FFCP PHASE1:Hg19::chr17:61959323..61959338,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2689 | |EntrezGene=2689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4262 | |HGNC=4262 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-28bp_to_ENST00000332800_5end | |association_with_transcript=-28bp_to_ENST00000332800_5end | ||
|cluster_id=chr17:61959323..61959338,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_2_at_GH2_5end | |description=CAGE_peak_2_at_GH2_5end | ||
|id=chr17:61959323..61959338,- | |id=chr17:61959323..61959338,- | ||
|ontology_enrichment_celltype=CL:0002322!1.76e-39!5;CL:0000039!9.84e-17!7;CL:0000586!9.84e-17!7;CL:0000540!2.66e-09!6;CL:0000031!2.66e-09!6;CL:0000404!2.66e-09!6;CL:0000242!1.28e-07!2;CL:0000047!3.45e-07!8 | |ontology_enrichment_celltype=CL:0002322!1.76e-39!5;CL:0000039!9.84e-17!7;CL:0000586!9.84e-17!7;CL:0000540!2.66e-09!6;CL:0000031!2.66e-09!6;CL:0000404!2.66e-09!6;CL:0000242!1.28e-07!2;CL:0000047!3.45e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.35e-08;7!CL:0000586;2.35e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.35e-08,7;CL:0000586,2.35e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.46e-50;1!UBERON:0004872;1.89e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.54e-14!8;UBERON:0003135!9.76e-11!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;8.82e-14;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,8.82e-14,4;UBERON:0004340,8.82e-14,4;UBERON:0003124,1.89e-08,7 | |||
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|short_description=p2@GH2 | |short_description=p2@GH2 | ||
}} | }} |
Latest revision as of 18:34, 16 September 2015
Short description: | p2@GH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GH2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -28bp_to_ENST00000332800_5end |
EntrezGene: | GH2 |
HGNC: | 4262 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.35e-08 | 7 |
germ cell | 2.35e-08 | 7 |