FFCP PHASE1:Hg19::chr1:151826134..151826143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284486 | |EntrezGene=284486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26755 | |HGNC=26755 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N1Q8 | |UniProt=Q8N1Q8 | ||
|association_with_transcript=29bp_to_ENST00000368817,NM_182578,uc009wnd.2_5end | |association_with_transcript=29bp_to_ENST00000368817,NM_182578,uc009wnd.2_5end | ||
|cluster_id=chr1:151826134..151826143,- | |||
|coexpression_cluster_id=C441 | |coexpression_cluster_id=C441 | ||
|description=CAGE_peak_2_at_THEM5_5end | |description=CAGE_peak_2_at_THEM5_5end | ||
|id=chr1:151826134..151826143,- | |id=chr1:151826134..151826143,- | ||
|ontology_enrichment_celltype=CL:0002150!2.75e-19!3;CL:0000861!2.75e-19!3;CL:0000764!5.51e-14!2;CL:0000765!5.51e-14!2;CL:0000050!5.51e-14!2;CL:0000038!5.51e-14!2;CL:0000558!5.51e-14!2;CL:0000547!5.51e-14!2;CL:0000549!5.51e-14!2;CL:0000550!5.51e-14!2;CL:0000552!5.51e-14!2;CL:0002623!1.98e-09!3 | |ontology_enrichment_celltype=CL:0002150!2.75e-19!3;CL:0000861!2.75e-19!3;CL:0000764!5.51e-14!2;CL:0000765!5.51e-14!2;CL:0000050!5.51e-14!2;CL:0000038!5.51e-14!2;CL:0000558!5.51e-14!2;CL:0000547!5.51e-14!2;CL:0000549!5.51e-14!2;CL:0000550!5.51e-14!2;CL:0000552!5.51e-14!2;CL:0002623!1.98e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.84e-66;2!CL:0000558;2.84e-66;2!CL:0002623;2.07e-12;3!CL:0000622;5.73e-08;5!CL:0000154;7.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.84e-66,2;CL:0000765,2.84e-66,2;CL:0000050,2.84e-66,2;CL:0000038,2.84e-66,2;CL:0000558,2.84e-66,2;CL:0000547,2.84e-66,2;CL:0000549,2.84e-66,2;CL:0000550,2.84e-66,2;CL:0000552,2.84e-66,2;CL:0002623,2.07e-12,3;CL:0000622,5.73e-08,5;CL:0000154,7.58e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!6.59e-08!1;DOID:3149!6.59e-08!1 | |ontology_enrichment_disease=DOID:3151!6.59e-08!1;DOID:3149!6.59e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.84e-34;1!DOID:3149;1.84e-34;1!DOID:3451;5.48e-18;2!DOID:4159;5.48e-18;2!DOID:0060122;5.48e-18;2!DOID:4362;7.25e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.84e-34,1;DOID:3149,1.84e-34,1;DOID:3451,5.48e-18,2;DOID:4159,5.48e-18,2;DOID:0060122,5.48e-18,2;DOID:4362,7.01e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000166!2.78e-10!21;UBERON:0001723!1.74e-09!3;UBERON:0001033!1.74e-09!3;UBERON:0010056!1.74e-09!3;UBERON:0007023!1.03e-08!115;UBERON:0000078!1.46e-08!18;UBERON:0000997!9.71e-08!1;UBERON:0005056!9.71e-08!1;UBERON:0007029!1.33e-07!1;UBERON:0000165!1.45e-07!28;UBERON:0000930!1.45e-07!28;UBERON:0002372!2.21e-07!1;UBERON:0001961!2.21e-07!1;UBERON:0001744!2.21e-07!1;UBERON:0001735!2.21e-07!1;UBERON:0002022!2.35e-07!1;UBERON:0000014!2.50e-07!4;UBERON:0002902!3.40e-07!1;UBERON:0009899!3.40e-07!1;UBERON:0002336!3.62e-07!1;UBERON:0001018!3.62e-07!1;UBERON:0002473!3.62e-07!1;UBERON:0005340!3.62e-07!1;UBERON:0002316!3.62e-07!1;UBERON:0003544!3.62e-07!1;UBERON:0001020!3.62e-07!1;UBERON:0005970!3.62e-07!1;UBERON:0002437!3.62e-07!1;UBERON:0002581!4.09e-07!1;UBERON:0001950!9.10e-07!20 | |ontology_enrichment_uberon=UBERON:0000166!2.78e-10!21;UBERON:0001723!1.74e-09!3;UBERON:0001033!1.74e-09!3;UBERON:0010056!1.74e-09!3;UBERON:0007023!1.03e-08!115;UBERON:0000078!1.46e-08!18;UBERON:0000997!9.71e-08!1;UBERON:0005056!9.71e-08!1;UBERON:0007029!1.33e-07!1;UBERON:0000165!1.45e-07!28;UBERON:0000930!1.45e-07!28;UBERON:0002372!2.21e-07!1;UBERON:0001961!2.21e-07!1;UBERON:0001744!2.21e-07!1;UBERON:0001735!2.21e-07!1;UBERON:0002022!2.35e-07!1;UBERON:0000014!2.50e-07!4;UBERON:0002902!3.40e-07!1;UBERON:0009899!3.40e-07!1;UBERON:0002336!3.62e-07!1;UBERON:0001018!3.62e-07!1;UBERON:0002473!3.62e-07!1;UBERON:0005340!3.62e-07!1;UBERON:0002316!3.62e-07!1;UBERON:0003544!3.62e-07!1;UBERON:0001020!3.62e-07!1;UBERON:0005970!3.62e-07!1;UBERON:0002437!3.62e-07!1;UBERON:0002581!4.09e-07!1;UBERON:0001950!9.10e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;3.06e-12;3!UBERON:0001033;3.06e-12;3!UBERON:0000014;1.12e-09;4!UBERON:0001044;7.58e-07;6!UBERON:0003293;7.58e-07;6!UBERON:0003294;7.58e-07;6!UBERON:0010047;7.58e-07;6!UBERON:0003408;7.58e-07;6!UBERON:0000167;7.58e-07;6!UBERON:0000002;9.23e-07;6!UBERON:0001560;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.24e-12,3;UBERON:0001033,3.24e-12,3;UBERON:0010056,3.24e-12,3;UBERON:0000014,1.12e-09,4;UBERON:0000166,5.57e-07,22;UBERON:0001044,7.58e-07,6;UBERON:0003293,7.58e-07,6;UBERON:0003294,7.58e-07,6;UBERON:0010047,7.58e-07,6;UBERON:0000167,7.58e-07,6;UBERON:0000002,8.97e-07,6;UBERON:0001560,8.97e-07,6 | |||
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|short_description=p2@THEM5 | |short_description=p2@THEM5 | ||
}} | }} |
Latest revision as of 01:50, 17 September 2015
Short description: | p2@THEM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_THEM5_5end |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | 29bp_to_ENST00000368817, NM_182578, uc009wnd.2_5end |
EntrezGene: | THEM5 |
HGNC: | 26755 |
UniProt: | Q8N1Q8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.84e-66 | 2 |
erythroblast | 2.84e-66 | 2 |
megakaryocyte-erythroid progenitor cell | 2.84e-66 | 2 |
erythroid progenitor cell | 2.84e-66 | 2 |
reticulocyte | 2.84e-66 | 2 |
proerythroblast | 2.84e-66 | 2 |
basophilic erythroblast | 2.84e-66 | 2 |
polychromatophilic erythroblast | 2.84e-66 | 2 |
orthochromatic erythroblast | 2.84e-66 | 2 |
acinar cell of salivary gland | 2.07e-12 | 3 |
acinar cell | 5.73e-08 | 5 |
protein secreting cell | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tongue | 3.24e-12 | 3 |
gustatory system | 3.24e-12 | 3 |
future tongue | 3.24e-12 | 3 |
zone of skin | 1.12e-09 | 4 |
oral opening | 5.57e-07 | 22 |
saliva-secreting gland | 7.58e-07 | 6 |
gland of oral region | 7.58e-07 | 6 |
gland of foregut | 7.58e-07 | 6 |
oral gland | 7.58e-07 | 6 |
oral cavity | 7.58e-07 | 6 |
uterine cervix | 8.97e-07 | 6 |
neck of organ | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.84e-34 | 1 |
keratoacanthoma | 1.84e-34 | 1 |
skin carcinoma | 5.48e-18 | 2 |
skin cancer | 5.48e-18 | 2 |
integumentary system cancer | 5.48e-18 | 2 |
cervical cancer | 7.01e-08 | 5 |