FFCP PHASE1:Hg19::chr3:154797928..154797939,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:154797928..154797939,+ to FFCP PHASE1:Hg19::chr3:154797928..154797939,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4311 | |EntrezGene=4311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |HGNC=7154 | ||
|TSSclassifier=strong | |||
|UniProt=P08473 | |UniProt=P08473 | ||
|association_with_transcript=-13bp_to_NM_007288,uc003fad.1_5end | |||
|cluster_id=chr3:154797928..154797939,+ | |||
|coexpression_cluster_id=C2729 | |||
|description=CAGE_peak_18_at_MME_5end | |||
|id=chr3:154797928..154797939,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.43e-14!180;CL:0000136!4.95e-11!15;CL:0000057!7.24e-09!75;CL:0002620!1.13e-08!23;CL:0000048!8.62e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.10e-28;13!CL:0000775;5.69e-11;3!CL:0002521;9.68e-11;3!CL:0002580;2.54e-09;3!CL:0002561;8.37e-08;2!CL:0002617;1.14e-07;2!CL:0002588;2.86e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.40e-24,15;CL:0000775,5.64e-11,3;CL:0002521,9.45e-11,3;CL:0002580,3.05e-09,3;CL:0002561,8.41e-08,2;CL:0002617,1.02e-07,2;CL:0002588,3.52e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!5.37e-09!45;UBERON:0002416!5.37e-09!45;UBERON:0003102!1.09e-08!95;UBERON:0002097!1.47e-07!40;UBERON:0004290!2.98e-07!70;UBERON:0000914!6.47e-07!83;UBERON:0002329!6.47e-07!83;UBERON:0003077!6.47e-07!83;UBERON:0003059!6.47e-07!83;UBERON:0007282!6.47e-07!83;UBERON:0009618!6.47e-07!83;UBERON:0007285!6.47e-07!83;UBERON:0002100!8.24e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;9.68e-11;3!UBERON:0000310;2.06e-10;10!UBERON:0001443;2.11e-09;11!UBERON:0005933;8.37e-08;2!UBERON:0005942;8.37e-08;2!UBERON:0005932;8.37e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,9.45e-11,3;UBERON:0000310,2.21e-10,10;UBERON:0001443,2.24e-09,11;UBERON:0005933,8.41e-08,2;UBERON:0005942,8.41e-08,2;UBERON:0005932,8.41e-08,2 | |||
|phase1_expression=2.72517568905835,5.35251309727458,2.11431606143957,0,1.78784437770915,0,5.06599756336621,2.52687949370732,4.70134130759709,0,0,0,0.263766978228454,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.794455084879313,1.14734648299525,0,0,0,0,0,0.134710672069688,0,0,0,0,1.5608003841516,0,0.896692083310806,0,0.647491777472526,0.140450806702248,0.61246251376468,0,0.619954687054593,2.37600571456411,0.989067717114227,0,0,0.505008341862199,0.125118519871964,0,0,0,0.751190294532984,0,0.538168907066586,1.49490172172997,0.423863802319124,0,0.412210116953756,0.515281080091258,0.930584281657949,0.675105328965065,0.68205903612839,0.252433774244115,1.19664868234989,0,0,0.201504196455281,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,4.17931135228781,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698476837213859,1.90994212779139,0,0,0.308482478109971,1.8020583470635,0.571652865261156,0,0,0,0.775630294546667,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,1.62786481617433,1.64648067356154,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.410952645100767,1.96967059563885,0,0,0,0,0.254094624222463,0,0,0,0,4.49404214368309,8.97484377612075,4.14415513436035,0.12269149171914,0,0.271265023699736,0,0.356857977594324,0,0,1.80567659836631,0,0,0,0.184369168541703,3.73599542212756,0,0,0,0.215714200818617,0,0,0,0,1.48864684691266,1.68808170616869,1.12264037773229,0.256278298511402,1.53512174720011,0,0,0,0,0.328508624055237,0,0,0,0,0.0920809889358963,0.34444334449382,0.182091168006717,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0.183138929636687,0.165018999841176,0,0,0,0.193341436584244,0.462145851343933,0.614014698904518,1.10269257987624,2.90034661144339,3.0453505721988,0.596586391912706,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,1.116475108079,1.2655176988749,0.762520775695299,0,2.99557291623744,0,0,0.719489830333259,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,1.29070216983646,4.12645972255109,0,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0,0,0,1.03558180854457,0,0,0,0,0,0,0.569647187174163,0.952927101831156,0.411362273086194,1.94541993357815,0.540031437238115,0,0.106824071127473,0,0,0,1.87549976869378,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0.47748896947538,0,1.22864280839693,0,0,0.890469640183247,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6763985144408,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0.822251547880505,0.19871461170299,0,0,0.0801588202515337,1.92107695265417,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04894838977915,1.25891011523995,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.439656701034247,0,0.129282956361551,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,3.80812462358632,2.506898940227,3.36980134439808,8.19681576774511,0.157054096250234,0,0,0,0,0,0,0,0,0,2.28372266835974,0,0,0,0,0.701139929541673,0.554805861502613,0.757612021100357,1.0062716070103,0,0.686520205190771,0.302461847526478,0,0,0,2.69881867298163,0,0.414706207840855,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0.545545977607678,0,0.464033759878494,0,0,0.686791410365586,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0.607719912354764,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