FFCP PHASE1:Hg19::chr1:25291678..25291685,-: Difference between revisions
From FANTOM5_SSTAR
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=864 | |EntrezGene=864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |HGNC=10473 | ||
|TSSclassifier=strong | |||
|UniProt=O14814 | |UniProt=O14814 | ||
|association_with_transcript=-66bp_to_ENST00000479341,uc009vrl.1_5end | |||
|cluster_id=chr1:25291678..25291685,- | |||
|description=CAGE_peak_8_at_RUNX3_5end | |||
|id=chr1:25291678..25291685,- | |||
|ontology_enrichment_celltype=CL:0002087!6.88e-39!119;CL:0000738!6.18e-34!140;CL:0002031!2.32e-33!124;CL:0000037!9.06e-32!172;CL:0000566!9.06e-32!172;CL:0000988!2.36e-31!182;CL:0002032!7.81e-31!165;CL:0000837!7.81e-31!165;CL:0000542!2.02e-30!53;CL:0000051!2.02e-30!53;CL:0000838!2.68e-29!52;CL:0000084!1.44e-14!25;CL:0000827!1.44e-14!25;CL:0000945!2.01e-13!24;CL:0000826!2.01e-13!24;CL:0002320!3.21e-12!365;CL:0000134!5.02e-12!358;CL:0000791!8.64e-12!18;CL:0000789!8.64e-12!18;CL:0002420!8.64e-12!18;CL:0002419!8.64e-12!18;CL:0000790!8.64e-12!18;CL:0002057!1.11e-11!42;CL:0002009!1.33e-10!65;CL:0000860!2.06e-10!45;CL:0002194!2.41e-10!63;CL:0000576!2.41e-10!63;CL:0000040!2.41e-10!63;CL:0000559!2.41e-10!63;CL:0000557!6.88e-10!71;CL:0000219!1.49e-09!390;CL:0000839!1.79e-08!70;CL:0000763!4.88e-08!112;CL:0000049!4.88e-08!112;CL:0000766!3.53e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.70e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.81e-08,53;CL:0000051,6.81e-08,53;CL:0000945,2.49e-07,24;CL:0000826,2.49e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!7.89e-08!51;DOID:0060083!7.89e-08!51;DOID:0060058!9.39e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.10e-22!102;UBERON:0003061!5.10e-22!102;UBERON:0002193!1.18e-20!112;UBERON:0004765!2.88e-15!101;UBERON:0001434!2.88e-15!101;UBERON:0001474!5.52e-13!86;UBERON:0002384!9.99e-13!375;UBERON:0002371!1.01e-11!80;UBERON:0002405!2.59e-10!115;UBERON:0000178!4.22e-08!15;UBERON:0000179!4.22e-08!15;UBERON:0000463!4.22e-08!15;UBERON:0004177!2.44e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;9.53e-13;18!UBERON:0004765;1.51e-08;26!UBERON:0002390;5.11e-07;32!UBERON:0002371;7.85e-07;12 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,1.31360943119913,2.44003422072406,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.581592955118259,0.377875943688809,0.970336244751265,0.464858073811369,0,0.619412741790207,0,0.768482119587302,0,0.689491361473237,0.645484683583826,0,0.941211697713023,1.36453075028923,0.224723484445085,0.306083892370903,0.641858054152187,0,1.64925650093358,0.598390972864896,0.426224750532694,0,0,0.622822248995575,0.75374599577023,1.5644487552606,0.65156653411535,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,1.76171156811282,0.382273228125229,1.32171328579026,1.12101712596307,0,2.75393678159366,0.393010762749165,0.205601498999509,1.17030546773475,0.32592226663359,0,1.94826728407911,0.779873198196215,0.294605907474837,0,0,0.640456598628376,1.04047478047903,0.986627427622057,1.38175008892924,1.15921234294021,1.92772532110679,2.1403266247177,3.1360657141493,0.679856056185397,0.383220493601921,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.602300476311091,0.639933055772092,1.24930726552346,0.947109008176067,0,0.604820229674197,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.619954687054593,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0.831192346452549,0.877955241761676,0.30648779579902,0.45071417671979,0,1.07633781413317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,1.0656887160644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0.315404830067869,0,0.902838299183157,0,0,0,0.184369168541703,0,0,0,0.82707210449155,0,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09883357782012,1.15513299888823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.714695326373367,0.411362273086194,0,1.08006287447623,3.17250070517708,0,0,0,1.11481905075431,0,0.995985806877798,0.318852545457645,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0.677167111206413,0,0.201799707191048,2.55507742614196,0.343505344755765,0.307240764308458,0.894704431569664,0.834245708559542,0.390776190804081,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,3.32328974744888,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0.593042257361244,0.123563938946503,0.313265848516366,0.067401132980677,0,0,0.91227394607833,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509991088181609,0.577901179803038,0,0,1.27746588066972,0,1.31443677139657,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0.60896299190448,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0.285465333544967,0.470531639396343,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0.327130788511688,0.327609848846413,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,1.21023041222112,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.469919589899268,0.257831551894309,1.79894080664872,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.452122368852043,0.372448285775147,0,0,0,0.217716747896961,0,1.68380132536469,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.805095174364105,0.641136984606466 | 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| ||
|short_description=p8@RUNX3 | |||
}} | }} |
Latest revision as of 02:44, 17 September 2015
Short description: | p8@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RUNX3_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_ENST00000479341, uc009vrl.1_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | O14814 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.81e-08 | 53 |
common lymphoid progenitor | 6.81e-08 | 53 |
lymphocyte of B lineage | 2.49e-07 | 24 |
pro-B cell | 2.49e-07 | 24 |