FFCP PHASE1:Hg19::chr4:157892250..157892283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56034 | |EntrezGene=56034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8801 | |HGNC=8801 | ||
|TSSclassifier=strong | |||
|UniProt=B4DU34 | |UniProt=B4DU34 | ||
|association_with_transcript=-22bp_to_ENST00000541126_5end | |association_with_transcript=-22bp_to_ENST00000541126_5end | ||
|cluster_id=chr4:157892250..157892283,- | |||
|description=CAGE_peak_4_at_PDGFC_5end | |description=CAGE_peak_4_at_PDGFC_5end | ||
|id=chr4:157892250..157892283,- | |id=chr4:157892250..157892283,- | ||
|ontology_enrichment_celltype=CL:0000055!2.33e-19!180;CL:0000680!6.53e-10!57;CL:0000056!6.53e-10!57;CL:0000355!6.53e-10!57;CL:0000057!1.29e-09!75;CL:0000187!1.85e-08!54;CL:0000183!7.62e-08!59;CL:0000393!1.81e-07!60;CL:0000211!1.81e-07!60;CL:0000192!1.81e-07!42;CL:0000514!1.81e-07!42 | |ontology_enrichment_celltype=CL:0000055!2.33e-19!180;CL:0000680!6.53e-10!57;CL:0000056!6.53e-10!57;CL:0000355!6.53e-10!57;CL:0000057!1.29e-09!75;CL:0000187!1.85e-08!54;CL:0000183!7.62e-08!59;CL:0000393!1.81e-07!60;CL:0000211!1.81e-07!60;CL:0000192!1.81e-07!42;CL:0000514!1.81e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.10e-08,76;CL:0000680,2.31e-07,58;CL:0000056,2.31e-07,58;CL:0000355,2.31e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.18e-12!143;UBERON:0000475!3.43e-12!365;UBERON:0000914!8.54e-11!83;UBERON:0002329!8.54e-11!83;UBERON:0003077!8.54e-11!83;UBERON:0003059!8.54e-11!83;UBERON:0007282!8.54e-11!83;UBERON:0009618!8.54e-11!83;UBERON:0007285!8.54e-11!83;UBERON:0002385!1.45e-09!63;UBERON:0001015!1.45e-09!63;UBERON:0000383!1.45e-09!63;UBERON:0000481!3.01e-09!347;UBERON:0001134!3.57e-09!61;UBERON:0002036!3.57e-09!61;UBERON:0003082!3.57e-09!61;UBERON:0004290!6.41e-09!70;UBERON:0002100!1.61e-08!216;UBERON:0003102!2.85e-07!95;UBERON:0000468!4.33e-07!659;UBERON:0003104!5.69e-07!238;UBERON:0009142!5.69e-07!238;UBERON:0000490!7.44e-07!138 | |ontology_enrichment_uberon=UBERON:0005256!3.18e-12!143;UBERON:0000475!3.43e-12!365;UBERON:0000914!8.54e-11!83;UBERON:0002329!8.54e-11!83;UBERON:0003077!8.54e-11!83;UBERON:0003059!8.54e-11!83;UBERON:0007282!8.54e-11!83;UBERON:0009618!8.54e-11!83;UBERON:0007285!8.54e-11!83;UBERON:0002385!1.45e-09!63;UBERON:0001015!1.45e-09!63;UBERON:0000383!1.45e-09!63;UBERON:0000481!3.01e-09!347;UBERON:0001134!3.57e-09!61;UBERON:0002036!3.57e-09!61;UBERON:0003082!3.57e-09!61;UBERON:0004290!6.41e-09!70;UBERON:0002100!1.61e-08!216;UBERON:0003102!2.85e-07!95;UBERON:0000468!4.33e-07!659;UBERON:0003104!5.69e-07!238;UBERON:0009142!5.69e-07!238;UBERON:0000490!7.44e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.88e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.13e-07,11 | |||
|phase1_expression=2.18014055124668,0.856402095563933,1.26858963686374,0,0,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,1.31064823278103,0.527533956456907,0.37129905888014,0,0.672325146451775,0,1.46062018077475,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0.684372125364421,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,3.35873211359887,1.29557466407592,2.83333124397605,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,2.1686349143074,0,1.01392563272577,7.95285947051099,4.37971383272372,5.2939497611878,6.20842312895179,5.88493064143945,0.785874452986276,0,0,0.649094787309367,0.522389211897802,0.398873881556595,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0.993943903390637,1.8994576749687,1.58891016975863,0.286836620748814,1.06400514659507,0.560677600142307,1.06748995729705,4.19334832309172,0.311211035399766,0.808264032418128,0.163461903113459,0,1.15235184896,0,1.24864030732128,0,0.149448680551801,0.587172493218824,0.323745888736263,0,1.42907919878425,0.859840221182376,0.619954687054593,0,0.494533858557114,0,0.718618141816238,2.35670559535693,1.50142223846357,1.93944880838928,2.19488810440419,1.5324389789951,0.901428353439581,0.907457