FFCP PHASE1:Hg19::chr4:174256283..174256303,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3148 | |EntrezGene=3148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5000 | |HGNC=5000 | ||
|TSSclassifier=strong | |||
|UniProt=P26583 | |UniProt=P26583 | ||
|association_with_transcript=-7bp_to_ENST00000296503_5end | |association_with_transcript=-7bp_to_ENST00000296503_5end | ||
|cluster_id=chr4:174256283..174256303,- | |||
|description=CAGE_peak_6_at_HMGB2_5end | |description=CAGE_peak_6_at_HMGB2_5end | ||
|id=chr4:174256283..174256303,- | |id=chr4:174256283..174256303,- | ||
|ontology_enrichment_celltype=CL:0000333!1.95e-09!41;CL:0000133!4.18e-09!59;CL:0002319!1.18e-08!25;CL:0000095!1.63e-07!17;CL:0000123!1.63e-07!17;CL:0000066!1.90e-07!254;CL:0000548!2.04e-07!679;CL:0000004!2.04e-07!679;CL:0000255!2.04e-07!679;CL:0000012!3.20e-07!682 | |ontology_enrichment_celltype=CL:0000333!1.95e-09!41;CL:0000133!4.18e-09!59;CL:0002319!1.18e-08!25;CL:0000095!1.63e-07!17;CL:0000123!1.63e-07!17;CL:0000066!1.90e-07!254;CL:0000548!2.04e-07!679;CL:0000004!2.04e-07!679;CL:0000255!2.04e-07!679;CL:0000012!3.20e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.88e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,2.81e-08,59;CL:0000333,1.41e-07,41;CL:0002319,2.51e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.09e-34!235;DOID:14566!1.77e-32!239;DOID:0050686!7.36e-20!137;DOID:0050687!7.79e-18!143;DOID:305!2.11e-14!106;DOID:2531!7.34e-11!51;DOID:0060083!7.34e-11!51;DOID:1240!2.74e-08!39 | |ontology_enrichment_disease=DOID:162!6.09e-34!235;DOID:14566!1.77e-32!239;DOID:0050686!7.36e-20!137;DOID:0050687!7.79e-18!143;DOID:305!2.11e-14!106;DOID:2531!7.34e-11!51;DOID:0060083!7.34e-11!51;DOID:1240!2.74e-08!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.06e-13,235;DOID:14566,8.75e-13,239;DOID:0050687,1.20e-10,143;DOID:305,1.96e-08,106;DOID:0050686,1.59e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0.527533956456907,0.123766352960047,0,0,0,0,0,1.23121058076788,0.816002764977012,0.626909442956176,1.43117993565528,3.01123735160345,1.63205431473244,1.45185470921107,1.23150884174919,1.73163718890094,0,0,0,0.919421224478927,0,0,1.39440961044543,0.284338464974843,2.34880351467878,0,0,0,0,0,0,0.290796477559129,0,0.485168122375632,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0.449446968890169,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.130059347559878,0.986627427622057,0.276350017785848,0.579606171470105,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0,0.795285947051099,0,1.51255707462509,0.221729397462564,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,1.10047216776027,1.04497483268405,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.803697554556718,0,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0,0.506522046658319,0,0.573673241497627,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0.404132016209064,0.980771418680752,0,0,0.234321431833797,0,0,0,0.587172493218824,0.971237666208789,0.702254033511242,0.204154171254893,0.982674538494144,0,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.250237039743928,0,0,0,0,0,1.25572744982203,0,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0.675105328965065,0.292311015483596,0.757301322732344,0,0.323292113637624,0.355009592516614,0.705264687593482,0.847802961552438,0,0.545492241181669,0,1.21973706129595,0.662648841607426,1.04574548582567,1.14027160516907,0.252320850875628,1.45990943630332,1.56449532329816,0,4.14404764057442,0,0,1.0647612003586,1.18009283054671,1.44606617930089,0.661763836394364,0.435758888184812,0.474541238222193,0.269662616320329,0,1.15424147083917,0.738155454624648,2.80483547606892