FFCP PHASE1:Hg19::chrX:71497148..71497163,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6191 | |EntrezGene=6191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10424 | |HGNC=10424 | ||
|TSSclassifier=strong | |||
|UniProt=P62701 | |UniProt=P62701 | ||
|association_with_transcript=0bp_to_ENST00000316084_5end | |association_with_transcript=0bp_to_ENST00000316084_5end | ||
|cluster_id=chrX:71497148..71497163,- | |||
|coexpression_cluster_id=C1162 | |coexpression_cluster_id=C1162 | ||
|description=CAGE_peak_3_at_RPS4X_5end | |description=CAGE_peak_3_at_RPS4X_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!3.95e-19!254;CL:0002321!4.28e-12!248;CL:0000220!1.78e-11!246;CL:0002076!7.43e-09!43;CL:0000076!2.98e-07!62;CL:0000223!3.44e-07!59 | |ontology_enrichment_celltype=CL:0000066!3.95e-19!254;CL:0002321!4.28e-12!248;CL:0000220!1.78e-11!246;CL:0002076!7.43e-09!43;CL:0000076!2.98e-07!62;CL:0000223!3.44e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.31e-19,253;CL:0002321,3.48e-10,250;CL:0002076,2.77e-08,42;CL:0000076,1.61e-07,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!2.54e-17!239;DOID:162!7.35e-17!235;DOID:305!1.34e-12!106;DOID:0050687!2.65e-12!143 | |ontology_enrichment_disease=DOID:14566!2.54e-17!239;DOID:162!7.35e-17!235;DOID:305!1.34e-12!106;DOID:0050687!2.65e-12!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.69e-14,235;DOID:14566,3.54e-14,239;DOID:305,1.54e-11,106;DOID:0050687,1.35e-10,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.05e-07;9!UBERON:0001557;2.05e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.05e-07;9!UBERON:0001557;2.05e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.61e-07,9 | |||
|phase1_expression=0.363356758541113,0.428201047781966,1.12763523276777,0,0.893922188854576,0,5.06599756336621,5.68547886084148,1.30592814099919,8.10921990454979,2.09340350391728,0.218441372130172,0.263766978228454,0,0,0,1.20538905604795,0,0,0.861847406537515,0.612002073732759,0.313454721478088,0.85870796139317,2.18999080116615,0.87879847716362,2.13957536094264,1.80621296789881,2.20390187678302,0.786728553697808,0,0.154816123316076,2.75826367343678,3.0120591877825,3.69754010166788,2.71135202031056,1.70603078984906,0.587200878669695,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,1.45104619314292,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.422510572623884,0.212604299965044,0.209658645508376,0.22465726229299,0,0,0.570025487482497,0,0,0,0.546138611262131,0,0,0.400395987036012,1.72425731986345,0.661044872784862,0.954053754535364,0,1.17447437874188,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0.977766799900771,1.4203434172042,0,0.222820913770347,0,0.443067789167242,0,0.384273959177026,0,0.164437904603676,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0.113309342697566,0.383220493601921,0.68725489096526,0,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,2.01210257911091,1.2786256184353,1.80719576192283,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,1.41802225746102,0.886917589850256,1.66886092816939,0.72038491523742,1.82147644146271,3.33705998505986,0.324547393654683,0.348259474598534,0.398873881556595,0.715471872916026,0,0,0.79504962946682,3.4409383804245,1.04142150482278,0.56530794192401,1.25849830862972,0.825354125820202,2.08994966536811,0.775250277507987,0,0,0.402829317109147,2.28081631715554,0.24406205754817,2.94130464276695,0,1.69669483739752,0.44905874525234,1.35133776579987,0,2.84779697870439,0.732806975721629,0,0,3.92484646928281,0,2.40597972162702,1.58891016975863,0,1.41867352879343,1.12135520028461,2.1349799145941,0.74000264525148,0.622422070799533,0.942974704487816,1.9615428373615,0,0,0.70296429550139,1