,3.38290569830331,3.00219895059391,2.23480547213644,1.74467704820074,7.59899634504932,4.42203911398782,3.65659879479774,0.737201809504527,4.88460817580699,0.218441372130172,0.791300934685361,0.618831764800233,2.98257638155124,0,1.20538905604795,0.730310090387373,0.975865597581014,1.35433163884467,4.89601658986207,0.940364164434263,0.572471974262113,0.547497700291537,1.12988375635323,0.534893840235659,0.821005894499457,0.708397031823113,1.96682138424452,1.15148819429164,1.39334510984468,2.75826367343678,6.024118375565,4.06729411183466,0.0774672005803016,0.995184627411951,3.81680571135301,0,2.00544447470142,1.08505435357926,0.447830948479849,0.32389366601898,0.257575567634187,2.61716829803216,3.02300754951048,2.42584061187816,4.64858073811369,1.6446715520873,2.47765096716083,3.45230870786581,5.12321413058201,1.89185783910868,2.41321976515633,1.93645405075148,4.06279459783025,4.70605848856512,4.36649840092553,2.24723484445085,6.73384563215986,1.92557416245656,2.55734850319616,1.9791078011203,5.98390972864896,2.13112375266347,3.19230162491442,1.70215567407342,3.11411124497787,6.28121663141858,2.60741459210101,4.77815458351257,3.63239701580021,2.57794345191295,1.58231193720442,1.05627643155971,0.850417199860174,0.838634582033504,0.786300418025466,0.600707571366025,0.803627933485401,0.855038231223746,0.39783335439818,0,3.51992488922645,1.09227722252426,0.889509253863555,0.853460445133014,0.800791974072025,0.574752439954483,1.32208974556972,1.90810750907073,4.55370375287559,5.87237189370939,3.44045905312706,9.25199300053181,2.24203425192614,0.790152254325231,0.196709770113833,2.35806457649499,0.411202997999018,0.334372990781356,0.651844533267181,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.128091319725675,0.520237390239513,0,0,0.289803085735052,0.593146252648242,0.267540828089713,1.04535523804977,0,0.383220493601921,0.34362744548263,0,0.95569624297229,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0,6.65302252641617,6.41856469880418,7.53086900190555,4.87613732627923,0,1.2786256184353,6.14446559053763,3.00802746381534,2.17269778441236,0,3.40644409211845,0.283604451492204,1.55210578223795,1.14185221401064,5.23916301990851,1.09288586487763,1.48313777113772,0,0.522389211897802,0.531831842075461,0,0,0.371457501329565,4.77029777680092,1.72046919021225,2.42998351125316,2.26123176769604,1.67799774483962,9.35401342596229,2.71693456497854,1.55050055501597,0.35576626268671,0.33472061276467,2.81980521976403,0,1.70843440283719,1.47065232138347,5.67099363517232,1.3394959242612,2.2452937262617,1.0135033243499,3.06633274931766,1.89853131913626,3.66403487860815,0,0,0.872188104285069,2.48485975847659,1.2663051166458,0.397227542439656,1.72101972449288,1.06400514659507,1.12135520028461,1.06748995729705,0.98667019366864,0.622422070799533,3.50247747381189,1.14423332179421,1.81628913173918,1.72852777344,1.87457145467037,2.80944069147288,1.1409436430889,2.83952493048422,0.469737994575059,1.29498355494505,1.12360645361799,0.408308342509787,0.982674538494144,0.309977343527296,2.37600571456411,4.69807165629258,4.55080680969013,3.59309070908119,0.505008341862199,0.875829639103749,0.831192346452549,1.75591048352335,1.5324389789951,2.70428506031874,1.24775401476023,1.25572744982203,0.640672166455702,0.423863802319124,0.300091096084402,1.33968288009971,0.515281080091258,1.48893485065272,0.843881661206331,0.974370051611986,1.7670364197088,1.01254888506529,1.61646056818812,0.355009592516614,2.41805035746337,0.847802961552438,1.54608682530637,1.63647672354501,2.00763216772303,1.09776335516636,1.06023814657188,1.39432731443422,0.932949495138334,1.26160425437814,0.72995471815166,3.12899064659632,3.21620469096443,4.14404764057442,1.85747171212792,1.44375896333917,1.41968160047813,1.51726221070292,0.723033089650446,1.65440959098591,1.08939722046203,1.18635309555548,2.56179485504312,1.17732879075208,2.30848294167834,4.42893272774789,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0,0,0.368965315629341,0.514703430895577,1.97550513735526,2.24803506515239,0.804231779293047,1.574003567695,2.28065813717227,2.07986957055916,2.88662684050547,0.115930404975077,1.40890433082986,1.87676382089396,3.24089858803628,2.09279567458058,0.790204397959275,0.858486162094873,0.492434012174795,0.468008530278475,0.891786973732369,0.93733833986777,0.503946384596579,1.13420077793909,1.16426079513703,0.581267877027924,2.30029607499127,0,0.176096868026452,3.52457796419313,3.60299883542404,5.30218220390796,0.380987365753014,1.90994212779139,1.17217447210047,0,0.616964956219941,0.901029173531752,0.285826432630578,1.00917975910825,4.3596006883328,1.68678057388185,1.03417372606222,0,1.690605505112,0.797814349754612,2.08014873822732,0.514414748524284,1.41849132023278,0.799266537048298,0.57191197463259,1.08524321078289,1.64648067356154,0.65147236858747,0.355391948742546,1.58390374586686,0.904318131178758,1.74306691720059,0.799783929456456,1.2162378064119,0.502257091432126,0,1.198124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| |||
|short_description=p2@CSDA | |||
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Latest revision as of 04:40, 16 September 2015
Short description: | p2@CSDA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSDA_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | -148bp_to_ENST00000540447_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesoderm | 5.75e-09 | 315 |
mesoderm-derived structure | 5.75e-09 | 315 |
presumptive mesoderm | 5.75e-09 | 315 |
circulatory system | 5.13e-08 | 112 |
lateral plate mesoderm | 6.52e-08 | 203 |
adult organism | 5.53e-07 | 114 |
cardiovascular system | 6.08e-07 | 109 |