FFCP PHASE1:Hg19::chr5:158526709..158526741,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1879 | |EntrezGene=1879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3126 | |HGNC=3126 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000380654_5end | |association_with_transcript=-8bp_to_ENST00000380654_5end | ||
|cluster_id=chr5:158526709..158526741,- | |||
|coexpression_cluster_id=C857 | |||
|description=CAGE_peak_7_at_EBF1_5end | |description=CAGE_peak_7_at_EBF1_5end | ||
|id=chr5:158526709..158526741,- | |id=chr5:158526709..158526741,- | ||
|ontology_enrichment_celltype=CL:0000945!2.32e-26!24;CL:0000826!2.32e-26!24;CL:0000236!8.75e-17!14;CL:0000542!3.83e-09!53;CL:0000051!3.83e-09!53;CL:0000838!1.28e-08!52;CL:0000080!8.26e-07!6 | |ontology_enrichment_celltype=CL:0000945!2.32e-26!24;CL:0000826!2.32e-26!24;CL:0000236!8.75e-17!14;CL:0000542!3.83e-09!53;CL:0000051!3.83e-09!53;CL:0000838!1.28e-08!52;CL:0000080!8.26e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.49e-61;24!CL:0000236;3.88e-50;13!CL:0000542;1.00e-18;53!CL:0000136;7.73e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.22e-61,24;CL:0000826,1.22e-61,24;CL:0000236,1.84e-46,14;CL:0000838,1.29e-25,52;CL:0000542,4.93e-25,53;CL:0000051,4.93e-25,53;CL:0002087,6.92e-11,115;CL:0000738,1.99e-08,136;CL:0002031,3.32e-08,120;CL:0000988,1.70e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.00e-18;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.53e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.51e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-10!115 | |ontology_enrichment_uberon=UBERON:0007023!1.17e-10!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.45e-12;3!UBERON:0002390;2.02e-09;32!UBERON:0002193;1.28e-07;42!UBERON:0004177;3.20e-07;5!UBERON:0005057;3.20e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.45e-12,3;UBERON:0004854,7.45e-12,3;UBERON:0009034,7.45e-12,3;UBERON:0002095,7.45e-12,3;UBERON:0004782,7.45e-12,3;UBERON:0003281,7.45e-12,3;UBERON:0009664,7.45e-12,3;UBERON:0002296,7.45e-12,3;UBERON:0005602,7.45e-12,3;UBERON:0001179,7.45e-12,3;UBERON:0006293,7.45e-12,3 | |||
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| 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| ||
|short_description=p7@EBF1 | |short_description=p7@EBF1 | ||
}} | }} |
Latest revision as of 15:08, 16 September 2015
Short description: | p7@EBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EBF1_5end |
Coexpression cluster: | C857_non_lymphoma_CD19_acute_diffuse_Burkitt_B |
Association with transcript: | -8bp_to_ENST00000380654_5end |
EntrezGene: | EBF1 |
HGNC: | 3126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.22e-61 | 24 |
pro-B cell | 1.22e-61 | 24 |
B cell | 1.84e-46 | 14 |
lymphoid lineage restricted progenitor cell | 1.29e-25 | 52 |
lymphocyte | 4.93e-25 | 53 |
common lymphoid progenitor | 4.93e-25 | 53 |
nongranular leukocyte | 6.92e-11 | 115 |
leukocyte | 1.99e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 3.32e-08 | 120 |
hematopoietic cell | 1.70e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.45e-12 | 3 |
gastrointestinal system mesentery | 7.45e-12 | 3 |
stomach region | 7.45e-12 | 3 |
mesentery | 7.45e-12 | 3 |
gastrointestinal system serosa | 7.45e-12 | 3 |
mesentery of stomach | 7.45e-12 | 3 |
gut mesentery | 7.45e-12 | 3 |
dorsal mesentery | 7.45e-12 | 3 |
dorsal mesogastrium | 7.45e-12 | 3 |
peritoneal cavity | 7.45e-12 | 3 |
spleen primordium | 7.45e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.51e-09 | 10 |