FFCP PHASE1:Hg19::chr10:118031691..118031706,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:118031691..118031706,- to FFCP PHASE1:Hg19::chr10:118031691..118031706,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2674 | |EntrezGene=2674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4243 | |HGNC=4243 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=87bp_to_ENST00000369236_5end | |||
|cluster_id=chr10:118031691..118031706,- | |||
|coexpression_cluster_id=C1565 | |||
|description=CAGE_peak_5_at_GFRA1_5end | |||
|id=chr10:118031691..118031706,- | |||
|ontology_enrichment_celltype=CL:0002620!2.48e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.13e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.95e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.91e-07;5!DOID:450;1.91e-07;5!DOID:66;1.91e-07;5!DOID:423;1.91e-07;5!DOID:0080000;1.91e-07;5!DOID:11722;1.91e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.56e-07,5;DOID:450,3.56e-07,5;DOID:66,3.56e-07,5;DOID:423,3.56e-07,5;DOID:0080000,3.56e-07,5;DOID:11722,3.56e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.44e-14!115;UBERON:0000475!2.01e-12!365;UBERON:0000481!1.44e-07!347;UBERON:0003075!3.71e-07!86;UBERON:0007284!3.71e-07!86;UBERON:0000153!3.74e-07!129;UBERON:0007811!3.74e-07!129;UBERON:0003056!5.74e-07!61;UBERON:0000468!6.93e-07!659;UBERON:0000033!7.64e-07!123 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,8.34e-07,41 | |||
|phase1_expression=0.726713517082227,1.49870366723688,0.563817616383885,0,0,0,0,0,1.56711376919903,0,0.697801167972428,0,0,0.247532705920093,0.331397375727916,0,0,0,0,1.10808952269109,1.02000345622126,0.626909442956176,0.572471974262113,2.05311637609326,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,3.97583067623023,1.00267582127178,1.88300474649071,0,0,2.26883561193763,2.88248216701333,0.966182642624386,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61131726843659,0,0.976248230192678,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,1.68203280042692,0,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0.323745888736263,0.421352420106746,0,0,0,1.18800285728205,0.494533858557114,0,0,0,0.125118519871964,0,0,0.919463387397059,0.45071417671979,0.113432183160021,2.33206526395521,2.13557388818567,2.96704661623387,1.20036438433761,1.13357782162283,1.28820270022815,4.28068769562657,1.18143432568886,0.194874010322397,3.28163906517349,4.05019554026117,3.39456719319505,4.61512470271599,3.22406714328449,0.67824236924195,0,0,0,0,0.265059536642971,0,0.725627385107593,0,0,6.25798129319264,3.21620469096443,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,3.80265104465493,6.87979051674338,1.18157981336281,0,0,4.11762744716461,0,0,0,0,0.325808305310325,0,2.88662684050547,1.15930404975077,0.587043471179108,2.30986316417718,1.38895653772983,1.71228737011138,19.7551099489819,19.7451817281821,0,0,0,0,0,0,0,0,0,0.492663237895943,1.49682337822484,0,0.144119953416961,0.50496973370552,0.698476837213859,7.63976851116555,2.34434894420094,0,0.308482478109971,0,0,0,0.43596006883328,0.07333828582095,1.55126058909333,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,1.67737398844108,1.14861935834114,0,1.15825045334063,0.61642896765115,3.58121926479791,0,0,0,0,0,0,2.31986643833309,0.335032530668698,0,0,0,0,0.736148950314839,0,0,2.9115920614313,8.3861624734666,6.62350143142526,0.702848489956279,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.512556597022804,0.511707249066704,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0,0,2.64073230778596,0.182091168006717,1.04899531967539,0,0.0770153371044148,0.784349769176855,2.92278449306521,0.105551628892876,0,0,1.51141141271498,1.54227252690289,1.62567862526312,1.50506932156456,0,0,2.46262230194396,0,0,0.512900250232778,0,0,1.44257416306811,0,0,0,0,3.21367859688319,0.48335359146061,0,0.921022048356777,0.413509717453592,0.751941714077915,0.145016693914229,0.596586391912706,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,1.14378116354295,0.511795582622668,0,0,0,0.719489830333259,0.274537029736055,0.353437207037059,0,0,0,6.82687234725426,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,11.3998123060739,8.56166721695745,0,0.349934720244983,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15334352941955,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.597743964753209,1.65770349318689,0,1.53403023753232,0,1.86623752597084,0,0,0,1.87422470710174,0,8.89095921157095,0,0.463840490809256,0,6.2502662660456,0,2.89999830173917,0,0,0,0,0,0,1.77148277162768,0.723578631752448,0,0,0,0,0,0,2.77020930613669,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.85760885457012,1.22206028986725,0.296521128680622,1.35920332841153,3.02823653565821,0,1.60515529459758,0.937057782901357