FFCP PHASE1:Hg19::chr16:4292071..4292088,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6345 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11295 | |||
|TSSclassifier=strong | |||
|UniProt=Q86TD4,B3KPP4 | |||
|association_with_transcript=0bp_to_ENST00000330063,ENST00000399609,NM_001098814,uc002cvy.3,uc002cvz.3_5end | |||
|cluster_id=chr16:4292071..4292088,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_SRL_5end | |||
|id=chr16:4292071..4292088,- | |||
|ontology_enrichment_celltype=CL:0000188!2.83e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;5.84e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,5.06e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.35e-08;65!UBERON:0003104;9.52e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.30e-62!115;UBERON:0001049!4.97e-17!57;UBERON:0005068!4.97e-17!57;UBERON:0006241!4.97e-17!57;UBERON:0007135!4.97e-17!57;UBERON:0003075!4.76e-14!86;UBERON:0007284!4.76e-14!86;UBERON:0002346!6.72e-13!90;UBERON:0002616!7.18e-13!59;UBERON:0002780!1.21e-11!41;UBERON:0001890!1.21e-11!41;UBERON:0006240!1.21e-11!41;UBERON:0003080!3.30e-11!42;UBERON:0001017!4.96e-11!82;UBERON:0005743!7.86e-11!86;UBERON:0001893!2.50e-10!34;UBERON:0000955!2.79e-10!69;UBERON:0006238!2.79e-10!69;UBERON:0001869!3.65e-10!32;UBERON:0002020!3.66e-10!34;UBERON:0003528!3.66e-10!34;UBERON:0000481!3.86e-10!347;UBERON:0000073!1.27e-09!94;UBERON:0001016!1.27e-09!94;UBERON:0002791!1.39e-09!33;UBERON:0002619!2.58e-09!22;UBERON:0000153!4.59e-09!129;UBERON:0007811!4.59e-09!129;UBERON:0000483!8.78e-09!309;UBERON:0000119!1.68e-08!312;UBERON:0004111!3.44e-08!241;UBERON:0001950!5.50e-08!20;UBERON:0000956!8.95e-08!25;UBERON:0000203!8.95e-08!25;UBERON:0000477!1.18e-07!286;UBERON:0004121!1.57e-07!169;UBERON:0000033!1.75e-07!123;UBERON:0003076!2.24e-07!15;UBERON:0003057!2.24e-07!15;UBERON:0003056!4.20e-07!61;UBERON:0000924!4.53e-07!173;UBERON:0006601!4.53e-07!173;UBERON:0000025!7.31e-07!194;UBERON:0000922!8.86e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.03e-16;16!UBERON:0002036;2.03e-16;16!UBERON:0007023;7.61e-10;114!UBERON:0002385;1.86e-08;31!UBERON:0001015;1.86e-08;31!UBERON:0000383;1.86e-08;31!UBERON:0004151;1.90e-08;3!UBERON:0003978;2.60e-08;3!UBERON:0000946;2.60e-08;3!UBERON:0006947;1.76e-07;3!UBERON:0004054;1.76e-07;3!UBERON:0003135;7.62e-07;11!UBERON:0007100;9.30e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.33e-36,114;UBERON:0003103,5.51e-10,68;UBERON:0004151,1.90e-08,3;UBERON:0003978,2.61e-08,3;UBERON:0009751,2.61e-08,3;UBERON:0000946,2.61e-08,3;UBERON:0002523,2.61e-08,3;UBERON:0005983,2.61e-08,3;UBERON:0002165,2.61e-08,3;UBERON:0002062,2.61e-08,3;UBERON:0007280,2.61e-08,3;UBERON:0006947,1.97e-07,3;UBERON:0004054,1.97e-07,3;UBERON:0003135,8.30e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,14.8623478383433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,16.345786571101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,1.46561395144326,0,0,0,0,0,0,0,3.19201543978521,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,1.55491582523056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8120036186747,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53353071666084,0,0,0,0,0,0,0,0,20.5286935227246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6251528326509,0,0.553107505625109,0,0,109.119608771852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,13.1472176877286,1.84858340537573,5.52613229014066,11.5782720887006,0.107420244868274,5.51063436874068,14.2328467784889,148.594467494405,