.24864030732128,3.99330275081114,1.64393548606981,3.64046945795671,1.61872944368132,2.52811452064047,1.63323337003915,1.10550885580591,0.309977343527296,2.37600571456411,0.494533858557114,0.910161361938026,1.43723628363248,2.69337782326506,2.50237039743928,1.38532057742091,0,0.30648779579902,0.600952235626387,2.1552114800404,0.358779271377724,0.640672166455702,0.635795703478686,1.20036438433761,0.412210116953756,0.257640540045629,0,1.0126579934476,0.194874010322397,0.504867548488229,0.184099797284599,0,0.355009592516614,0.302256294682921,1.69560592310488,1.54608682530637,1.90922284413584,0.573609190778008,6.09868530647977,3.31324420803713,6.04208502921496,4.66474747569167,6.81266297364197,9.48941133597158,0,0,2.76269842704961,0.928735856063958,1.44375896333917,3.43089720115547,4.04603256187444,4.57920956778616,3.52940712743661,4.79334777003293,6.8808479542218,4.04493924480493,7.2601942096378,4.23221872641029,0.738155454624648,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0.441463099414651,1.8448265781467,3.43135620597051,3.07300799144152,8.99214026060957,6.53438320675601,5.09236448371913,0,3.11980435583874,5.77325368101093,2.31860809950154,0.821860859650752,0.721832238805369,0.462985512576611,0.570762456703795,0,0,0,0,0.297262324577456,5.62403003920662,1.00789276919316,4.53680311175637,2.05984602216551,3.48760726216754,5.36735750831296,0.985326475791887,0.176096868026452,0.207328115540772,0.864719720501769,0.50496973370552,0.888970520090367,1.14596527667483,1.17217447210047,0,1.7480673759565,1.20137223137567,0.285826432630578,1.56983518083505,1.74384027533312,2.56684000373325,0.517086863031111,0,3.381211010224,0,0,1.54324424557285,0,1.8649552531127,0.428933980974443,0,0.823240336780769,2.60588947434988,1.06617584622764,3.16780749173372,1.20575750823834,1.74306691720059,0.099972991182057,0,0,2.10833939483032,0.958499421966331,0,1.42636905040718,1.30303176000821,0.205476322550383,1.61154866915906,0.784596007954691,0.788123040807709,0.215627574859517,0.128343036279748,1.52456774533478,1.30139853857622,2.31986643833309,2.51274398001523,1.27587750330633,0,0,0,0.12269149171914,0,0.542530047399471,0,1.07057393278297,0.157702415033935,0.468565659970853,0.601892199455438,0,0,1.99267679560631,1.10621501125022,1.21637060255316,0.195801157462741,0,0.206768026122887,0.647142602455851,0.213455115606889,2.72814814301633,1.66435439510497,1.5119514666484,0,0.61384789315225,0.280660094433074,0.384417447767103,0.511707249066704,0.64341568457443,1.48418066444991,2.15893571323718,0.887808626565635,1.23190734020714,1.03850885836724,0.581051892299796,3.2632051389738,1.80455823272956,2.94659164594868,2.06666006696292,0.910455840033585,0.131124414959424,1.35359883872224,0.847168708148562,0.784349769176855,0,0.73886140225013,1.13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| ||
|short_description=p3@RPS4X | |short_description=p3@RPS4X | ||
}} | }} |
Latest revision as of 08:24, 16 September 2015
Short description: | p3@RPS4X |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPS4X_5end |
Coexpression cluster: | C1162_embryonic_iPS_Keratinocyte_giant_teratocarcinoma_acute_chronic |
Association with transcript: | 0bp_to_ENST00000316084_5end |
EntrezGene: | RPS4X |
HGNC: | 10424 |
UniProt: | P62701 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.31e-19 | 253 |
embryonic cell | 3.48e-10 | 250 |
endo-epithelial cell | 2.77e-08 | 42 |
squamous epithelial cell | 1.61e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.61e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.69e-14 | 235 |
disease of cellular proliferation | 3.54e-14 | 239 |
carcinoma | 1.54e-11 | 106 |
cell type cancer | 1.35e-10 | 143 |