,0.4115740113314,0,0,0,0,0.882926198829301,0.122988438543114,0.343135620597051,0,0,0,0,0,3.11980435583874,0,0.115930404975077,0,0.144366447761074,0,0.380508304469197,9.4824527755113,8.58486162094873,0,0,0,0,0,0,0,0,2.30029607499127,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.126995788584338,0.381988425558278,0,3.4214489204541,0.308482478109971,0.300343057843917,0,0,0,0.2933531432838,0,0,0,0,1.04007436911366,1.02882949704857,1.41849132023278,1.8649552531127,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0.289562613335158,0,0.179060963239896,0.784596007954691,0,0,0,0.508189248444927,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0,0.157702415033935,0.35142424497814,0,0,0,0.664225598535437,0.368738337083406,0.434418072340414,0.391602314925481,0.343143423810856,0.206768026122887,0,0.106727557803444,1.21251028578504,0,1.20956117331872,0,0,0,0,0,0,0,0.771048469013278,0,0.246381468041427,0,0.116210378459959,1.0877350463246,0,0,0.34444334449382,0.182091168006717,0,0.451199612907412,0.0770153371044148,1.56869953835371,0,0.422206515571503,0,0.340187410553031,0.863663664408557,0,0.270946437543853,0,0,0.831076008928724,0.447749509444357,1.31555925987561,1.0457418040996,0.512900250232778,0.328014645699706,0,0.103041011647722,1.73981983154852,1.07262349896764,0,0,0,0,0.616194468458578,0,0.689182862422653,0.107420244868274,0.435050081742686,0.511359764496605,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,1.3940745403212,0,0.532306030317022,0,0.55597265731176,0.143124886741991,0,0,0,0.767693373934002,0,0.318203247925937,2.35484592059769,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0.438450885253763,0,0,0.202910376962704,0.92947049429925,0.281695602532241,0.286822704408103,0.196498082026242,0,0.709522128141196,0,0,0.75894634753143,1.04980416073495,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.534120355637366,0,1.96032172784825,1.11481905075431,1.298422916788,2.27653898714925,0.797131363644112,0.798317485731266,0.5745161103971,0.423347165447766,0,0.280797178113459,0.684704037099577,0.313359791546046,0,0.50787533340481,1.2847046008296,0.605399121573143,0.851692475380653,0,0.614481528616916,0.671028323677248,0.500547425135725,0.390776190804081,1.11362469558097,0,1.35227839237992,0.33307196799782,0,0.18714054040822,0.146508179271894,0.242721043499027,6.24082951953879,1.13654458722565,0.23874448473769,0.593929361665277,0.307160702099232,0,0,0.222617410045812,1.6480387422676,6.96713846822378,0,0.276283915531148,1.0077309914171,0.511343412510774,0.369254416383208,0.311039587661807,0.179736702294654,0.179021174675609,0.511572370226872,0,0,1.11136990144637,0,0,1.99613798001194,0,0.349839999984783,0,0,1.27126825146383,1.41832609060762,2.41320361269025,2.91604613383254,1.21537496453305,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0.0769502585037971,0,0.23056390438806,0.628303510868405,0.651884231532048,0,0.366390373607449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| ||
|short_description=p6@HMGB2 | |short_description=p6@HMGB2 | ||
}} | }} |
Latest revision as of 19:09, 16 September 2015
Short description: | p6@HMGB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HMGB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000296503_5end |
EntrezGene: | HMGB2 |
HGNC: | 5000 |
UniProt: | P26583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 2.81e-08 | 59 |
migratory neural crest cell | 1.41e-07 | 41 |
neural cell | 2.51e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.06e-13 | 235 |
disease of cellular proliferation | 8.75e-13 | 239 |
cell type cancer | 1.20e-10 | 143 |
carcinoma | 1.96e-08 | 106 |
organ system cancer | 1.59e-07 | 137 |