FFCP PHASE1:Hg19::chr13:20806422..20806431,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10804 | |EntrezGene=10804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4288 | |HGNC=4288 | ||
|TSSclassifier=strong | |||
|UniProt=O95452 | |UniProt=O95452 | ||
|association_with_transcript=8bp_to_ENST00000400066_5end | |association_with_transcript=8bp_to_ENST00000400066_5end | ||
|cluster_id=chr13:20806422..20806431,- | |||
|coexpression_cluster_id=C3356 | |||
|description=CAGE_peak_5_at_GJB6_5end | |description=CAGE_peak_5_at_GJB6_5end | ||
|id=chr13:20806422..20806431,- | |id=chr13:20806422..20806431,- | ||
|ontology_enrichment_celltype=CL:0002076!1.13e-10!43;CL:0000244!1.75e-09!4;CL:0000731!1.75e-09!4;CL:0000223!2.65e-07!59 | |ontology_enrichment_celltype=CL:0002076!1.13e-10!43;CL:0000244!1.75e-09!4;CL:0000731!1.75e-09!4;CL:0000223!2.65e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000244;9.79e-36;4!CL:0000731;9.79e-36;4!CL:0002252;3.55e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.98e-36,4;CL:0000731,8.98e-36,4;CL:0002252,3.40e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0010115;7.22e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;3.55e-10;1!DOID:3149;3.55e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.10e-10,1;DOID:3149,3.10e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.74e-29!57;UBERON:0005068!1.74e-29!57;UBERON:0006241!1.74e-29!57;UBERON:0007135!1.74e-29!57;UBERON:0001017!4.20e-23!82;UBERON:0002619!6.14e-23!22;UBERON:0002780!1.43e-22!41;UBERON:0001890!1.43e-22!41;UBERON:0006240!1.43e-22!41;UBERON:0002616!1.85e-22!59;UBERON:0001893!5.14e-22!34;UBERON:0002020!5.82e-22!34;UBERON:0003528!5.82e-22!34;UBERON:0003080!7.25e-22!42;UBERON:0003075!8.44e-22!86;UBERON:0007284!8.44e-22!86;UBERON:0001869!9.76e-22!32;UBERON:0005743!1.59e-21!86;UBERON:0000153!2.74e-21!129;UBERON:0007811!2.74e-21!129;UBERON:0002791!9.38e-21!33;UBERON:0000955!1.31e-20!69;UBERON:0006238!1.31e-20!69;UBERON:0002346!2.45e-20!90;UBERON:0001950!7.82e-20!20;UBERON:0000956!1.15e-19!25;UBERON:0000203!1.15e-19!25;UBERON:0000033!1.21e-19!123;UBERON:0004121!8.11e-19!169;UBERON:0007023!1.13e-18!115;UBERON:0000073!1.81e-18!94;UBERON:0001016!1.81e-18!94;UBERON:0000924!4.88e-18!173;UBERON:0006601!4.88e-18!173;UBERON:0003056!1.41e-15!61;UBERON:0000365!3.72e-11!5;UBERON:0000064!7.13e-10!219;UBERON:0005910!3.49e-09!6;UBERON:0003076!1.00e-08!15;UBERON:0003057!1.00e-08!15;UBERON:0001871!3.96e-08!7;UBERON:0000200!6.90e-08!6;UBERON:0000475!3.65e-07!365;UBERON:0002240!8.72e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.16e-28;5!UBERON:0005910;6.13e-24;6!UBERON:0002360;1.86e-18;2!UBERON:0000094;1.86e-18;2!UBERON:0010743;1.86e-18;2!UBERON:0000486;4.35e-12;12!UBERON:0005795;3.55e-10;1!UBERON:0002363;7.22e-10;1!UBERON:0002372;7.22e-10;1!UBERON:0000997;7.22e-10;1!UBERON:0005056;7.22e-10;1!UBERON:0001961;7.22e-10;1!UBERON:0001744;7.22e-10;1!UBERON:0004176;7.22e-10;1!UBERON:0001042;7.22e-10;1!UBERON:0001735;7.22e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.08e-28,5;UBERON:0005910,5.79e-24,6;UBERON:0002360,1.20e-18,2;UBERON:0000094,1.20e-18,2;UBERON:0010743,1.20e-18,2;UBERON:0002363,4.85e-10,1;UBERON:0007645,4.85e-10,1;UBERON:0007647,4.85e-10,1;UBERON:0010115,4.85e-10,1;UBERON:0000997,7.55e-10,1;UBERON:0005056,7.55e-10,1;UBERON:0002372,8.99e-10,1;UBERON:0001961,8.99e-10,1;UBERON:0001744,8.99e-10,1;UBERON:0001735,8.99e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,1.00311897234407,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.960950336825531,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0,1.29151611801369,5.05414427002877,4.43430153536676,7.3511488066227,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.74214478529481,1.99613798001194,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0.591095237907095,4.60709334023342,0,8.78369588955201,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