FFCP PHASE1:Hg19::chrX:7137633..7137646,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=412 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11425 | |||
|TSSclassifier=strong | |||
|UniProt=P08842 | |||
|association_with_transcript=136bp_to_ENST00000217961_5end | |||
|cluster_id=chrX:7137633..7137646,+ | |||
|coexpression_cluster_id=C2029 | |||
|description=CAGE_peak_9_at_STS_5end | |||
|id=chrX:7137633..7137646,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.15e-08!7;CL:0000586!1.15e-08!7;CL:0000819!3.02e-07!1;CL:0002563!7.20e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.21e-22;7!CL:0000586;3.21e-22;7!CL:0002253;1.86e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.45e-22,7;CL:0000586,3.45e-22,7;CL:0002253,1.71e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.75e-18;1!UBERON:0000358;9.49e-18;1!UBERON:0008425;1.44e-17;1 | |||
|ontology_enrichment_disease=DOID:0060058!6.10e-10!10;DOID:1799!1.97e-07!1;DOID:10165!1.97e-07!1;DOID:1798!1.97e-07!1;DOID:4960!2.52e-07!1;DOID:0070004!2.52e-07!1;DOID:0060073!3.02e-07!1;DOID:8675!3.02e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.44e-17;1!DOID:10165;1.44e-17;1!DOID:1798;1.44e-17;1!DOID:0060058;1.35e-07;10!DOID:3095;1.73e-07;22!DOID:2994;1.73e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.70e-17,1;DOID:10165,1.70e-17,1;DOID:1798,1.70e-17,1;DOID:0060058,1.33e-07,10;DOID:3095,1.77e-07,22;DOID:2994,1.77e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001869!5.53e-10!32;UBERON:0001049!5.84e-10!57;UBERON:0005068!5.84e-10!57;UBERON:0006241!5.84e-10!57;UBERON:0007135!5.84e-10!57;UBERON:0002780!1.13e-09!41;UBERON:0001890!1.13e-09!41;UBERON:0006240!1.13e-09!41;UBERON:0002616!1.46e-09!59;UBERON:0003080!2.04e-09!42;UBERON:0001893!2.39e-09!34;UBERON:0002020!2.42e-09!34;UBERON:0003528!2.42e-09!34;UBERON:0000200!3.57e-09!6;UBERON:0002619!1.67e-08!22;UBERON:0000955!8.82e-08!69;UBERON:0006238!8.82e-08!69;UBERON:0000956!1.84e-07!25;UBERON:0000203!1.84e-07!25;UBERON:0002791!1.99e-07!33;UBERON:0007190!3.62e-07!1;UBERON:0007023!4.59e-07!115;UBERON:0002581!5.84e-07!1;UBERON:0001882!6.57e-07!1;UBERON:0005403!6.57e-07!1;UBERON:0001242!7.20e-07!4;UBERON:0001262!7.20e-07!4;UBERON:0004786!7.20e-07!4;UBERON:0004808!7.20e-07!4;UBERON:0001277!7.20e-07!4;UBERON:0002022!7.40e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73257284294232,2.55904618477359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13697999995054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30296980092538,4.48788222048861,6.7361370591645,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,5.85435643073416,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p9@STS | |||
}} |
Latest revision as of 08:12, 16 September 2015
Short description: | p9@STS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_STS_5end |
Coexpression cluster: | C2029_choriocarcinoma_Burkitt_placenta_colon_lymphoma_breast_thalamus |
Association with transcript: | 136bp_to_ENST00000217961_5end |
EntrezGene: | STS |
HGNC: | 11425 |
UniProt: | P08842 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.45e-22 | 7 |
germ cell | 3.45e-22 | 7 |
epithelial cell of large intestine | 1.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.70e-17 | 1 |
endocrine pancreas cancer | 1.70e-17 | 1 |
pancreatic endocrine carcinoma | 1.70e-17 | 1 |
lymphoma | 1.33e-07 | 10 |
germ cell and embryonal cancer | 1.77e-07 | 22 |
germ cell cancer | 1.77e-07 | 22 |