,0,0,0,0.394584402849391,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0.284609546029793,0,0,0,0,4.01871336956669,0,0,0,0,2.32773639572207,0,1.80784592624426,0,0,0.253243183823515,0,0,1.28071796843612,0,0,0,0,0,0,0,0.407712618220842,0.313808538937,0.713987523454252,0,0.600420288709789,0,0,0.429765441419957,0,0.558564802544508,0.458320848023367,0,0.199679000498991,0.429226048136571,1.11585728720936,0.873385142327441,0,0,0,0,0,0.492137407573744,0,0,0.136203406111576,0,0,0,0,0,0.485996453264197,0,0.472834243795189,1.04909176269996,0,0.179287339332845,0,0.714695326373367,3.31045985182716,0,0,0,0,0,0,3.40776043570843,0,1.75862680413699,0,0.129282956361551,0,0,0,0.533937062838473,1.57204305099666,0,0.496166021811951,0,0,0,1.63205341010842,1.0027595760908,1.22538230705385,0.327872630709804,0,0,0.366078794705889,0.250381861413,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0.233713309847224,2.77402930751307,1.7046270474758,4.77979013329893,0,0,0.151230923763239,0,0.73927574994817,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,1.60011105865261,0.343395705182793,0,0,0.192619830407303,0,2.3489486276869,3.17388295717181,1.389134845943,15.6631490884139,0.179088841081487,1.23520578864389,2.19284049578707,0.883445729729405,0,0.844712203265363,1.02496607435179,0,4.55789934266073,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0,0,0.567515953566836,0,0,0,0.383683113910955,0,0,0,0,0,0,0,1.59002175326709,0,0,1.76337971845342,15.31227386766,1.47727217721857,0,0.159633859057151,0.41023272848151,0,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0,0,0.675375846183947,0,0.413373593002368,0.380494861163441,0,0,2.48105589194647,0,0,0.535701835878287,0,0.606965604236632,0.455324382702595,0,0,0,0.271878931907327,0.72350050919134,0,0,2.43328587836593,0.785577949580009,0,2.73947616152849,1.72742072974897,0,0.643288897589907,0,0,0.347716544605159,0,0,0.6828739083758,2.07377898544228,0.860454717640555,0,0,0,0,0,0.955538938977433,0,0,0,0,1.64260490969995,0,4.37139893753226,0.233939463462106,0,0.118920090777569,0,0,0,1.23478652972711,0.874238242015829,0,2.69663153929296,0,0.588925401344836,0,0.8453114551668,0.339854229375634,0.657887425858975,0.45120521581504,0,0,0,0,1.46067277649303,0.458729283404541,0.286679166302903,0,0.407948941145488,0,1.0580536810308,2.23197010900051,2.77305377178851,5.19151874548547,0,0,0,0,0,0,0,1.66713136080127,0.535928260312357,0,0.103432995861895,0.213233981900981,1.42838658878244,0.258355639344024,0.124149428591716,4.59740636580515,0.636471582781649,1.41482032270754,1.08858373948481,3.08009970976753,1.6164492723501,1.00411087549747,3.99192427855216,0,0.960546112899439,0,0,0,1.833621662743,0.406896178315738,3.99454064511308,1.00636896795513,0 | |phase1_expression=0.726713517082227,1.49870366723688,0.563817616383885,0,0,0,0,0,1.56711376919903,0,0.697801167972428,0,0,0.247532705920093,0.331397375727916,0,0,0,0,1.10808952269109,1.02000345622126,0.626909442956176,0.572471974262113,2.05311637609326,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,3.97583067623023,1.00267582127178,1.88300474649071,0,0,2.26883561193763,2.88248216701333,0.966182642624386,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61131726843659,0,0.976248230192678,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,1.68203280042692,0,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0.323745888736263,0.421352420106746,0,0,0,1.18800285728205,0.494533858557114,0,0,0,0.125118519871964,0,0,0.919463387397059,0.45071417671979,0.113432183160021,2.33206526395521,2.13557388818567,2.96704661623387,1.20036438433761,1.13357782162283,1.28820270022815,4.28068769562657,1.18143432568886,0.194874010322397,3.28163906517349,4.05019554026117,3.39456719319505,4.61512470271599,3.22406714328449,0.67824236924195,0,0,0,0,0.265059536642971,0,0.725627385107593,0,0,6.25798129319264,3.21620469096443,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,3.80265104465493,6.87979051674338,1.18157981336281,0,0,4.11762744716461,0,0,0,0,0.325808305310325,0,2.88662684050547,1.15930404975077,0.587043471179108,2.30986316417718,1.38895653772983,1.71228737011138,19.7551099489819,19.7451817281821,0,0,0,0,0,0,0,0,0,0.492663237895943,1.49682337822484,0,0.144119953416961,0.50496973370552,0.698476837213859,7.63976851116555,2.34434894420094,0,0.308482478109971,0,0,0,0.43596006883328,0.07333828582095,1.55126058909333,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,1.67737398844108,1.14861935834114,0,1.15825045334063,0.61642896765115,3.58121926479791,0,0,0,0,0,0,2.31986643833309,0.335032530668698,0,0,0,0,0.736148950314839,0,0,2.9115920614313,8.3861624734666,6.62350143142526,0.702848489956279,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.512556597022804,0.511707249066704