FFCP PHASE1:Hg19::chr2:31637816..31637836,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7498 | |EntrezGene=7498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12805 | |HGNC=12805 | ||
|TSSclassifier=strong | |||
|UniProt=P47989 | |UniProt=P47989 | ||
|association_with_transcript=-205bp_to_NM_000379,uc002rnv.1_5end | |association_with_transcript=-205bp_to_NM_000379,uc002rnv.1_5end | ||
|cluster_id=chr2:31637816..31637836,- | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_7_at_XDH_5end | |description=CAGE_peak_7_at_XDH_5end | ||
|id=chr2:31637816..31637836,- | |id=chr2:31637816..31637836,- | ||
|ontology_enrichment_celltype=CL:0000244!1.46e-13!4;CL:0000731!1.46e-13!4;CL:0000066!2.51e-12!254;CL:0002076!4.70e-11!43;CL:0000223!4.98e-11!59;CL:0002149!4.37e-09!6;CL:0002255!4.37e-09!6;CL:0000239!1.64e-08!3;CL:1000615!1.64e-08!3;CL:0002306!1.64e-08!3;CL:0002621!1.64e-08!3;CL:0000313!2.95e-07!1;CL:0002159!5.29e-07!13 | |ontology_enrichment_celltype=CL:0000244!1.46e-13!4;CL:0000731!1.46e-13!4;CL:0000066!2.51e-12!254;CL:0002076!4.70e-11!43;CL:0000223!4.98e-11!59;CL:0002149!4.37e-09!6;CL:0002255!4.37e-09!6;CL:0000239!1.64e-08!3;CL:1000615!1.64e-08!3;CL:0002306!1.64e-08!3;CL:0002621!1.64e-08!3;CL:0000313!2.95e-07!1;CL:0002159!5.29e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.23e-66;1!CL:0000159;3.61e-34;2!CL:0000244;9.45e-18;4!CL:0000731;9.45e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.23e-66,1;CL:0000159,3.61e-34,2;CL:0000244,1.03e-17,4;CL:0000731,1.03e-17,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10 | |||
|ontology_enrichment_disease=DOID:3001!4.37e-09!6;DOID:299!1.08e-07!25;DOID:305!2.92e-07!106;DOID:2152!2.95e-07!1 | |ontology_enrichment_disease=DOID:3001!4.37e-09!6;DOID:299!1.08e-07!25;DOID:305!2.92e-07!106;DOID:2152!2.95e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2152;1.23e-66;1!DOID:4468;5.96e-34;2!DOID:299;1.06e-11;25!DOID:120;6.40e-11;27!DOID:193;3.03e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.23e-66,1;DOID:4468,5.04e-34,2;DOID:299,1.03e-11,25;DOID:120,6.25e-11,27;DOID:193,2.96e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0000365!2.78e-18!5;UBERON:0005910!2.92e-15!6;UBERON:0006853!1.64e-08!3;UBERON:0007685!1.64e-08!3;UBERON:0004134!1.64e-08!3;UBERON:0001949!1.64e-08!3;UBERON:0004911!2.95e-07!1;UBERON:0004913!5.89e-07!1;UBERON:0003703!5.89e-07!1;UBERON:0001174!5.89e-07!1;UBERON:0004914!5.89e-07!1 | |ontology_enrichment_uberon=UBERON:0000365!2.78e-18!5;UBERON:0005910!2.92e-15!6;UBERON:0006853!1.64e-08!3;UBERON:0007685!1.64e-08!3;UBERON:0004134!1.64e-08!3;UBERON:0001949!1.64e-08!3;UBERON:0004911!2.95e-07!1;UBERON:0004913!5.89e-07!1;UBERON:0003703!5.89e-07!1;UBERON:0001174!5.89e-07!1;UBERON:0004914!5.89e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.23e-66;1!UBERON:0004909;3.61e-34;2!UBERON:0000365;1.71e-14;5!UBERON:0005910;2.59e-12;6!UBERON:0000486;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.23e-66,1;UBERON:0004909,3.61e-34,2;UBERON:0000365,1.83e-14,5;UBERON:0005910,2.74e-12,6 | |||
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|short_description=p7@XDH | |short_description=p7@XDH | ||
}} | }} |
Latest revision as of 22:53, 16 September 2015
Short description: | p7@XDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_XDH_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | -205bp_to_NM_000379, uc002rnv.1_5end |
EntrezGene: | XDH |
HGNC: | 12805 |
UniProt: | P47989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.23e-66 | 1 |
seromucus secreting cell | 3.61e-34 | 2 |
transitional epithelial cell | 1.03e-17 | 4 |
urothelial cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.23e-66 | 1 |
epithelium of gonad | 3.61e-34 | 2 |
urothelium | 1.83e-14 | 5 |
transitional epithelium | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.23e-66 | 1 |
clear cell adenocarcinoma | 5.04e-34 | 2 |
adenocarcinoma | 1.03e-11 | 25 |
female reproductive organ cancer | 6.25e-11 | 27 |
reproductive organ cancer | 2.96e-10 | 29 |