FFCP PHASE1:Hg19::chr7:134618090..134618112,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_BX648808_5end | |association_with_transcript=21bp_to_BX648808_5end | ||
|cluster_id=chr7:134618090..134618112,+ | |||
|coexpression_cluster_id=C320 | |coexpression_cluster_id=C320 | ||
|description=CAGE_peak_16_at_CALD1_5end | |description=CAGE_peak_16_at_CALD1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!3.84e-11!180;CL:0000057!1.78e-08!75 | |ontology_enrichment_celltype=CL:0000055!3.84e-11!180;CL:0000057!1.78e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.36e-07;23 | |ontology_enrichment_celltype_v019=CL:0002620;5.36e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.56e-07,76;CL:0002620,6.17e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;4.70e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;4.70e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.78e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.59e-11!365;UBERON:0000468!1.08e-10!659;UBERON:0007023!2.49e-09!115;UBERON:0000467!1.91e-08!625;UBERON:0000480!2.88e-08!626;UBERON:0000477!2.96e-08!286;UBERON:0003102!3.90e-08!95;UBERON:0000481!1.21e-07!347;UBERON:0000062!1.32e-07!511;UBERON:0005156!1.65e-07!59;UBERON:0000990!1.65e-07!59 | |ontology_enrichment_uberon=UBERON:0000475!1.59e-11!365;UBERON:0000468!1.08e-10!659;UBERON:0007023!2.49e-09!115;UBERON:0000467!1.91e-08!625;UBERON:0000480!2.88e-08!626;UBERON:0000477!2.96e-08!286;UBERON:0003102!3.90e-08!95;UBERON:0000481!1.21e-07!347;UBERON:0000062!1.32e-07!511;UBERON:0005156!1.65e-07!59;UBERON:0000990!1.65e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.63e-07;9!UBERON:0000042;2.63e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0004457;2.63e-07;9!UBERON:0000042;2.63e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.52e-07,114;UBERON:0005156,6.34e-07,59;UBERON:0000990,6.34e-07,59 | |||
|phase1_expression=3.27021082687002,7.49351833618441,4.22863212287913,9.00659685178174,4.02264984984559,4.36169262050184,0,0.631719873426831,0,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,8.0679017574213,6.02694528023977,5.11217063271161,3.41552959153355,0,0.408001382488506,0.313454721478088,1.14494394852423,1.23186982565596,3.38965126905968,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,1.59331170856906,0,0.486634870302636,1.60709189178915,3.54767035940102,3.95256535619067,0.654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0.71153252537342,1.33888245105868,0,0,0.976248230192678,0,1.62028389576352,0.625098097988558,0.898117490504679,0.450445921933289,0,0,0.366403487860815,0,0,0.436094052142534,12.9212707440783,1.01304409331664,7.41491412554025,4.01571269048339,2.4826786753885,0.560677600142307,0,2.22000793575444,0.311211035399766,0.269421344139376,0.980771418680752,0.151357427644931,2.88087962239999,0.234321431833797,0.936480230490962,0,1.19558944441441,0.352303495931295,0.161872944368132,0.421352420106746,0.816616685019573,2.08818339430006,0.309977343527296,0,5.43987244412825,0,0,0.841680569770331,0.500474079487857,0.554128230968366,0.877955241761676,5.21029252858333,3.90618953157152,0.453728732640084,9.32826105582082,3.20336083227851,3.81477422087211,1.50045548042201,1.33968288009971,9.27505944164265,4.46680455195816,5.90717162844432,1.16924406193438,4.54380793639406,1.01254888506529,1.61646056818812,8.87523981291536,2.61955455391865,2.7129694769678,0.386521706326594,0.545492241181669,1.43402297694502,0.731842236777572,0,0.348581828608555,0.518305275076852,0.504641701751257,0.72995471815166,1.56449532329816,20.5837100221723,0,3.71494342425583,2.16563844500876,0.591534000199219,0.505754070234305,0.723033089650446,0.882351781859152,1.08939722046203,1.42362371466658,0.808987848960987,0.196221465125346,1.15424147083917,0,0,0.8231480226628,0,7.60530208930985,0.982827216677626,3.54473944008842,0,0,1.02940686179115,0.658501712451753,0,0.904760751704678,0.648119116109707,0,0,0,0.463721619900307,1.52631302506568,0,0.925971025153221,2.85381228351897,0,0,0,0,0,0,4.36753533317035,0.708875486211932,0.447792613514241,0.581267877027924,0.383382679165211,0,0,0,0,0,0.444485260045183,0.763976851116555,0,1.71072446022705,0.205654985406647,0.901029173531752,0.857479297891735,0.112131084345361,0.43596006883328,0.36669142910475,1.68053230485111,0,1.690605505112,12.233153362904,7.28052058379563,0,0,0.266422179016099,1.00084595560703,0,0,0.325736184293735,0,0,0.904318131178758,0,6.39827143565165,0,0,0,1.91699884393266,2.29723871668228,0,1.01346914667305,1.2328579353023,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0.271265023699736,13.7260768610333,16.0586089917446,7.7274183366628,6.91134348457008,0.601892199455438,0,1.03473071292505,4.64957918974806,0.921845842708516,1.04260337361699,0,0.686286847621712,0,0,0,0,3.32870879020994,0.604780586659361,1.73675465473144,12.8908057561972,6.45518217196069,3.97231362692673,3.58195074346692,11.0989205589089,0,1.07946785661859,1.24293207719189,0.9033987161519,1.03850885836724,0.929683027679674,1.0877350463246,1.80455823272956,1.56537681191024,0.68888668898764,1.82091168006717,2.22911505431021,0,0.231046011313244,0,0,0.211103257785751,0,0,1.29549549661284,0,0.541892875087706,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,1.95777922130672,1.46511143709349,0.495056999523528,0.574265537996172,0.650060246036521,1.6068392984416,0.676695028044854,0.462145851343933,1.38153307253517,0.689182862422653,1.6113036730241,2.75531718437034,0.93749290157711,0.623224249527161,0.495854746082934,0.768760269460425,2.4246415373971,0.809262246844399,2.78907329578371,5.66662224295152,0,0.616067160352178,0,0,1.11194531462352,0.715624433709956,1.116475108079,3.16379424718726,3.0500831027812,0,0,0.318203247925937,0.78494864019923,0.719489830333259,0.823611089208164,0.824686816419805,0.202182481573316,0,0.842516912477962,0,1.21856744815642,0,1.77449884830381,5.09059555033366,0,0.551365343546124,0.66343897524122,0.876901770507525,0.578775534266688,0.655894752046633,0.811641507850816,0.30982349809975,0.281695602532241,0.430234056612155,1.27723753317057,1.07001315444375,0.354761064070598,1.68886108238131,1.31717957183961,0,0,0,0.670302275535787,0,1.88287601553558,0,0,0,0.459446800413919,0,0.764637207142375,0,0,0,0.648473311192717,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0.121360521749513,0,0.284136146806413,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,1.40669416410513,0.556543525114529,0,0.211125408127993,16.7368310130899,1.38141957765574,0.251932747854276,1.1249555075237,0,11.5084647434869,0.449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| ||
|short_description=p16@CALD1 | |short_description=p16@CALD1 | ||
}} | }} |
Latest revision as of 12:04, 16 September 2015
Short description: | p16@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CALD1_5end |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | 21bp_to_BX648808_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.56e-07 | 76 |
skin fibroblast | 6.17e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.52e-07 | 114 |
reproductive structure | 6.34e-07 | 59 |
reproductive system | 6.34e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.78e-07 | 14 |