FFCP PHASE1:Hg19::chr2:115918927..115918946,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389023 | |EntrezGene=389023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000432658,NR_036580,uc002tld.2_5end | |association_with_transcript=-7bp_to_ENST00000432658,NR_036580,uc002tld.2_5end | ||
|cluster_id=chr2:115918927..115918946,- | |||
|coexpression_cluster_id=C2657 | |||
|description=CAGE_peak_2_at_LOC389023_5end | |description=CAGE_peak_2_at_LOC389023_5end | ||
|id=chr2:115918927..115918946,- | |id=chr2:115918927..115918946,- | ||
|ontology_enrichment_celltype=CL:0002322!3.53e-07!5 | |ontology_enrichment_celltype=CL:0002322!3.53e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.60e-09;1!CL:0000167;2.93e-09;1!CL:0000164;2.93e-09;1!CL:0000502;2.93e-09;1!CL:0000172;2.93e-09;1!CL:0000173;2.93e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.60e-09,1;CL:0000167,3.31e-09,1;CL:0000164,3.31e-09,1;CL:0000502,3.31e-09,1;CL:0000172,3.31e-09,1;CL:0000173,3.31e-09,1;CL:0002351,3.31e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.93e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:225;2.40e-09;1!DOID:4430;2.93e-09;1!DOID:9119;6.46e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:225,2.40e-09,1;DOID:4430,3.31e-09,1;DOID:9119,7.27e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!8.91e-33!22;UBERON:0001950!1.17e-32!20;UBERON:0001049!5.43e-30!57;UBERON:0005068!5.43e-30!57;UBERON:0006241!5.43e-30!57;UBERON:0007135!5.43e-30!57;UBERON:0001017!1.43e-29!82;UBERON:0001893!1.48e-29!34;UBERON:0002020!1.81e-29!34;UBERON:0003528!1.81e-29!34;UBERON:0001869!4.27e-29!32;UBERON:0000956!2.36e-28!25;UBERON:0000203!2.36e-28!25;UBERON:0002791!7.62e-28!33;UBERON:0005743!9.83e-28!86;UBERON:0000955!1.15e-26!69;UBERON:0006238!1.15e-26!69;UBERON:0002616!1.50e-26!59;UBERON:0000073!3.67e-24!94;UBERON:0001016!3.67e-24!94;UBERON:0002780!1.63e-23!41;UBERON:0001890!1.63e-23!41;UBERON:0006240!1.63e-23!41;UBERON:0003080!8.20e-23!42;UBERON:0003075!5.21e-20!86;UBERON:0007284!5.21e-20!86;UBERON:0002346!9.98e-19!90;UBERON:0003056!1.77e-15!61;UBERON:0007023!7.48e-14!115;UBERON:0000200!7.73e-14!6;UBERON:0000033!3.66e-12!123;UBERON:0000153!4.74e-12!129;UBERON:0007811!4.74e-12!129;UBERON:0002021!4.80e-12!5;UBERON:0001871!3.96e-10!7;UBERON:0004121!4.31e-10!169;UBERON:0000924!1.20e-09!173;UBERON:0006601!1.20e-09!173;UBERON:0000025!3.50e-09!194;UBERON:0003076!2.72e-08!15;UBERON:0003057!2.72e-08!15;UBERON:0002680!3.00e-08!9;UBERON:0001895!3.00e-08!9;UBERON:0010092!3.00e-08!9;UBERON:0004733!3.80e-08!12;UBERON:0002028!3.80e-08!12;UBERON:0007277!3.80e-08!12;UBERON:0001872!6.89e-08!5;UBERON:0002771!1.20e-07!3;UBERON:0004732!1.93e-07!13;UBERON:0000988!7.68e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;3.24e-14;5!UBERON:0001950;1.65e-12;20!UBERON:0002619;2.21e-11;22!UBERON:0000956;5.16e-10;25!UBERON:0000203;5.16e-10;25!UBERON:0002791;7.10e-08;32!UBERON:0001869;7.10e-08;32!UBERON:0001893;9.64e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.99e-14,5;UBERON:0001950,1.91e-12,20;UBERON:0002619,2.53e-11,22;UBERON:0000956,5.80e-10,25;UBERON:0000203,5.80e-10,25;UBERON:0002791,9.52e-08,32;UBERON:0001869,9.52e-08,32;UBERON:0003528,2.81e-07,34;UBERON:0002020,2.81e-07,34;UBERON:0001893,2.81e-07,34 | |||
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| ||
|short_description=p2@LOC389023 | |short_description=p2@LOC389023 | ||
}} | }} |
Latest revision as of 14:35, 16 September 2015
Short description: | p2@LOC389023 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC389023_5end |
Coexpression cluster: | C2657_retinoblastoma_nonsmall_acute_myelodysplastic_large_hepatoblastoma_brain |
Association with transcript: | -7bp_to_ENST00000432658, NR_036580, uc002tld.2_5end |
EntrezGene: | LOC389023 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.60e-09 | 1 |
peptide hormone secreting cell | 3.31e-09 | 1 |
enteroendocrine cell | 3.31e-09 | 1 |
type D enteroendocrine cell | 3.31e-09 | 1 |
somatostatin secreting cell | 3.31e-09 | 1 |
pancreatic D cell | 3.31e-09 | 1 |
progenitor cell of endocrine pancreas | 3.31e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.99e-14 | 5 |
neocortex | 1.91e-12 | 20 |
regional part of cerebral cortex | 2.53e-11 | 22 |
cerebral cortex | 5.80e-10 | 25 |
pallium | 5.80e-10 | 25 |
regional part of telencephalon | 9.52e-08 | 32 |
cerebral hemisphere | 9.52e-08 | 32 |
brain grey matter | 2.81e-07 | 34 |
gray matter | 2.81e-07 | 34 |
telencephalon | 2.81e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
syndrome | 2.40e-09 | 1 |
somatostatinoma | 3.31e-09 | 1 |
acute myeloid leukemia | 7.27e-09 | 1 |