465280168,0.717558542755448,1.92201649936711,1.05965950579781,4.80145753735044,0.92747276314595,1.03056216018252,2.23340227597908,9.78902726999344,1.07180705677318,1.51460264546469,1.74894807420369,0,3.19508633264953,3.62707553619505,1.3564847384839,0.386521706326594,0.272746120590835,0,0,0,0.116193942869518,0,0,0,4.69348596989448,1.28648187638577,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,1.71567810298526,0.658501712451753,0,0.301586917234893,1.11106134190236,0.325808305310325,0,1.44331342025273,0.463721619900307,3.17003474436719,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0.93733833986777,0.16798212819886,0.141775097242386,0.985143749731331,0.290633938513962,0.766765358330422,0,0,0,0.288239906833923,0,0,0,0,0,0.308482478109971,0,0,0,0,0.5867062865676,2.71470603091333,0,1.690605505112,6.64845291462176,1.04007436911366,0.257207374262142,0,0.266422179016099,1.85871391755592,0,0,0.65147236858747,3.55391948742546,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0.502257091432126,0,0.239624855491583,0,4.27910715122155,5.79125226670317,2.26023954805422,9.13210912523467,0,0,0,0,1.52456774533478,2.60279707715243,0.773288812777695,1.00509759200609,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0.713715955188647,0,1.28855556491985,1.20378439891088,0,1.03473071292505,2.65690239414175,5.53107505625109,2.17209036170207,0,0.343143423810856,0,0,0,0,0,0,1.24053903909388,4.45039722535381,1.68396056659844,0.384417447767103,0,1.60853921143608,0,2.46735510084249,2.13074070375753,2.13530605635904,1.55776328755086,0.697262270759755,0.966875596732978,1.00253235151642,0.736647911487171,2.18147451512753,3.45973219212762,2.09799063935079,0.902399225814824,2.00239876471478,0,0,2.21658420675039,0,0,0.647747748306418,0,0.812839312631559,0.501689773854853,0.764628819135115,0,1.11937377361089,0,0,4.10320200186223,0.328014645699706,1.95227036798582,0.618246069886334,3.38807019827871,3.4653989966647,0.574265537996172,0,0,1.7400729292582,0.462145851343933,0.15350367472613,0.551346289938122,0.751941714077915,0.870100163485371,1.19317278382541,1.06838442776085,0.661139661443912,0.768760269460425,2.04180339991335,1.71968227454435,0.929691098594572,1.5740617341532,1.3940745403212,1.54016790088044,0,2.60979897622522,1.29726953372744,0.572499546967965,0,1.58189712359363,1.5250415513906,0.767693373934002,0.42793898803392,0,0,4.8565563547495,2.74537029736055,4.3590588867904,0.606547444719948,1.58510321173008,0,1.46290121726877,0.731140468893853,1.05650146756755,1.22849920267187,1.55545975149084,1.13008116620243,1.10273068709225,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0.608731130888112,1.8589409885985,0.845086807596724,1.72093622644862,1.08073945114433,0.7133421029625,4.25713276884717,0,0,0.379473173765715,0,0.865999014529609,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0.159426272728822,0.399158742865633,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,1.45632626099416,0,0,0.23874448473769,0.890894042497916,0,0,0.281338832821026,1.44701316529778,0,0,1.19548792950642,0.828851746593443,0,1.43176155503017,0,0.622079175323615,1.3480252672099,0.179021174675609,0,0.690503839458535,0,0,0,0.278304294485554,1.99613798001194,0,0.174919999992391,0.724999575434793,2.73104275885199,2.2882828526349,0,0,1.45802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| ||
|short_description=p4@PDGFC | |short_description=p4@PDGFC | ||
}} | }} |
Latest revision as of 09:18, 16 September 2015
Short description: | p4@PDGFC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDGFC_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000541126_5end |
EntrezGene: | PDGFC |
HGNC: | 8801 |
UniProt: | B4DU34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.10e-08 | 76 |
muscle precursor cell | 2.31e-07 | 58 |
myoblast | 2.31e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.31e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 1.13e-07 | 11 |