FFCP PHASE1:Hg19::chr1:144994910..144994932,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:144994910..144994932,- to FFCP PHASE1:Hg19::chr1:144994910..144994932,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9659 | |EntrezGene=9659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15580 | |HGNC=15580 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VU43,E9PJU0 | |UniProt=Q5VU43,E9PJU0 | ||
|association_with_transcript=0bp_to_ENST00000369354,ENST00000526445,ENST00000530472,ENST00000533845_5end | |||
|cluster_id=chr1:144994910..144994932,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_PDE4DIP_5end | |||
|id=chr1:144994910..144994932,- | |||
|ontology_enrichment_celltype=CL:0000188!2.58e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.04e-10;9!CL:0002541;6.96e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,8.42e-11,9;CL:0002541,7.04e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006603;7.47e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.88e-50!115;UBERON:0001049!2.26e-15!57;UBERON:0005068!2.26e-15!57;UBERON:0006241!2.26e-15!57;UBERON:0007135!2.26e-15!57;UBERON:0002616!2.77e-14!59;UBERON:0003075!1.40e-13!86;UBERON:0007284!1.40e-13!86;UBERON:0001017!2.41e-13!82;UBERON:0002346!3.99e-13!90;UBERON:0005743!6.40e-13!86;UBERON:0000955!2.58e-12!69;UBERON:0006238!2.58e-12!69;UBERON:0000073!2.33e-11!94;UBERON:0001016!2.33e-11!94;UBERON:0000153!7.41e-11!129;UBERON:0007811!7.41e-11!129;UBERON:0004121!9.44e-11!169;UBERON:0000924!1.34e-10!173;UBERON:0006601!1.34e-10!173;UBERON:0003080!2.33e-10!42;UBERON:0002780!9.60e-10!41;UBERON:0001890!9.60e-10!41;UBERON:0006240!9.60e-10!41;UBERON:0000481!1.72e-09!347;UBERON:0000033!2.89e-09!123;UBERON:0001950!7.36e-09!20;UBERON:0002619!8.52e-09!22;UBERON:0001893!1.10e-08!34;UBERON:0002020!1.47e-08!34;UBERON:0003528!1.47e-08!34;UBERON:0002791!5.64e-08!33;UBERON:0002298!1.03e-07!8;UBERON:0001869!1.59e-07!32;UBERON:0003056!1.67e-07!61;UBERON:0000956!2.66e-07!25;UBERON:0000203!2.66e-07!25;UBERON:0000475!8.89e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;5.54e-18;16!UBERON:0002036;5.54e-18;16!UBERON:0004151;1.59e-08;3!UBERON:0003978;2.28e-08;3!UBERON:0000946;2.28e-08;3!UBERON:0003124;6.96e-08;3!UBERON:0000920;6.96e-08;3!UBERON:0002385;7.74e-08;31!UBERON:0001015;7.74e-08;31!UBERON:0000383;7.74e-08;31!UBERON:0007023;1.99e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.74e-23,114;UBERON:0004151,1.59e-08,3;UBERON:0003978,2.28e-08,3;UBERON:0009751,2.28e-08,3;UBERON:0000946,2.28e-08,3;UBERON:0002523,2.28e-08,3;UBERON:0005983,2.28e-08,3;UBERON:0002165,2.28e-08,3;UBERON:0002062,2.28e-08,3;UBERON:0007280,2.28e-08,3;UBERON:0000920,7.04e-08,3;UBERON:0003103,6.16e-07,68 | |||
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| ||
|short_description=p2@PDE4DIP | |||
}} | }} |
Latest revision as of 16:53, 16 September 2015
Short description: | p2@PDE4DIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDE4DIP_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000369354, ENST00000526445, ENST00000530472, ENST00000533845_5end |
EntrezGene: | PDE4DIP |
HGNC: | 15580 |
UniProt: | Q5VU43E9PJU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 8.42e-11 | 9 |
chorionic membrane mesenchymal stem cell | 7.04e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.74e-23 | 114 |
cardiac chamber | 1.59e-08 | 3 |
valve | 2.28e-08 | 3 |
cardiac mesenchyme | 2.28e-08 | 3 |
cardial valve | 2.28e-08 | 3 |
tunica intima | 2.28e-08 | 3 |
heart layer | 2.28e-08 | 3 |
endocardium | 2.28e-08 | 3 |
endocardial cushion | 2.28e-08 | 3 |
presumptive endocardium | 2.28e-08 | 3 |
egg chorion | 7.04e-08 | 3 |
compound organ | 6.16e-07 | 68 |