FFCP PHASE1:Hg19::chr7:134653919..134653969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-295bp_to_AJ223812_5end | |association_with_transcript=-295bp_to_AJ223812_5end | ||
|cluster_id=chr7:134653919..134653969,+ | |||
|coexpression_cluster_id=C320 | |coexpression_cluster_id=C320 | ||
|description=CAGE_peak_30_at_CALD1_5end | |description=CAGE_peak_30_at_CALD1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!9.70e-19!180;CL:0000057!1.43e-12!75;CL:0002620!1.92e-07!23;CL:0002334!2.58e-07!12 | |ontology_enrichment_celltype=CL:0000055!9.70e-19!180;CL:0000057!1.43e-12!75;CL:0002620!1.92e-07!23;CL:0002334!2.58e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;9.07e-09;12!CL:0000134;1.22e-08;55!CL:0002620;7.27e-08;23!CL:0000048;1.65e-07;58!CL:0002579;6.48e-07;3!CL:0002615;7.33e-07;3 | |ontology_enrichment_celltype_v019=CL:0002334;9.07e-09;12!CL:0000134;1.22e-08;55!CL:0002620;7.27e-08;23!CL:0000048;1.65e-07;58!CL:0002579;6.48e-07;3!CL:0002615;7.33e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.51e-14,76;CL:0002334,1.08e-08,12;CL:0002620,8.91e-08,23;CL:0002579,6.86e-07,3;CL:0002615,7.97e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;5.43e-10;14 | |ontology_enrichment_disease_v019=DOID:2394;5.43e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,7.64e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.08e-08!659;UBERON:0005256!2.61e-08!143;UBERON:0000914!5.86e-08!83;UBERON:0002329!5.86e-08!83;UBERON:0003077!5.86e-08!83;UBERON:0003059!5.86e-08!83;UBERON:0007282!5.86e-08!83;UBERON:0009618!5.86e-08!83;UBERON:0007285!5.86e-08!83;UBERON:0000475!8.39e-07!365 | |ontology_enrichment_uberon=UBERON:0000468!1.08e-08!659;UBERON:0005256!2.61e-08!143;UBERON:0000914!5.86e-08!83;UBERON:0002329!5.86e-08!83;UBERON:0003077!5.86e-08!83;UBERON:0003059!5.86e-08!83;UBERON:0007282!5.86e-08!83;UBERON:0009618!5.86e-08!83;UBERON:0007285!5.86e-08!83;UBERON:0000475!8.39e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.94e-12;6!UBERON:0002358;3.94e-12;6!UBERON:0003684;3.94e-12;6!UBERON:0001178;3.94e-12;6!UBERON:0004457;1.02e-07;9!UBERON:0000042;1.02e-07;9!UBERON:0005904;4.85e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0003688;3.94e-12;6!UBERON:0002358;3.94e-12;6!UBERON:0003684;3.94e-12;6!UBERON:0001178;3.94e-12;6!UBERON:0004457;1.02e-07;9!UBERON:0000042;1.02e-07;9!UBERON:0005904;4.85e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.52e-12,6;UBERON:0002358,4.52e-12,6;UBERON:0003684,4.52e-12,6;UBERON:0001178,4.52e-12,6;UBERON:0005904,3.33e-07,4 | |||
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| ||
|short_description=p30@CALD1 | |short_description=p30@CALD1 | ||
}} | }} |
Latest revision as of 12:38, 16 September 2015
Short description: | p30@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_CALD1_5end |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | -295bp_to_AJ223812_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.51e-14 | 76 |
preadipocyte | 1.08e-08 | 12 |
skin fibroblast | 8.91e-08 | 23 |
omentum preadipocyte | 6.86e-07 | 3 |
adipocyte of omentum tissue | 7.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.52e-12 | 6 |
peritoneum | 4.52e-12 | 6 |
abdominal cavity | 4.52e-12 | 6 |
visceral peritoneum | 4.52e-12 | 6 |
duct of male reproductive system | 3.33e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.64e-10 | 14 |