,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0,0,2.64073230778596,0.182091168006717,1.04899531967539,0,0.0770153371044148,0.784349769176855,2.92278449306521,0.105551628892876,0,0,1.51141141271498,1.54227252690289,1.62567862526312,1.50506932156456,0,0,2.46262230194396,0,0,0.512900250232778,0,0,1.44257416306811,0,0,0,0,3.21367859688319,0.48335359146061,0,0.921022048356777,0.413509717453592,0.751941714077915,0.145016693914229,0.596586391912706,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,1.14378116354295,0.511795582622668,0,0,0,0.719489830333259,0.274537029736055,0.353437207037059,0,0,0,6.82687234725426,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,11.3998123060739,8.56166721695745,0,0.349934720244983,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15334352941955,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.597743964753209,1.65770349318689,0,1.53403023753232,0,1.86623752597084,0,0,0,1.87422470710174,0,8.89095921157095,0,0.463840490809256,0,6.2502662660456,0,2.89999830173917,0,0,0,0,0,0,1.77148277162768,0.723578631752448,0,0,0,0,0,0,2.77020930613669,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.85760885457012,1.22206028986725,0.296521128680622,1.35920332841153,3.02823653565821,0,1.60515529459758,0.937057782901357,0,0,0,0.394584402849391,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0.284609546029793,0,0,0,0,4.01871336956669,0,0,0,0,2.32773639572207,0,1.80784592624426,0,0,0.253243183823515,0,0,1.28071796843612,0,0,0,0,0,0,0,0.407712618220842,0.313808538937,0.713987523454252,0,0.600420288709789,0,0,0.429765441419957,0,0.558564802544508,0.458320848023367,0,0.199679000498991,0.429226048136571,1.11585728720936,0.873385142327441,0,0,0,0,0,0.492137407573744,0,0,0.136203406111576,0,0,0,0,0,0.485996453264197,0,0.472834243795189,1.04909176269996,0,0.179287339332845,0,0.714695326373367,3.31045985182716,0,0,0,0,0,0,3.40776043570843,0,1.75862680413699,0,0.129282956361551,0,0,0,0.533937062838473,1.57204305099666,0,0.496166021811951,0,0,0,1.63205341010842,1.0027595760908,1.22538230705385,0.327872630709804,0,0,0.366078794705889,0.250381861413,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0.233713309847224,2.77402930751307,1.7046270474758,4.77979013329893,0,0,0.151230923763239,0,0.73927574994817,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,1.60011105865261,0.343395705182793,0,0,0.192619830407303,0,2.3489486276869,3.17388295717181,1.389134845943,15.6631490884139,0.179088841081487,1.23520578864389,2.19284049578707,0.883445729729405,0,0.844712203265363,1.02496607435179,0,4.55789934266073,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0,0,0.567515953566836,0,0,0,0.383683113910955,0,0,0,0,0,0,0,1.59002175326709,0,0,1.76337971845342,15.31227386766,1.47727217721857,0,0.159633859057151,0.41023272848151,0,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0,0,0.675375846183947,0,0.413373593002368,0.380494861163441,0,0,2.48105589194647,0,0,0.535701835878287,0,0.606965604236632,0.455324382702595,0,0,0,0.271878931907327,0.72350050919134,0,0,2.43328587836593,0.785577949580009,0,2.73947616152849,1.72742072974897,0,0.643288897589907,0,0,0.347716544605159,0,0,0.6828739083758,2.07377898544228,0.860454717640555,0,0,0,0,0,0.955538938977433,0,0,0,0,1.64260490969995,0,4.37139893753226,0.233939463462106,0,0.118920090777569,0,0,0,1.23478652972711,0.874238242015829,0,2.69663153929296,0,0.588925401344836,0,0.8453114551668,0.339854229375634,0.657887425858975,0.45120521581504,0,0,0,0,1.46067277649303,0.458729283404541,0.286679166302903,0,0.407948941145488,0,1.0580536810308,2.23197010900051,2.77305377178851,5.19151874548547,0,0,0,0,0,0,0,1.66713136080127,0.535928260312357,0,0.103432995861895,0.213233981900981,1.42838658878244,0.258355639344024,0.124149428591716,4.59740636580515,0.636471582781649,1.41482032270754,1.08858373948481,3.08009970976753,1.6164492723501,1.00411087549747,3.99192427855216,0,0.960546112899439,0,0,0,1.833621662743,0.406896178315738,3.99454064511308,1.00636896795513,0 | ||
|short_description=p5@GFRA1 | |||
}} | }} |
Latest revision as of 13:46, 16 September 2015
Short description: | p5@GFRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GFRA1_5end |
Coexpression cluster: | C1565_MCF7_normal_mesothelioma_Smooth_breast_thyroid_bone |
Association with transcript: | 87bp_to_ENST00000369236_5end |
EntrezGene: | GFRA1 |
HGNC: | 4243 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.95e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
skin of body | 8.34e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.56e-07 | 5 |
myotonic disease | 3.56e-07 | 5 |
muscle tissue disease | 3.56e-07 | 5 |
myopathy | 3.56e-07 | 5 |
muscular disease | 3.56e-07 | 5 |
myotonic dystrophy | 3.56e-07 | 5 |