FFCP PHASE1:Hg19::chr8:128747729..128747748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4609 | |EntrezGene=4609 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7553 | |HGNC=7553 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000517291,uc003ysh.1_5end | |association_with_transcript=-16bp_to_ENST00000517291,uc003ysh.1_5end | ||
|cluster_id=chr8:128747729..128747748,+ | |||
|coexpression_cluster_id=C86 | |coexpression_cluster_id=C86 | ||
|description=CAGE_peak_14_at_MYC_5end | |description=CAGE_peak_14_at_MYC_5end | ||
|id=chr8:128747729..128747748,+ | |id=chr8:128747729..128747748,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.88e-16!254;CL:0000012!1.59e-10!682;CL:0000548!1.88e-10!679;CL:0000004!1.88e-10!679;CL:0000255!1.88e-10!679;CL:0000223!4.46e-10!59;CL:0002076!2.14e-09!43;CL:0000063!3.49e-08!578;CL:0000220!5.49e-08!246;CL:0002321!6.87e-08!248;CL:0000003!7.93e-08!722;CL:0000542!1.14e-07!53;CL:0000051!1.14e-07!53;CL:0000838!2.13e-07!52;CL:0002251!6.45e-07!21 | |ontology_enrichment_celltype=CL:0000066!7.88e-16!254;CL:0000012!1.59e-10!682;CL:0000548!1.88e-10!679;CL:0000004!1.88e-10!679;CL:0000255!1.88e-10!679;CL:0000223!4.46e-10!59;CL:0002076!2.14e-09!43;CL:0000063!3.49e-08!578;CL:0000220!5.49e-08!246;CL:0002321!6.87e-08!248;CL:0000003!7.93e-08!722;CL:0000542!1.14e-07!53;CL:0000051!1.14e-07!53;CL:0000838!2.13e-07!52;CL:0002251!6.45e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.24e-12;14!CL:0000240;9.41e-09;6!CL:0000311;9.41e-09;6!CL:0000079;9.41e-09;6!CL:0000237;9.41e-09;6!CL:0000362;2.89e-08;9!CL:0002077;5.28e-08;34!CL:0000575;3.30e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.24e-12,14;CL:0000066,4.59e-09,253;CL:0000240,1.16e-08,6;CL:0000311,1.16e-08,6;CL:0000079,1.16e-08,6;CL:0000237,1.16e-08,6;CL:0000036,1.16e-08,6;CL:0000357,1.16e-08,6;CL:0000114,1.16e-08,6;CL:0002077,1.45e-08,34;CL:0000362,2.83e-08,9;CL:0002076,8.10e-08,42;CL:0000575,2.77e-07,2;CL:0000317,7.31e-07,2;CL:1000448,7.31e-07,2;CL:0002308,7.31e-07,2;CL:0002140,7.31e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000357;9.41e-09;6!CL:0000114;9.41e-09;6 | |||
|ontology_enrichment_disease=DOID:14566!2.00e-16!239;DOID:162!6.44e-16!235;DOID:305!4.76e-10!106;DOID:0050686!4.95e-09!137;DOID:0050687!9.12e-08!143;DOID:2531!1.54e-07!51;DOID:0060083!1.54e-07!51 | |ontology_enrichment_disease=DOID:14566!2.00e-16!239;DOID:162!6.44e-16!235;DOID:305!4.76e-10!106;DOID:0050686!4.95e-09!137;DOID:0050687!9.12e-08!143;DOID:2531!1.54e-07!51;DOID:0060083!1.54e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.53e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.75e-07,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.47e-07;4!UBERON:0004785;2.47e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.25e-07,4;UBERON:0004785,1.25e-07,4;UBERON:0002419,7.31e-07,2;UBERON:0007771,7.31e-07,2;UBERON:0003297,7.31e-07,2;UBERON:0001821,7.31e-07,2;UBERON:0003487,7.31e-07,2;UBERON:0001820,7.31e-07,2;UBERON:0005089,7.31e-07,2;UBERON:0005088,7.31e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0.125542639594803,1.37544130346312,1.06730766284929,1.33808328233255,0,0.383829398097213,0,2.75826367343678,0.30120591877825,0.369754010166788,0.309868802321207,0.426507697462265,0,0,0.802177789880567,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0.790152254325231,0.393419540227666,0,0.411202997999018,0,0.32592226663359,0,0,0.222820913770347,0,0.221533894583621,0,0,0,0,0,0,0.296573126324121,0,0,0.113309342697566,0,0,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.201606743224732,1.06976078313403,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0,3.27865759463288,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.626984899610432,0,0,0,0,0.760272105718513,0.732186172644509,0,0,0.17859945656816,0,0.112611480483322,0,0,0.549605231791222,0,0,0.872188104285069,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.302714855289863,0,0,0.936480230490962,1.1409436430889,0.896692083310806,0,0.161872944368132,0.421352420106746,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0.193260853163297,1.09098448236334,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0.721879481669586,0.354920400119532,0,0.723033089650446,0.110293972732394,0.653