FFCP PHASE1:Hg19::chr1:1142084..1142097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8784 | |EntrezGene=8784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11914 | |HGNC=11914 | ||
|TSSclassifier=strong | |||
|UniProt=Q5U0I4,Q9Y5U5,B1AME3 | |UniProt=Q5U0I4,Q9Y5U5,B1AME3 | ||
|association_with_transcript=0bp_to_NM_004195,NM_148901,NM_148902,uc001adb.2,uc001adc.2,uc001add.2_5end | |||
|cluster_id=chr1:1142084..1142097,- | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_3_at_TNFRSF18_5end | |||
|id=chr1:1142084..1142097,- | |||
|ontology_enrichment_celltype=CL:0000542!1.70e-27!53;CL:0000051!1.70e-27!53;CL:0000838!4.83e-26!52;CL:0000738!1.63e-23!140;CL:0000988!1.26e-21!182;CL:0000945!4.45e-21!24;CL:0000826!4.45e-21!24;CL:0002087!4.97e-21!119;CL:0000037!2.76e-20!172;CL:0000566!2.76e-20!172;CL:0000236!1.79e-19!14;CL:0002031!1.30e-18!124;CL:0002032!7.77e-18!165;CL:0000837!7.77e-18!165;CL:0000080!6.74e-12!6;CL:0000623!9.79e-07!3;CL:0000825!9.79e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.41e-30;13!CL:0000945;4.45e-30;24!CL:0000542;2.05e-18;53!CL:0000946;1.14e-07;1!CL:0000786;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.38e-35,14;CL:0000945,4.41e-30,24;CL:0000826,4.41e-30,24;CL:0000542,1.12e-27,53;CL:0000051,1.12e-27,53;CL:0000838,1.07e-24,52;CL:0000988,1.19e-14,177;CL:0002087,3.58e-14,115;CL:0002031,1.83e-13,120;CL:0000738,5.33e-13,136;CL:0002032,9.53e-12,161;CL:0000837,9.53e-12,161;CL:0000037,4.27e-11,168;CL:0000946,1.87e-07,1;CL:0000786,1.87e-07,1;CL:0000980,1.87e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.05e-18;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.09e-08;1!DOID:0060061;3.09e-08;1!DOID:8691;3.09e-08;1!DOID:12603;1.14e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.10e-08,1;DOID:0060061,3.10e-08,1;DOID:8691,3.10e-08,1;DOID:12603,9.72e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@TNFRSF18 | |||
}} | }} |
Latest revision as of 05:57, 16 September 2015
Short description: | p3@TNFRSF18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNFRSF18_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | 0bp_to_NM_004195, NM_148901, NM_148902, uc001adb.2, uc001adc.2, uc001add.2_5end |
EntrezGene: | TNFRSF18 |
HGNC: | 11914 |
UniProt: | Q5U0I4Q9Y5U5B1AME3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.38e-35 | 14 |
lymphocyte of B lineage | 4.41e-30 | 24 |
pro-B cell | 4.41e-30 | 24 |
lymphocyte | 1.12e-27 | 53 |
common lymphoid progenitor | 1.12e-27 | 53 |
lymphoid lineage restricted progenitor cell | 1.07e-24 | 52 |
hematopoietic cell | 1.19e-14 | 177 |
nongranular leukocyte | 3.58e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.83e-13 | 120 |
leukocyte | 5.33e-13 | 136 |
hematopoietic oligopotent progenitor cell | 9.53e-12 | 161 |
hematopoietic multipotent progenitor cell | 9.53e-12 | 161 |
hematopoietic stem cell | 4.27e-11 | 168 |
antibody secreting cell | 1.87e-07 | 1 |
plasma cell | 1.87e-07 | 1 |
plasmablast | 1.87e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.10e-08 | 1 |
cutaneous T cell lymphoma | 3.10e-08 | 1 |
mycosis fungoides | 3.10e-08 | 1 |
acute leukemia | 9.72e-08 | 1 |