.61214552326098,1.70603764996917,0,0,0,0,0,0,0,0,0.347119476670262,1.17590876897253,0,0,0,0,0,0,0.969890164884194,0,0.451961481561065,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.485996453264197,2.68347750079413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.500763722825999,0,0.998361463831671,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0.615349092722265,0.504143392443436,0.96820153449905,0.322951291263702,0,0.294443155503077,1.1796972334774,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,1.44680757550829,0.507326481551255,0.546974809018219,0,0,0,0.766574565837572,0.535701835878287,0,0,0,0,0,0,0.40781839786099,0.72350050919134,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0.297046400327086,6.339835913751,0,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0.747906392100062,3.05445483238264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0.639701945702943,0,0.193766729508018,0.0620747142958579,0,0,0.404234377916439,0.870866991587845,0.684466602170562,1.14498490124799,0,0,0.732629417498771,0,0,0,0,0.122241444182866,2.03448089157869,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,1.00311897234407,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.960950336825531,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0,1.29151611801369,5.05414427002877,4.43430153536676,7.3511488066227,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.74214478529481,1.99613798001194,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0.591095237907095,4.60709334023342,0,8.78369588955201,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.61214552326098,1.70603764996917,0,0,0,0,0,0,0,0,0.347119476670262,1.17590876897253,0,0,0,0,0,0,0.969890164884194,0,0.451961481561065,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.485996453264197,2.68347750079413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.500763722825999,0,0.998361463831671,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0.615349092722265,0.504143392443436,0.96820153449905,0.322951291263702,0,0.294443155503077,1.1796972334774,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,1.44680757550829,0.507326481551255,0.546974809018219,0,0,0,0.766574565837572,0.535701835878287,0,0,0,0,0,0,0.40781839786099,0.72350050919134,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0.297046400327086,6.339835913751,0,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0.747906392100062,3.05445483238264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0.639701945702943,0,0.193766729508018,0.0620747142958579,0,0,0.404234377916439,0.870866991587845,0.684466602170562,1.14498490124799,0,0,0.732629417498771,0,0,0,0,0.122241444182866,2.03448089157869,0,0,0 | ||
|short_description=p5@GJB6 | |short_description=p5@GJB6 | ||
}} | }} |
Latest revision as of 18:51, 16 September 2015
Short description: | p5@GJB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GJB6_5end |
Coexpression cluster: | C3356_Urothelial_cervical_tongue_Neutrophils_keratoacanthoma_uterus_Sebocyte |
Association with transcript: | 8bp_to_ENST00000400066_5end |
EntrezGene: | GJB6 |
HGNC: | 4288 |
UniProt: | O95452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.98e-36 | 4 |
urothelial cell | 8.98e-36 | 4 |
epithelial cell of esophagus | 3.40e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.08e-28 | 5 |
transitional epithelium | 5.79e-24 | 6 |
meninx | 1.20e-18 | 2 |
membrane organ | 1.20e-18 | 2 |
meningeal cluster | 1.20e-18 | 2 |
dura mater | 4.85e-10 | 1 |
future meninx | 4.85e-10 | 1 |
ectomeninx | 4.85e-10 | 1 |
future dura mater | 4.85e-10 | 1 |
mammalian vulva | 7.55e-10 | 1 |
external female genitalia | 7.55e-10 | 1 |
tonsil | 8.99e-10 | 1 |
mucosa-associated lymphoid tissue | 8.99e-10 | 1 |
lymphoid tissue | 8.99e-10 | 1 |
tonsillar ring | 8.99e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.10e-10 | 1 |
keratoacanthoma | 3.10e-10 | 1 |