FFCP PHASE1:Hg19::chr1:11561906..11561913,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57540 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29251 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P2K9 | |||
|association_with_transcript=-78bp_to_AL117236_5end | |||
|cluster_id=chr1:11561906..11561913,+ | |||
|description=CAGE_peak_7_at_PTCHD2_5end | |||
|id=chr1:11561906..11561913,+ | |||
|ontology_enrichment_celltype=CL:0000810!5.96e-08!1;CL:0000895!5.96e-08!1;CL:0002436!5.96e-08!1;CL:0002427!5.96e-08!1;CL:0002428!5.96e-08!1;CL:0002429!5.96e-08!1;CL:0002433!5.96e-08!1;CL:0002431!5.96e-08!1;CL:0002432!5.96e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002097;6.30e-26;2!CL:0002535;6.30e-26;2!CL:0000174;8.69e-18;3!CL:0000150;8.14e-07;9!CL:0000163;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.32e-26,2;CL:0002097,5.56e-26,2;CL:0000174,8.00e-18,3;CL:0000150,7.91e-07,9;CL:0000163,7.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;3.10e-11;5!DOID:170;1.38e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.66e-11,5;DOID:170,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000200!2.16e-16!6;UBERON:0001869!1.23e-13!32;UBERON:0001950!1.29e-13!20;UBERON:0001871!7.08e-13!7;UBERON:0002020!8.68e-13!34;UBERON:0003528!8.68e-13!34;UBERON:0001893!8.94e-13!34;UBERON:0002619!2.33e-12!22;UBERON:0001017!1.38e-11!82;UBERON:0005743!6.16e-11!86;UBERON:0001049!7.73e-11!57;UBERON:0005068!7.73e-11!57;UBERON:0006241!7.73e-11!57;UBERON:0007135!7.73e-11!57;UBERON:0000956!7.76e-11!25;UBERON:0000203!7.76e-11!25;UBERON:0002791!1.75e-10!33;UBERON:0002616!2.06e-10!59;UBERON:0002780!2.07e-10!41;UBERON:0001890!2.07e-10!41;UBERON:0006240!2.07e-10!41;UBERON:0000955!3.23e-10!69;UBERON:0006238!3.23e-10!69;UBERON:0003080!3.90e-10!42;UBERON:0000073!1.13e-09!94;UBERON:0001016!1.13e-09!94;UBERON:0003075!1.64e-09!86;UBERON:0007284!1.64e-09!86;UBERON:0007023!3.77e-09!115;UBERON:0002771!3.84e-09!3;UBERON:0002346!5.52e-09!90;UBERON:0000473!5.94e-08!8;UBERON:0001874!1.91e-07!1;UBERON:0002902!2.04e-07!1;UBERON:0009899!2.04e-07!1;UBERON:0002581!2.17e-07!1;UBERON:0007190!2.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;6.30e-26;2!UBERON:0004801;6.30e-26;2!UBERON:0002369;8.69e-18;3!UBERON:0001235;8.69e-18;3!UBERON:0006858;8.69e-18;3!UBERON:0000002;1.38e-09;6!UBERON:0001560;1.38e-09;6!UBERON:0000473;1.64e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.32e-26,2;UBERON:0004801,4.32e-26,2;UBERON:0002369,8.00e-18,3;UBERON:0001235,8.00e-18,3;UBERON:0006858,8.00e-18,3;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6;UBERON:0000473,1.69e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91530254476886,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54095864325843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.454672189309436,1.33982065078089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@PTCHD2 | |||
}} |
Latest revision as of 07:43, 16 September 2015
Short description: | p7@PTCHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PTCHD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -78bp_to_AL117236_5end |
EntrezGene: | PTCHD2 |
HGNC: | 29251 |
UniProt: | Q9P2K9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.32e-26 | 2 |
cortical cell of adrenal gland | 5.56e-26 | 2 |
steroid hormone secreting cell | 8.00e-18 | 3 |
glandular epithelial cell | 7.91e-07 | 9 |
endocrine cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.32e-26 | 2 |
cervix epithelium | 4.32e-26 | 2 |
adrenal gland | 8.00e-18 | 3 |
adrenal cortex | 8.00e-18 | 3 |
adrenal/interrenal gland | 8.00e-18 | 3 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
testis | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.66e-11 | 5 |
endocrine gland cancer | 1.32e-09 | 6 |