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0.422215270595328,0,0,0,0,2.01090682660736,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8416052661202,0,0,0,0,28.2116446791007,0,0,0.844016498463076,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,3.25523238601881,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.442317039724898,0.591095237907095,0.87754158861589,0,0,2.46240827212151,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,1.99052386215701,0.796118080530053,0.611030144933625,0,0,0,0.404406797884062,221.511430654466,0,0,0,0,3.15667522279512,0,0,4.17031425548021,0,0,0,0,0,0,0,0,0,0,0,16.4243068147508,0,0.0967563312890851,0,0,11.0567478796798,0,32.9931881539577,0,0,1.13959432720582,0,0,1.70762395791482,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,93.8388868274774,144.371067127361,25.1255558601885,237.018973592302,448.970446350853,287.444837185132,376.966464123021,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.728994679896296,0,2.12775409707835,1.41627387964495,0,0,0,187.964870836196,170.157636383916,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,1.32506888912221,0.258565912723101,0.39669780522807,0,0,0.640724475406168,2.04365596629566,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,1.14681839138014,0.776503360757966,2.35966331177257,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,62.2077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,0.478901577171454,1.02558182120378,0,3.66533438060355,0.807378228159255,2.85538840518309,0,0,0,0,0,0,0,1.5794168953344,0,0,0,0,0,1.2832141077495,0,0.413373593002368,1.96589011601111,0,3.83780436800028,117.105838099873,0,0,0,1.00885116665647,0,0.227662191351298,0.0887023701626388,0,0,0.883606528698812,2.17050152757402,0,0,1.25588948560822,0.314231179832004,0,4.56579360254748,0,0,0.857718530119876,0,0,7.12818916440576,0,0,0,0,1.72090943528111,0,0,2.11693525095465,0,0,0,0,0,0,191.638935807617,363.939650305396,532.354823984233,51.4853652642688,0,0.198950775161368,0,0,42.5469799804811,0,0.848915739187391,0.874238242015829,0,1.47088993052343,0,0.392616934229891,0.297046400327086,3.8039015482506,0,0,0.386747327841463,0,0,0,0,0.730336388246517,9.17458566809082,0,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,2.34913964476542,1.33982065078089,0.829169439458779,0.620597975171371,157.366678642924,107.128994158683,0.775066918032073,0.931120714437869,0,3.69153518013356,9.29739069207809,171.996230838599,249.48807649117,12.729538019757,4.37505452895326,39.5865824289756,0,0,0,0,122.013290049796,3.54500188130313,0,1.99727032255654,12.2777014090526,0 | |||
|short_description=p1@SRL | |||
}} |
Latest revision as of 15:54, 16 September 2015
Short description: | p1@SRL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRL_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000330063, ENST00000399609, NM_001098814, uc002cvy.3, uc002cvz.3_5end |
EntrezGene: | SRL |
HGNC: | 11295 |
UniProt: | Q86TD4B3KPP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 5.06e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.33e-36 | 114 |
compound organ | 5.51e-10 | 68 |
cardiac chamber | 1.90e-08 | 3 |
valve | 2.61e-08 | 3 |
cardiac mesenchyme | 2.61e-08 | 3 |
cardial valve | 2.61e-08 | 3 |
tunica intima | 2.61e-08 | 3 |
heart layer | 2.61e-08 | 3 |
endocardium | 2.61e-08 | 3 |
endocardial cushion | 2.61e-08 | 3 |
presumptive endocardium | 2.61e-08 | 3 |
male genital duct | 1.97e-07 | 3 |
internal male genitalia | 1.97e-07 | 3 |
male reproductive organ | 8.30e-07 | 11 |