,2.57232014156128,0.203909198930495,0,0,0,0.235479278551542,0,0.840816489941367,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,1.77498001095848,0.852134047591577,0,0,0,0,0,0,0.487671699929078,0.647428837187895,0.205325613712494,0,0.485710993059139,0,0.198950775161368,0,0,0,0,18.6761462621226,3.49695296806332,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81929524566941,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.106727345877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| |phase1_expression=2.72517568905835,5.35251309727458,2.11431606143957,0,1.78784437770915,0,5.06599756336621,2.52687949370732,4.70134130759709,0,0,0,0.263766978228454,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.794455084879313,1.14734648299525,0,0,0,0,0,0.134710672069688,0,0,0,0,1.5608003841516,0,0.896692083310806,0,0.647491777472526,0.140450806702248,0.61246251376468,0,0.619954687054593,2.37600571456411,0.989067717114227,0,0,0.505008341862199,0.125118519871964,0,0,0,0.751190294532984,0,0.538168907066586,1.49490172172997,0.423863802319124,0,0.412210116953756,0.515281080091258,0.930584281657949,0.675105328965065,0.68205903612839,0.252433774244115,1.19664868234989,0,0,0.201504196455281,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,4.17931135228781,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698476837213859,1.90994212779139,0,0,0.308482478109971,1.8020583470635,0.571652865261156,0,0,0,0.775630294546667,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,1.62786481617433,1.64648067356154,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.410952645100767,1.96967059563885,0,0,0,0,0.254094624222463,0,0,0,0,4.49404214368309,8.97484377612075,4.14415513436035,0.12269149171914,0,0.271265023699736,0,0.356857977594324,0,0,1.80567659836631,0,0,0,0.184369168541703,3.73599542212756,0,0,0,0.215714200818617,0,0,0,0,1.48864684691266,1.68808170616869,1.12264037773229,0.256278298511402,1.53512174720011,0,0,0,0,0.328508624055237,0,0,0,0,0.0920809889358963,0.34444334449382,0.182091168006717,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0.183138929636687,0.165018999841176,0,0,0,0.193341436584244,0.462145851343933,0.614014698904518,1.10269257987624,2.90034661144339,3.0453505721988,0.596586391912706,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,1.116475108079,1.2655176988749,0.762520775695299,0,2.99557291623744,0,0,0.719489830333259,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,1.29070216983646,4.12645972255109,0,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0,0,0,1.03558180854457,0,0,0,0,0,0,0.569647187174163,0.952927101831156,0.411362273086194,1.94541993357815,0.540031437238115,0,0.106824071127473,0,0,0,1.87549976869378,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0.47748896947538,0,1.22864280839693,0,0,0.890469640183247,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6763985144408,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0.822251547880505,0.19871461170299,0,0,0.0801588202515337,1.92107695265417,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04894838977915,1.25891011523995,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.439656701034247,0,0.129282956361551,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,3.80812462358632,2.506898940227,3.36980134439808,8.19681576774511,0.157054096250234,0,0,0,0,0,0,0,0,0,2.28372266835974,0,0,0,0,0.701139929541673,0.554805861502613,0.757612021100357,1.0062716070103,0,0.686520205190771,0.302461847526478,0,0,0,2.69881867298163,0,0.414706207840855,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0.545545977607678,0,0.464033759878494,0,0,0.686791410365586,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0.607719912354764,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,2.57232014156128,0.203909198930495,0,0,0,0.235479278551542,0,0.840816489941367,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,1.77498001095848,0.852134047591577,0,0,0,0,0,0,0.487671699929078,0.647428837187895,0.205325613712494,0,0.485710993059139,0,0.198950775161368,0,0,0,0,18.6761462621226,3.49695296806332,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81929524566941,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.106727345877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| ||
|short_description=p18@MME | |||
}} | }} |
Latest revision as of 04:49, 16 September 2015
Short description: | p18@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_MME_5end |
Coexpression cluster: | C2729_small_colon_mature_Hair_Adipocyte_temporal_duodenum |
Association with transcript: | -13bp_to_NM_007288, uc003fad.1_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.40e-24 | 15 |
neutrophil | 5.64e-11 | 3 |
subcutaneous fat cell | 9.45e-11 | 3 |
preadipocyte of the breast | 3.05e-09 | 3 |
outer root sheath cell | 8.41e-08 | 2 |
adipocyte of breast | 1.02e-07 | 2 |
smooth muscle cell of the umbilical vein | 3.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 9.45e-11 | 3 |
breast | 2.21e-10 | 10 |
chest | 2.24e-09 | 11 |
hair root sheath | 8.41e-08 | 2 |
hair outer root sheath | 8.41e-08 | 2 |
bulb of hair follicle | 8.41e-08 | 2 |