FFCP PHASE1:Hg19::chr2:30143685..30143694,-: Difference between revisions
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|id=chr2:30143685..30143694,-
|short_description=p11@ALK
|description=CAGE_peak_11_at_ALK_5end
|association_with_transcript=-160bp_to_ENST00000431873_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=238 | |EntrezGene=238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=427 | |HGNC=427 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPW7 | |UniProt=E7EPW7 | ||
|association_with_transcript=-160bp_to_ENST00000431873_5end | |||
|cluster_id=chr2:30143685..30143694,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_11_at_ALK_5end | |||
|id=chr2:30143685..30143694,- | |||
|ontology_enrichment_celltype=CL:0000313!5.16e-21!1;CL:0000242!2.73e-11!2;CL:0000159!3.35e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2152!5.16e-21!1 | |||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001896!3.56e-27!3;UBERON:0005290!3.56e-27!3;UBERON:0010096!3.56e-27!3;UBERON:0002022!4.22e-21!1;UBERON:0004911!5.16e-21!1;UBERON:0007190!6.31e-21!1;UBERON:0000073!9.32e-13!94;UBERON:0001016!9.32e-13!94;UBERON:0001049!3.35e-12!57;UBERON:0005068!3.35e-12!57;UBERON:0006241!3.35e-12!57;UBERON:0007135!3.35e-12!57;UBERON:0002616!8.60e-12!59;UBERON:0000007!2.02e-11!2;UBERON:0001017!2.52e-11!82;UBERON:0004909!3.35e-11!2;UBERON:0001870!4.09e-11!2;UBERON:0002298!7.67e-11!8;UBERON:0005743!8.47e-11!86;UBERON:0000955!5.96e-10!69;UBERON:0006238!5.96e-10!69;UBERON:0004121!6.48e-09!169;UBERON:0000924!1.06e-08!173;UBERON:0006601!1.06e-08!173;UBERON:0003075!4.26e-08!86;UBERON:0007284!4.26e-08!86;UBERON:0002780!6.72e-08!41;UBERON:0001890!6.72e-08!41;UBERON:0006240!6.72e-08!41;UBERON:0002346!9.83e-08!90;UBERON:0003080!1.01e-07!42;UBERON:0004733!1.57e-07!12;UBERON:0002028!1.57e-07!12;UBERON:0007277!1.57e-07!12;UBERON:0004732!5.11e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
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|short_description=p11@ALK | |||
}} | }} |
Latest revision as of 21:30, 16 September 2015
Short description: | p11@ALK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ALK_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -160bp_to_ENST00000431873_5end |
EntrezGene: | ALK |
HGNC: | 427 |
UniProt: | E7EPW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |