FFCP PHASE1:Hg19::chr17:64298521..64298534,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5578 | |EntrezGene=5578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9393 | |HGNC=9393 | ||
|TSSclassifier=strong | |||
|UniProt=B5BU22,P17252,Q7Z727,Q59FI5 | |UniProt=B5BU22,P17252,Q7Z727,Q59FI5 | ||
|association_with_transcript=-391bp_to_NM_002737,uc002jfo.1,uc002jfp.1_5end | |association_with_transcript=-391bp_to_NM_002737,uc002jfo.1,uc002jfp.1_5end | ||
|cluster_id=chr17:64298521..64298534,+ | |||
|description=CAGE_peak_5_at_PRKCA_5end | |description=CAGE_peak_5_at_PRKCA_5end | ||
|id=chr17:64298521..64298534,+ | |id=chr17:64298521..64298534,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.38e-10!180;CL:0000057!3.19e-09!75 | |ontology_enrichment_celltype=CL:0000055!7.38e-10!180;CL:0000057!3.19e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0000737;1.20e-16;4!CL:0000746;1.16e-10;3!CL:0002174;3.32e-08;1!CL:0000228;3.32e-08;1!CL:0002372;3.32e-08;1!CL:0002591;3.32e-08;1!CL:0000501;3.32e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000737,1.03e-16,4;CL:0000746,1.16e-10,3;CL:0000513,1.16e-10,3;CL:0000228,2.69e-08,1;CL:0002372,2.69e-08,1;CL:0002174,3.33e-08,1;CL:0000501,3.33e-08,1;CL:0002591,5.07e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000513;1.16e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.34e-11!94;UBERON:0001016!5.34e-11!94;UBERON:0001017!8.36e-11!82;UBERON:0005743!3.73e-10!86;UBERON:0002616!9.59e-09!59;UBERON:0000955!1.09e-08!69;UBERON:0006238!1.09e-08!69;UBERON:0001049!1.62e-08!57;UBERON:0005068!1.62e-08!57;UBERON:0006241!1.62e-08!57;UBERON:0007135!1.62e-08!57;UBERON:0002780!5.70e-07!41;UBERON:0001890!5.70e-07!41;UBERON:0006240!5.70e-07!41 | |ontology_enrichment_uberon=UBERON:0000073!5.34e-11!94;UBERON:0001016!5.34e-11!94;UBERON:0001017!8.36e-11!82;UBERON:0005743!3.73e-10!86;UBERON:0002616!9.59e-09!59;UBERON:0000955!1.09e-08!69;UBERON:0006238!1.09e-08!69;UBERON:0001049!1.62e-08!57;UBERON:0005068!1.62e-08!57;UBERON:0006241!1.62e-08!57;UBERON:0007135!1.62e-08!57;UBERON:0002780!5.70e-07!41;UBERON:0001890!5.70e-07!41;UBERON:0006240!5.70e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;3.32e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.57e-08,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0.236132343941038,0,0,0,0,0.30120591877825,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0.328875809207352,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0.821127996921047,0,0.267440195783507,0.579297615531196,2.43806866313962,2.01210257911091,0,1.44575660953827,0.50133791063589,0.289693037921647,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,1.14734648299525,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.817309515567294,0.605429710579726,0,0.234321431833797,0.312160076830321,0,0.448346041655403,0,0.809364721840658,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0.910161361938026,0,0,0.250237039743928,0.277064115484183,1.75591048352335,0.919463387397059,0.150238058906597,0,0.538168907066586,0,0.211931901159562,1.80054657650641,0.309157587715317,0.515281080091258,0.18611685633159,0.337552664482532,0,0.757301322732344,0.184099797284599,0.161646056818812,1.06502877754984,0.10075209822764,0.339121184620975,0,0,0,0.243947412259191,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0.441175890929576,0,0,0.134831308160164,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0.207328115540772,1.00883967391873,0.25248486685276,0,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.1466765716419,0.129271715757778,0,0,1.06375246633948,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,1.14861935834114,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0,1.01637849688985,0,2.31986643833309,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0.213455115606889,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.482561763430822,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0.366277859273374,0.165018999841176,0,0,0,0.096670718292122,0.308097234229289,0,0.137836572484531,0.107420244868274,0,0.170453254832202,0.178064071293475,0,0,0.255225424989168,0,0,0.62962469366128,0,0,0,0,0,0,1.48863347743867,0.316379424718726,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0.141405431953713,1.13008116620243,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0.491245205065606,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,1.56512055366511,0.159426272728822,0,0,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0,5.01131113011436,0,0,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0,0,3.97659059106519,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0.359473404589307,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.461701551022782,0.227884111694002,0.23056390438806,0,0.108647371922008,0,0,0,0,0.31396051279005,0,0.225595660617181,0,0.335643173951685,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0.394584402849391,0,0.91821828489147,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0.0882561266915003,0,0.137041924646751,0,0.189932387867636,0,0,0.213452994739353,0.39961921916426,0.432271251462318,0,0.171594997861965,0,0.124252535565433,0,0.135904206073614,0,0.407992870545287,0.577901179803038,0,0.821432273351958,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0.303747783290123,0,0,0.577000469484979,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0.164185041498678,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,1.14681839138014,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0.597019211547496,0.467426619694449,0.554805861502613,0.189403005275089,0,0.889811221596536,0,0.907385542579434,0.15543720058278,0.147855149989634,0,0,0,0.829412415681711,0,0,0,0.380805212168795,0.406870733204662,0.545545977607678,0,0,0.398095888698616,0,0,0.336749488765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| ||
|short_description=p5@PRKCA | |short_description=p5@PRKCA | ||
}} | }} |
Latest revision as of 21:15, 16 September 2015
Short description: | p5@PRKCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRKCA_5end |
Coexpression cluster: | NA |
Association with transcript: | -391bp_to_NM_002737, uc002jfo.1, uc002jfp.1_5end |
EntrezGene: | PRKCA |
HGNC: | 9393 |
UniProt: | B5BU22P17252Q7Z727Q59FI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striated muscle cell | 1.03e-16 | 4 |
cardiac muscle cell | 1.16e-10 | 3 |
cardiac muscle myoblast | 1.16e-10 | 3 |
multinucleate cell | 2.69e-08 | 1 |
myotube | 2.69e-08 | 1 |
follicular cell of ovary | 3.33e-08 | 1 |
granulosa cell | 3.33e-08 | 1 |
smooth muscle cell of the pulmonary artery | 5.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 3.57e-08 | 1 |