FFCP PHASE1:Hg19::chr6:21597600..21597664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6659 | |EntrezGene=6659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11200 | |HGNC=11200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AJ420500_5end | |association_with_transcript=0bp_to_AJ420500_5end | ||
|cluster_id=chr6:21597600..21597664,+ | |||
|coexpression_cluster_id=C1086 | |||
|description=CAGE_peak_3_at_SOX4_5end | |description=CAGE_peak_3_at_SOX4_5end | ||
|id=chr6:21597600..21597664,+ | |id=chr6:21597600..21597664,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.84e-17!254;CL:0002321!4.55e-07!248 | |ontology_enrichment_celltype=CL:0000066!1.84e-17!254;CL:0002321!4.55e-07!248 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.56e-16,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.10e-15!235;DOID:14566!8.06e-15!239;DOID:0050687!1.51e-12!143;DOID:305!1.79e-10!106;DOID:0050686!4.66e-10!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.97e-14,235;DOID:14566,2.59e-13,239;DOID:0050687,3.97e-11,143;DOID:0050686,2.25e-10,137;DOID:305,1.42e-09,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.97e-07;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@SOX4 | |short_description=p3@SOX4 | ||
}} | }} |
Latest revision as of 03:56, 17 September 2015
Short description: | p3@SOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SOX4_5end |
Coexpression cluster: | C1086_occipital_parietal_temporal_duodenum_small_Neurons_transitionalcell |
Association with transcript: | 0bp_to_AJ420500_5end |
EntrezGene: | SOX4 |
HGNC: | 11200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.56e-16 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.97e-14 | 235 |
disease of cellular proliferation | 2.59e-13 | 239 |
cell type cancer | 3.97e-11 | 143 |
organ system cancer | 2.25e-10 | 137 |
carcinoma | 1.42e-09 | 106 |