FFCP PHASE1:Hg19::chr1:114414441..114414452,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26191 | |EntrezGene=26191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9652 | |HGNC=9652 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2R2 | |UniProt=Q9Y2R2 | ||
|association_with_transcript=-60bp_to_ENST00000359785_5end | |association_with_transcript=-60bp_to_ENST00000359785_5end | ||
|cluster_id=chr1:114414441..114414452,- | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_5_at_PTPN22_5end | |description=CAGE_peak_5_at_PTPN22_5end | ||
|id=chr1:114414441..114414452,- | |id=chr1:114414441..114414452,- | ||
|ontology_enrichment_celltype=CL:0000945!9.02e-31!24;CL:0000826!9.02e-31!24;CL:0000542!7.17e-18!53;CL:0000051!7.17e-18!53;CL:0000946!1.93e-16!1;CL:0000786!1.93e-16!1;CL:0000980!1.93e-16!1;CL:0000838!5.17e-14!52;CL:0002087!1.51e-09!119;CL:0000785!6.94e-09!2;CL:0000955!6.94e-09!2;CL:0000818!6.94e-09!2;CL:0000954!6.94e-09!2;CL:0000816!6.94e-09!2;CL:0000738!5.40e-08!140;CL:0002031!3.38e-07!124 | |ontology_enrichment_celltype=CL:0000945!9.02e-31!24;CL:0000826!9.02e-31!24;CL:0000542!7.17e-18!53;CL:0000051!7.17e-18!53;CL:0000946!1.93e-16!1;CL:0000786!1.93e-16!1;CL:0000980!1.93e-16!1;CL:0000838!5.17e-14!52;CL:0002087!1.51e-09!119;CL:0000785!6.94e-09!2;CL:0000955!6.94e-09!2;CL:0000818!6.94e-09!2;CL:0000954!6.94e-09!2;CL:0000816!6.94e-09!2;CL:0000738!5.40e-08!140;CL:0002031!3.38e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.01e-09;24!CL:0000542;2.32e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.01e-09,24;CL:0000826,1.01e-09,24 | |||
|ontology_enrichment_development_v019=CL:0000051;2.32e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.73e-38!10;DOID:630!8.86e-17!1;DOID:0050177!8.86e-17!1;DOID:0050427!8.86e-17!1;DOID:12603!1.21e-16!1;DOID:2355!3.07e-16!1;DOID:2531!1.44e-10!51;DOID:0060083!1.44e-10!51;DOID:3193!4.02e-09!2;DOID:962!4.02e-09!2;DOID:74!8.74e-09!2 | |ontology_enrichment_disease=DOID:0060058!4.73e-38!10;DOID:630!8.86e-17!1;DOID:0050177!8.86e-17!1;DOID:0050427!8.86e-17!1;DOID:12603!1.21e-16!1;DOID:2355!3.07e-16!1;DOID:2531!1.44e-10!51;DOID:0060083!1.44e-10!51;DOID:3193!4.02e-09!2;DOID:962!4.02e-09!2;DOID:74!8.74e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.81e-21;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.81e-21,10 | |||
|ontology_enrichment_uberon=UBERON:0002372!1.41e-16!1;UBERON:0001961!1.41e-16!1;UBERON:0001744!1.41e-16!1;UBERON:0001735!1.41e-16!1;UBERON:0003714!4.02e-09!2;UBERON:0000010!9.85e-08!8 | |ontology_enrichment_uberon=UBERON:0002372!1.41e-16!1;UBERON:0001961!1.41e-16!1;UBERON:0001744!1.41e-16!1;UBERON:0001735!1.41e-16!1;UBERON:0003714!4.02e-09!2;UBERON:0000010!9.85e-08!8 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p5@PTPN22 | |short_description=p5@PTPN22 | ||
}} | }} |
Latest revision as of 06:17, 16 September 2015
Short description: | p5@PTPN22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTPN22_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | -60bp_to_ENST00000359785_5end |
EntrezGene: | PTPN22 |
HGNC: | 9652 |
UniProt: | Q9Y2R2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.01e-09 | 24 |
pro-B cell | 1.01e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.81e-21 | 10 |