FFCP PHASE1:Hg19::chr4:1857954..1857971,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3954 | |EntrezGene=3954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6556 | |HGNC=6556 | ||
|TSSclassifier=strong | |||
|UniProt=O95202 | |UniProt=O95202 | ||
|association_with_transcript=2bp_to_ENST00000302787,NM_012318,uc003gdv.2,uc011bvg.1_5end | |association_with_transcript=2bp_to_ENST00000302787,NM_012318,uc003gdv.2,uc011bvg.1_5end | ||
|cluster_id=chr4:1857954..1857971,- | |||
|description=CAGE_peak_2_at_LETM1_5end | |description=CAGE_peak_2_at_LETM1_5end | ||
|id=chr4:1857954..1857971,- | |id=chr4:1857954..1857971,- | ||
|ontology_enrichment_celltype=CL:0002139!2.69e-08!24 | |ontology_enrichment_celltype=CL:0002139!2.69e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.69e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.83e-09,24;CL:0000071,7.54e-07,18;CL:0002546,7.54e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.89e-10!79;UBERON:0007798!2.89e-10!79;UBERON:0000055!3.02e-09!69;UBERON:0004535!3.73e-08!110;UBERON:0001009!6.57e-08!113;UBERON:0001981!6.42e-07!60;UBERON:0007500!6.42e-07!60;UBERON:0004537!6.42e-07!60;UBERON:0006965!6.42e-07!60 | |ontology_enrichment_uberon=UBERON:0002049!2.89e-10!79;UBERON:0007798!2.89e-10!79;UBERON:0000055!3.02e-09!69;UBERON:0004535!3.73e-08!110;UBERON:0001009!6.57e-08!113;UBERON:0001981!6.42e-07!60;UBERON:0007500!6.42e-07!60;UBERON:0004537!6.42e-07!60;UBERON:0006965!6.42e-07!60 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.60e-08,68;UBERON:0002049,8.58e-08,78;UBERON:0007798,8.58e-08,78;UBERON:0004638,7.54e-07,18;UBERON:0001986,7.54e-07,18;UBERON:0004852,7.54e-07,18 | |||
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| ||
|short_description=p2@LETM1 | |short_description=p2@LETM1 | ||
}} | }} |
Latest revision as of 02:51, 17 September 2015
Short description: | p2@LETM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LETM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000302787, NM_012318, uc003gdv.2, uc011bvg.1_5end |
EntrezGene: | LETM1 |
HGNC: | 6556 |
UniProt: | O95202 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.83e-09 | 24 |
blood vessel endothelial cell | 7.54e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.54e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.60e-08 | 68 |
vasculature | 8.58e-08 | 78 |
vascular system | 8.58e-08 | 78 |
blood vessel endothelium | 7.54e-07 | 18 |
endothelium | 7.54e-07 | 18 |
cardiovascular system endothelium | 7.54e-07 | 18 |