FFCP PHASE1:Hg19::chr17:56315998..56316003,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4025 | |EntrezGene=4025 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6678 | |HGNC=6678 | ||
|TSSclassifier=strong | |||
|UniProt=F5H386 | |UniProt=F5H386 | ||
|association_with_transcript=46bp_to_ENST00000543544_5end | |association_with_transcript=46bp_to_ENST00000543544_5end | ||
|cluster_id=chr17:56315998..56316003,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_4_at_LPO_5end | |description=CAGE_peak_4_at_LPO_5end | ||
|id=chr17:56315998..56316003,+ | |id=chr17:56315998..56316003,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.58e-34;1!UBERON:0006298;3.61e-34;1!UBERON:0006965;1.27e-17;2 | |||
|ontology_enrichment_disease=DOID:178!1.10e-13!1;DOID:326!1.10e-13!1;DOID:3978!1.10e-13!1;DOID:3394!1.10e-13!1;DOID:5844!1.10e-13!1;DOID:114!1.75e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.67e-26!2;UBERON:0003127!4.08e-26!2;UBERON:0001044!8.04e-20!6;UBERON:0003293!8.04e-20!6;UBERON:0003294!8.04e-20!6;UBERON:0010047!8.04e-20!6;UBERON:0000167!8.04e-20!6;UBERON:0000078!1.60e-17!18;UBERON:0000166!5.10e-15!21;UBERON:0001831!3.50e-14!1;UBERON:0001567!3.50e-14!1;UBERON:0008801!3.50e-14!1;UBERON:0001736!3.98e-14!1;UBERON:0006298!3.98e-14!1;UBERON:0002372!9.73e-14!1;UBERON:0001961!9.73e-14!1;UBERON:0001744!9.73e-14!1;UBERON:0001735!9.73e-14!1;UBERON:0003408!3.85e-12!10;UBERON:0000165!2.96e-11!28;UBERON:0000930!2.96e-11!28;UBERON:0001004!2.36e-10!72;UBERON:0007023!1.06e-09!115;UBERON:0000161!5.48e-09!35;UBERON:0003126!3.84e-08!7;UBERON:0001005!3.84e-08!7;UBERON:0004089!9.87e-08!2;UBERON:0000341!1.12e-07!2;UBERON:0001041!2.23e-07!98 | |ontology_enrichment_uberon=UBERON:0001829!1.67e-26!2;UBERON:0003127!4.08e-26!2;UBERON:0001044!8.04e-20!6;UBERON:0003293!8.04e-20!6;UBERON:0003294!8.04e-20!6;UBERON:0010047!8.04e-20!6;UBERON:0000167!8.04e-20!6;UBERON:0000078!1.60e-17!18;UBERON:0000166!5.10e-15!21;UBERON:0001831!3.50e-14!1;UBERON:0001567!3.50e-14!1;UBERON:0008801!3.50e-14!1;UBERON:0001736!3.98e-14!1;UBERON:0006298!3.98e-14!1;UBERON:0002372!9.73e-14!1;UBERON:0001961!9.73e-14!1;UBERON:0001744!9.73e-14!1;UBERON:0001735!9.73e-14!1;UBERON:0003408!3.85e-12!10;UBERON:0000165!2.96e-11!28;UBERON:0000930!2.96e-11!28;UBERON:0001004!2.36e-10!72;UBERON:0007023!1.06e-09!115;UBERON:0000161!5.48e-09!35;UBERON:0003126!3.84e-08!7;UBERON:0001005!3.84e-08!7;UBERON:0004089!9.87e-08!2;UBERON:0000341!1.12e-07!2;UBERON:0001041!2.23e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.45e-66;2!UBERON:0001044;3.84e-50;6!UBERON:0003293;3.84e-50;6!UBERON:0003294;3.84e-50;6!UBERON:0010047;3.84e-50;6!UBERON:0003408;3.84e-50;6!UBERON:0000167;3.84e-50;6!UBERON:0001831;2.58e-34;1!UBERON:0001567;2.58e-34;1!UBERON:0001736;3.61e-34;1!UBERON:0001041;4.67e-22;14!UBERON:0004089;6.48e-18;2!UBERON:0000341;9.07e-18;2!UBERON:0003127;1.07e-17;2!UBERON:0000161;1.75e-16;19!UBERON:0000166;1.75e-16;19!UBERON:0000165;1.92e-11;28!UBERON:0002365;3.39e-10;31!UBERON:0002330;3.39e-10;31!UBERON:0004921;1.35e-08;33!UBERON:0007811;1.45e-08;52!UBERON:0000153;2.92e-08;54!UBERON:0000974;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.45e-66,2;UBERON:0001044,3.84e-50,6;UBERON:0003293,3.84e-50,6;UBERON:0003294,3.84e-50,6;UBERON:0010047,3.84e-50,6;UBERON:0000167,3.84e-50,6;UBERON:0001831,2.58e-34,1;UBERON:0001567,2.58e-34,1;UBERON:0008801,2.58e-34,1;UBERON:0001736,3.61e-34,1;UBERON:0006298,3.61e-34,1;UBERON:0003408,1.68e-30,10;UBERON:0004089,6.48e-18,2;UBERON:0000341,9.07e-18,2;UBERON:0003127,1.07e-17,2;UBERON:0000166,2.38e-14,22;UBERON:0000165,4.48e-11,29;UBERON:0000930,4.48e-11,29;UBERON:0007023,7.60e-11,114;UBERON:0002365,2.08e-10,31;UBERON:0002330,2.08e-10,31;UBERON:0000153,3.98e-09,62;UBERON:0007811,3.98e-09,62;UBERON:0000161,4.60e-09,36;UBERON:0001004,1.02e-07,74;UBERON:0001444,7.75e-07,49 | |||
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|short_description=p4@LPO | |short_description=p4@LPO | ||
}} | }} |
Latest revision as of 10:11, 16 September 2015
Short description: | p4@LPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LPO_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 46bp_to_ENST00000543544_5end |
EntrezGene: | LPO |
HGNC: | 6678 |
UniProt: | F5H386 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.45e-66 | 2 |
saliva-secreting gland | 3.84e-50 | 6 |
gland of oral region | 3.84e-50 | 6 |
gland of foregut | 3.84e-50 | 6 |
oral gland | 3.84e-50 | 6 |
oral cavity | 3.84e-50 | 6 |
parotid gland | 2.58e-34 | 1 |
cheek | 2.58e-34 | 1 |
parotid gland primordium | 2.58e-34 | 1 |
submandibular gland | 3.61e-34 | 1 |
submandibular gland primordium | 3.61e-34 | 1 |
gland of gut | 1.68e-30 | 10 |
midface | 6.48e-18 | 2 |
throat | 9.07e-18 | 2 |
open tracheal system trachea | 1.07e-17 | 2 |
oral opening | 2.38e-14 | 22 |
mouth | 4.48e-11 | 29 |
stomodeum | 4.48e-11 | 29 |
adult organism | 7.60e-11 | 114 |
exocrine gland | 2.08e-10 | 31 |
exocrine system | 2.08e-10 | 31 |
anterior region of body | 3.98e-09 | 62 |
craniocervical region | 3.98e-09 | 62 |
orifice | 4.60e-09 | 36 |
respiratory system | 1.02e-07 | 74 |
subdivision of head | 7.75e-07 | 49 |