638332277218,0,0.404493924480493,0.392442930250692,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0,0,3.73150970389327,2.24803506515239,1.20634766893957,3.24059558054854,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0.148631162288728,0.93733833986777,0.335964256397719,1.27597587518148,0.447792613514241,1.16253575405585,1.15014803749563,0.985326475791887,0,0,0,0,0.063497894292169,0.763976851116555,2.34434894420094,1.71072446022705,0.205654985406647,1.8020583470635,0.857479297891735,0,0,0.22001485746285,0.258543431515556,0,0.845302752556,0,0,0,1.41849132023278,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0.896681151948218,0.197030760201927,0.646882724578552,0.256686072559497,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.348631135379878,0.362578348774867,1.00253235151642,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0.211103257785751,0,0,0,1.54227252690289,0,0,0,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,1.62689197332152,0,0,0.165018999841176,1.72279661398852,1.30012049207304,0,0.193341436584244,0.154048617114644,0.767518373630648,0.827019434907183,0.214840489736547,0,0.681813019328807,0.356128142586949,0.661139661443912,0.576570202095319,1.02090169995667,0.30347334256665,0,0.31481234683064,0,0.616067160352178,0,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.286822704408103,0.196498082026242,0.35667105148125,0.354761064070598,0,0,0.379473173765715,0,0.769776901804097,2.01090682660736,5.44454924306613,0,0,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,1.47024129588619,0.371606350251437,1.00988449083511,0.569134746787313,0.318852545457645,2.19537308576098,0,0.846694330895531,0.324621940274555,0,0.228234679033192,11.5943122872037,0,0.169291777801603,1.4452926759333,2.01799707191048,0,0,0,0.447352215784832,0.166849141711909,0,0,0,0.811367035427949,0.33307196799782,0,0.37428108081644,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0.140669416410513,0.222617410045812,1.97764649072111,0,0,0,2.51932747854276,0.20453736500431,2.21552649829925,0,0.269605053441981,0.537063524026827,0,0,0,0,0,0,0,0.7812832832557,0.0874599999961957,0,0.682760689712998,0,0,0,9.03974301488088,0,0,0.120596438625408,0,0,0,0,0.32681539055697,0,0,0.455768223388005,0,0,0.108647371922008,0,0,1.06606955203727,0,1.2558420511602,0.166211681900156,0.451191321234361,0.392125068635479,0.335643173951685,0.569261198172555,2.38404868470568,0,0.163232808159148,0.282706142867882,17.7438684588515,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.417687798021821,0,0,0,0.547364367646998,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0,0,0,0,0.3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| ||
|short_description=p14@MYC | |short_description=p14@MYC | ||
}} | }} |
Latest revision as of 06:32, 16 September 2015
Short description: | p14@MYC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_MYC_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | -16bp_to_ENST00000517291, uc003ysh.1_5end |
EntrezGene: | MYC |
HGNC: | 7553 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.24e-12 | 14 |
epithelial cell | 4.59e-09 | 253 |
stratified squamous epithelial cell | 1.16e-08 | 6 |
keratin accumulating cell | 1.16e-08 | 6 |
stratified epithelial cell | 1.16e-08 | 6 |
keratinizing barrier epithelial cell | 1.16e-08 | 6 |
epithelial fate stem cell | 1.16e-08 | 6 |
stratified epithelial stem cell | 1.16e-08 | 6 |
surface ectodermal cell | 1.16e-08 | 6 |
ecto-epithelial cell | 1.45e-08 | 34 |
epidermal cell | 2.83e-08 | 9 |
endo-epithelial cell | 8.10e-08 | 42 |
corneal epithelial cell | 2.77e-07 | 2 |
sebum secreting cell | 7.31e-07 | 2 |
epithelial cell of sweat gland | 7.31e-07 | 2 |
epithelial cell of skin gland | 7.31e-07 | 2 |
acinar cell of sebaceous gland | 7.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.25e-07 | 4 |
respiratory system mucosa | 1.25e-07 | 4 |
skin gland | 7.31e-07 | 2 |
epidermis gland | 7.31e-07 | 2 |
gland of integumental system | 7.31e-07 | 2 |
sebaceous gland | 7.31e-07 | 2 |
skin sebaceous gland | 7.31e-07 | 2 |
sweat gland | 7.31e-07 | 2 |
sweat gland placode | 7.31e-07 | 2 |
sebaceous gland placode | 7.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.75e-07 | 14 |