FFCP PHASE1:Hg19::chr19:1491038..1491049,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92840 | |EntrezGene=92840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30078 | |HGNC=30078 | ||
|TSSclassifier=strong | |||
|UniProt=A8MWX0 | |UniProt=A8MWX0 | ||
|association_with_transcript=6bp_to_ENST00000395479_5end | |association_with_transcript=6bp_to_ENST00000395479_5end | ||
|cluster_id=chr19:1491038..1491049,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_REEP6_5end | |description=CAGE_peak_3_at_REEP6_5end | ||
|id=chr19:1491038..1491049,+ | |id=chr19:1491038..1491049,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002521;8.75e-16;3!CL:0000136;3.15e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,8.44e-16,3;CL:0000136,3.66e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;8.75e-16;3!UBERON:0002072;7.60e-10;5!UBERON:0001897;9.01e-07;2!UBERON:0010225;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,8.44e-16,3;UBERON:0002072,7.44e-10,5;UBERON:0001897,7.61e-07,2;UBERON:0010225,7.61e-07,2 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,2.53299878168311,1.26343974685366,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.419317291016752,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0,0,0,0,0.473447805734733,1.94826728407911,0.111410456885174,0,0.221533894583621,0,0,0,0,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0.766440987203842,0.34362744548263,0.253019692019503,0,0.651083453856419,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0.434539556882471,0,0.486634870302636,0,0,0,8.77559805834675,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,2.1349799145941,0.49333509683432,0.311211035399766,0.134710672069688,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0.169560592310488,0,0,0.573609190778008,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0.264145302039678,0.207328115540772,0,0.37872730027914,0.253991577168676,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0.391602314925481,0,0.413536052245775,0.215714200818617,0,1.21251028578504,0,0.604780586659361,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.178064071293475,0.330569830721956,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0.842516912477962,0.48763373908959,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.491245205065606,0.7133421029625,0,0,0.329294892959902,0,0,0,0,0,0,0,1.68471475667626,0,0.459446800413919,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,2.50634477090067,0.338583555603207,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0.223676107892416,0.500547425135725,0.19538809540204,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0.18714054040822,0.146508179271894,0.728163130497081,0.222886768554957,0.284136146806413,0,0,0,0,0.562677665642051,0,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,0,2.04628948090749,0.197286811273867,0,0,0.969332746095218,0.371072392647405,0,0.7812832832557,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0.274792780205587,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0,0.635746315921515,0,0,0,0,0,0.442287822516696,0,0,0,0.104421949505455,0.202203398942031,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0,0,0,0.277349346026277,0.520679215005393,0.391969589657511,0.0870592065804026,0.698906672968121,0,0,0,0,0.387956065953678,0.529536760149002,0,0,0,0.316553979779393,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0.248505071130865,0,0.271808412147228,0,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0.415440338029185,0.2249738915515,0.77380195455795,0.607495566580247,0.335434687599266,0,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,1.08803560673895,0,0.612691153526923,0,0,0.886068179966986,0.244052529803926,0,0.573409195690071,0.110929051536852,0.434674820589684,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0.398594520940089,0.327130788511688,0,0,0.422624246717254,0.19998739585493,0.320075189082423,0.172214979660816,0,0,0,0.622077260032973,0,0.215649622793364,0.157265941855896,0,1.01839517972415,0,0.247871528518004,0,0,0,0,0.705351887381368,0,0.706521476061055,0,0.159633859057151,0,0,0.829887029570615,0,0,0.294443155503077,0.11796972334774,0,0,0.381382095467167,0.690359926060101,0,0.0752103283492573,0,1.56302802246618,0,0,0.295712172434091,0.472763092328763,0,0,0.443910671357348,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.271878931907327,0.591954962065642,0,0.111231401892069,0.39246546425257,0.471346769748006,0,0,0.215927591218621,0,0.500335809236594,0.158013611732727,0.116241425368125,0,0,0,0.3414369541879,0.691259661814092,0.430227358820278,0,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0,0,0.205325613712494,1.1598144313382,0,0,0.596852325484105,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0.962896400270019,0,0.458729283404541,0,0,0.815897882290976,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0.203977659483963,0,0,0.250707539292375,19.8540189331787,23.5808434537437,1.65833887891756,0.20686599172379,0,0.23806443146374,0.129177819672012,0,0,0.318235791390825,0,0.217716747896961,0,0.673520530145875,0.143444410785353,0,0.162806537221949,0,0,0.179650404213174,0,0,0,0,0.201273793591026,0 | |phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,2.53299878168311,1.26343974685366,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.419317291016752,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0,0,0,0,0.473447805734733,1.94826728407911,0.111410456885174,0,0.221533894583621,0,0,0,0,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0.766440987203842,0.34362744548263,0.253019692019503,0,0.651083453856419,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0.434539556882471,0,0.486634870302636,0,0,0,8.77559805834675,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,2.1349799145941,0.49333509683432,0.311211035399766,0.134710672069688,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0.169560592310488,0,0,0.573609190778008,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0.264145302039678,0.207328115540772,0,0.37872730027914,0.253991577168676,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0.391602314925481,0,0.413536052245775,0.215714200818617,0,1.21251028578504,0,0.604780586659361,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.178064071293475,0.330569830721956,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0.842516912477962,0.48763373908959,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.491245205065606,0.7133421029625,0,0,0.329294892959902,0,0,0,0,0,0,0,1.68471475667626,0,0.459446800413919,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,2.50634477090067,0.338583555603207,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0.223676107892416,0.500547425135725,0.19538809540204,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0.18714054040822,0.146508179271894,0.728163130497081,0.222886768554957,0.284136146806413,0,0,0,0,0.562677665642051,0,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,0,2.04628948090749,0.197286811273867,0,0,0.969332746095218,0.371072392647405,0,0.7812832832557,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0.274792780205587,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0,0.635746315921515,0,0,0,0,0,0.442287822516696,0,0,0,0.104421949505455,0.202203398942031,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0,0,0,0.277349346026277,0.520679215005393,0.391969589657511,0.0870592065804026,0.698906672968121,0,0,0,0,0.387956065953678,0.529536760149002,0,0,0,0.316553979779393,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0.248505071130865,0,0.271808412147228,0,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0.415440338029185,0.2249738915515,0.77380195455795,0.607495566580247,0.335434687599266,0,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,1.08803560673895,0,0.612691153526923,0,0,0.886068179966986,0.244052529803926,0,0.573409195690071,0.110929051536852,0.434674820589684,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0.398594520940089,0.327130788511688,0,0,0.422624246717254,0.19998739585493,0.320075189082423,0.172214979660816,0,0,0,0.622077260032973,0,0.215649622793364,0.157265941855896,0,1.01839517972415,0,0.247871528518004,0,0,0,0,0.705351887381368,0,0.706521476061055,0,0.159633859057151,0,0,0.829887029570615,0,0,0.294443155503077,0.11796972334774,0,0,0.381382095467167,0.690359926060101,0,0.0752103283492573,0,1.56302802246618,0,0,0.295712172434091,0.472763092328763,0,0,0.443910671357348,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.271878931907327,0.591954962065642,0,0.111231401892069,0.39246546425257,0.471346769748006,0,0,0.215927591218621,0,0.500335809236594,0.158013611732727,0.116241425368125,0,0,0,0.3414369541879,0.691259661814092,0.430227358820278,0,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0,0,0.205325613712494,1.1598144313382,0,0,0.596852325484105,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0.962896400270019,0,0.458729283404541,0,0,0.815897882290976,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0.203977659483963,0,0,0.250707539292375,19.8540189331787,23.5808434537437,1.65833887891756,0.20686599172379,0,0.23806443146374,0.129177819672012,0,0,0.318235791390825,0,0.217716747896961,0,0.673520530145875,0.143444410785353,0,0.162806537221949,0,0,0.179650404213174,0,0,0,0,0.201273793591026,0 | ||
|short_description=p3@REEP6 | |short_description=p3@REEP6 | ||
}} | }} |
Latest revision as of 06:12, 16 September 2015
Short description: | p3@REEP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_REEP6_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 6bp_to_ENST00000395479_5end |
EntrezGene: | REEP6 |
HGNC: | 30078 |
UniProt: | A8MWX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 8.44e-16 | 3 |
fat cell | 3.66e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 8.44e-16 | 3 |
hypodermis | 7.44e-10 | 5 |
dorsal plus ventral thalamus | 7.61e-07 | 2 |
thalamic complex | 7.61e-07 | 2 |